RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 NOVA2Q9UNW9 492 aaKnown RBP11.78□□□□□ -0.52
CDH11-216ENST00000569128 SCAPERQ9BY12 1400 aa11.77□□□□□ -0.52
CDH11-216ENST00000569128 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.52
CDH11-216ENST00000569128 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
CDH11-216ENST00000569128 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
CDH11-216ENST00000569128 GTF2IP78347 998 aa11.77□□□□□ -0.53
CDH11-216ENST00000569128 PTK7Q13308 1070 aa11.77□□□□□ -0.53
CDH11-216ENST00000569128 AFAP1Q8N556 730 aa11.77□□□□□ -0.53
CDH11-216ENST00000569128 DNAAF2Q9NVR5 837 aaKnown RBP11.77□□□□□ -0.53
CDH11-216ENST00000569128 DAPK1P53355 1430 aa11.77□□□□□ -0.53
CDH11-216ENST00000569128 ABCC1P33527 1531 aa11.76□□□□□ -0.53
CDH11-216ENST00000569128 SCTRP47872 440 aa11.76□□□□□ -0.53
CDH11-216ENST00000569128 NR5A1Q13285 461 aa11.76□□□□□ -0.53
CDH11-216ENST00000569128 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
CDH11-216ENST00000569128 STK32AQ8WU08 396 aa11.76□□□□□ -0.53
CDH11-216ENST00000569128 SIRT1Q96EB6 747 aa11.76□□□□□ -0.53
CDH11-216ENST00000569128 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
CDH11-216ENST00000569128 RAPGEF3O95398 923 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 NR3C2P08235 984 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
CDH11-216ENST00000569128 CCDC116Q8IYX3 515 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 USTQ9Y2C2 406 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 NEO1Q92859 1461 aa11.75□□□□□ -0.53
CDH11-216ENST00000569128 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
CDH11-216ENST00000569128 MYCP01106 439 aaPredicted RBP11.74□□□□□ -0.53
CDH11-216ENST00000569128 CYLDQ9NQC7 956 aa11.74□□□□□ -0.53
CDH11-216ENST00000569128 RRP7BPQ9NSQ0 103 aa11.74□□□□□ -0.53
CDH11-216ENST00000569128 KIAA1024Q9UPX6 916 aa11.74□□□□□ -0.53
CDH11-216ENST00000569128 PCDHGA11Q9Y5H2 935 aa11.74□□□□□ -0.53
CDH11-216ENST00000569128 PLEKHH2Q8IVE3 1493 aa11.74□□□□□ -0.53
CDH11-216ENST00000569128 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
CDH11-216ENST00000569128 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
CDH11-216ENST00000569128 PSME1Q06323 249 aa11.73□□□□□ -0.53
CDH11-216ENST00000569128 PPP1R26Q5T8A7 1209 aaPredicted RBP11.73□□□□□ -0.53
CDH11-216ENST00000569128 TMEM164Q5U3C3 297 aa11.73□□□□□ -0.53
CDH11-216ENST00000569128 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
CDH11-216ENST00000569128 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
CDH11-216ENST00000569128 SNIP1Q8TAD8 396 aaKnown RBP11.73□□□□□ -0.53
CDH11-216ENST00000569128 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
CDH11-216ENST00000569128 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
CDH11-216ENST00000569128 WASF2Q9Y6W5 498 aa11.73□□□□□ -0.53
CDH11-216ENST00000569128 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 CFAP74Q9C0B2 1584 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 CCDC141Q6ZP82 1450 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 TEX14Q8IWB6 1497 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 TMEM88BA6NKF7 163 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 GDF9O60383 454 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 ERVK-9P63128 1117 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 DPYDQ12882 1025 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 LARGE2Q8N3Y3 721 aa11.72□□□□□ -0.53
CDH11-216ENST00000569128 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.53
CDH11-216ENST00000569128 TSPY4P0CV99 314 aa11.71□□□□□ -0.53
CDH11-216ENST00000569128 TSPY10P0CW01 314 aa11.71□□□□□ -0.53
CDH11-216ENST00000569128 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.53
CDH11-216ENST00000569128 DENND4BO75064 1496 aaPredicted RBP11.7□□□□□ -0.54
CDH11-216ENST00000569128 C9orf84Q5VXU9 1444 aa11.7□□□□□ -0.54
CDH11-216ENST00000569128 J3QL48 77 aa11.7□□□□□ -0.54
CDH11-216ENST00000569128 NNTQ13423 1086 aa11.7□□□□□ -0.54
CDH11-216ENST00000569128 CCDC102BQ68D86 513 aa11.7□□□□□ -0.54
CDH11-216ENST00000569128 CYP4X1Q8N118 509 aa11.7□□□□□ -0.54
CDH11-216ENST00000569128 TPCN2Q8NHX9 752 aa11.7□□□□□ -0.54
CDH11-216ENST00000569128 POGZQ7Z3K3 1410 aa11.69□□□□□ -0.54
CDH11-216ENST00000569128 CROCC2H7BZ55 1655 aa11.69□□□□□ -0.54
CDH11-216ENST00000569128 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
CDH11-216ENST00000569128 LILRA1O75019 489 aa11.69□□□□□ -0.54
CDH11-216ENST00000569128 MYT1Q01538 1121 aa11.69□□□□□ -0.54
CDH11-216ENST00000569128 SIX5Q8N196 739 aa11.69□□□□□ -0.54
CDH11-216ENST00000569128 OSBPL3Q9H4L5 887 aa11.69□□□□□ -0.54
CDH11-216ENST00000569128 DKK1O94907 266 aa11.68□□□□□ -0.54
CDH11-216ENST00000569128 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
CDH11-216ENST00000569128 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
CDH11-216ENST00000569128 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
CDH11-216ENST00000569128 NCOA1Q15788 1441 aa11.68□□□□□ -0.54
CDH11-216ENST00000569128 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
CDH11-216ENST00000569128 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
CDH11-216ENST00000569128 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
CDH11-216ENST00000569128 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
CDH11-216ENST00000569128 RICTORQ6R327 1708 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 ZNF518AQ6AHZ1 1483 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 SFI1A8K8P3 1242 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 KCNA1Q09470 495 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 TOR4AQ9NXH8 423 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 NAIPQ13075 1403 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 MAST1Q9Y2H9 1570 aa11.66□□□□□ -0.54
CDH11-216ENST00000569128 ADGRL2O95490 1459 aa11.65□□□□□ -0.54
CDH11-216ENST00000569128 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
CDH11-216ENST00000569128 ADD1P35611 737 aaKnown RBP11.65□□□□□ -0.54
CDH11-216ENST00000569128 RBM25P49756 843 aaKnown RBP11.65□□□□□ -0.54
CDH11-216ENST00000569128 SEC13P55735 322 aa11.65□□□□□ -0.54
CDH11-216ENST00000569128 TRIM52Q96A61 297 aa11.65□□□□□ -0.54
CDH11-216ENST00000569128 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.54
CDH11-216ENST00000569128 ROCK1Q13464 1354 aa11.65□□□□□ -0.55
CDH11-216ENST00000569128 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.55
CDH11-216ENST00000569128 KDM6BO15054 1643 aa11.64□□□□□ -0.55
CDH11-216ENST00000569128 KDM5CP41229 1560 aa11.64□□□□□ -0.55
CDH11-216ENST00000569128 SMPD1P17405 629 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms