RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 CANXP27824 592 aaKnown RBP33.54■■■□□ 2.96
CCNF-205ENST00000569093 FKBP8Q14318 412 aa33.54■■■□□ 2.96
CCNF-205ENST00000569093 YBX3P16989 372 aaKnown RBP eCLIP33.53■■■□□ 2.96
CCNF-205ENST00000569093 NFE2L2Q16236 605 aa33.52■■■□□ 2.96
CCNF-205ENST00000569093 USPL1Q5W0Q7 1092 aa33.51■■■□□ 2.95
CCNF-205ENST00000569093 PNNQ9H307 717 aaKnown RBP33.51■■■□□ 2.95
CCNF-205ENST00000569093 ZPR1O75312 459 aa33.5■■■□□ 2.95
CCNF-205ENST00000569093 TEX13AQ9BXU3 409 aaPredicted RBP33.5■■■□□ 2.95
CCNF-205ENST00000569093 MAPK8IP3Q9UPT6 1336 aa33.5■■■□□ 2.95
CCNF-205ENST00000569093 COL15A1P39059 1388 aa33.49■■■□□ 2.95
CCNF-205ENST00000569093 PRKRIP1Q9H875 184 aaPredicted RBP33.49■■■□□ 2.95
CCNF-205ENST00000569093 MIS18AQ9NYP9 233 aa33.49■■■□□ 2.95
CCNF-205ENST00000569093 WWC3Q9ULE0 1092 aa33.49■■■□□ 2.95
CCNF-205ENST00000569093 PARP3Q9Y6F1 533 aa33.49■■■□□ 2.95
CCNF-205ENST00000569093 CHD4Q14839 1912 aa33.48■■■□□ 2.95
CCNF-205ENST00000569093 TAF7Q15545 349 aaPredicted RBP33.48■■■□□ 2.95
CCNF-205ENST00000569093 THUMPD2Q9BTF0 503 aaKnown RBP33.47■■■□□ 2.95
CCNF-205ENST00000569093 NARFQ9UHQ1 456 aa33.47■■■□□ 2.95
CCNF-205ENST00000569093 PRAMEF22A3QJZ6 481 aa33.46■■■□□ 2.95
CCNF-205ENST00000569093 A1BGP04217 495 aa33.46■■■□□ 2.95
CCNF-205ENST00000569093 EIF5P55010 431 aaKnown RBP33.46■■■□□ 2.95
CCNF-205ENST00000569093 DDR1Q08345 913 aa33.46■■■□□ 2.95
CCNF-205ENST00000569093 USP16Q9Y5T5 823 aa33.45■■■□□ 2.95
CCNF-205ENST00000569093 KIF13BQ9NQT8 1826 aa33.44■■■□□ 2.94
CCNF-205ENST00000569093 TM4SF1P30408 202 aa33.43■■■□□ 2.94
CCNF-205ENST00000569093 BCL2L12Q9HB09 334 aa33.43■■■□□ 2.94
CCNF-205ENST00000569093 ZNF330Q9Y3S2 320 aaPredicted RBP33.42■■■□□ 2.94
CCNF-205ENST00000569093 C10orf71Q711Q0 1435 aa33.42■■■□□ 2.94
CCNF-205ENST00000569093 GRIN3BO60391 1043 aa33.41■■■□□ 2.94
CCNF-205ENST00000569093 N4BP2Q86UW6 1770 aaPredicted RBP33.4■■■□□ 2.94
CCNF-205ENST00000569093 SNRPA1P09661 255 aaKnown RBP33.4■■■□□ 2.94
CCNF-205ENST00000569093 CCDC146Q8IYE0 955 aa33.4■■■□□ 2.94
CCNF-205ENST00000569093 KIAA1551Q9HCM1 1747 aa33.39■■■□□ 2.94
CCNF-205ENST00000569093 A0A0G2JLW4 131 aa33.39■■■□□ 2.94
CCNF-205ENST00000569093 POLRMTO00411 1230 aaKnown RBP33.39■■■□□ 2.94
CCNF-205ENST00000569093 PIP4K2AP48426 406 aaPredicted RBP33.39■■■□□ 2.94
CCNF-205ENST00000569093 RIPK4P57078 832 aa33.39■■■□□ 2.94
CCNF-205ENST00000569093 PXDNLA1KZ92 1463 aa33.38■■■□□ 2.93
CCNF-205ENST00000569093 IL6STP40189 918 aaPredicted RBP33.38■■■□□ 2.93
CCNF-205ENST00000569093 NFIXQ14938 502 aa33.38■■■□□ 2.93
CCNF-205ENST00000569093 TBC1D2BQ9UPU7 963 aa33.38■■■□□ 2.93
CCNF-205ENST00000569093 A0A087WZG4 1122 aa33.37■■■□□ 2.93
CCNF-205ENST00000569093 TGFB2P61812 414 aa33.37■■■□□ 2.93
CCNF-205ENST00000569093 WDR43Q15061 677 aaKnown RBP eCLIP33.37■■■□□ 2.93
CCNF-205ENST00000569093 TMPOP42166 694 aaKnown RBP33.36■■■□□ 2.93
CCNF-205ENST00000569093 ADAMTS8Q9UP79 889 aa33.36■■■□□ 2.93
CCNF-205ENST00000569093 DPEP1P16444 411 aa33.35■■■□□ 2.93
CCNF-205ENST00000569093 PNISRQ8TF01 805 aaKnown RBP33.35■■■□□ 2.93
CCNF-205ENST00000569093 RRP7AQ9Y3A4 280 aaKnown RBP33.35■■■□□ 2.93
CCNF-205ENST00000569093 KDM3BQ7LBC6 1761 aa33.34■■■□□ 2.93
CCNF-205ENST00000569093 ZNF316A6NFI3 1004 aaPredicted RBP33.32■■■□□ 2.92
CCNF-205ENST00000569093 NEUROD2Q15784 382 aa33.32■■■□□ 2.92
CCNF-205ENST00000569093 BICDL1Q6ZP65 573 aa33.32■■■□□ 2.92
CCNF-205ENST00000569093 AFDNP55196 1824 aaKnown RBP33.31■■■□□ 2.92
CCNF-205ENST00000569093 EIF4A1P60842 406 aaKnown RBP33.3■■■□□ 2.92
CCNF-205ENST00000569093 NPM2Q86SE8 214 aaKnown RBP33.3■■■□□ 2.92
CCNF-205ENST00000569093 ZNF784Q8NCA9 323 aaPredicted RBP33.3■■■□□ 2.92
CCNF-205ENST00000569093 RUNDC1Q96C34 613 aa33.3■■■□□ 2.92
CCNF-205ENST00000569093 NBPF26B4DH59 902 aa33.29■■■□□ 2.92
CCNF-205ENST00000569093 SERPINB2P05120 415 aa33.29■■■□□ 2.92
CCNF-205ENST00000569093 KCNA3P22001 575 aa33.29■■■□□ 2.92
CCNF-205ENST00000569093 NBPF10Q6P3W6 841 aaKnown RBP33.29■■■□□ 2.92
CCNF-205ENST00000569093 NBPF15Q8N660 670 aa33.29■■■□□ 2.92
CCNF-205ENST00000569093 TBC1D9BQ66K14 1250 aa33.28■■■□□ 2.92
CCNF-205ENST00000569093 GIGYF1O75420 1035 aaPredicted RBP33.27■■■□□ 2.92
CCNF-205ENST00000569093 CAMTA2O94983 1202 aa33.27■■■□□ 2.92
CCNF-205ENST00000569093 DZIP3Q86Y13 1208 aaKnown RBP33.27■■■□□ 2.92
CCNF-205ENST00000569093 BCS1LQ9Y276 419 aa33.27■■■□□ 2.92
CCNF-205ENST00000569093 SCN7AQ01118 1682 aa33.26■■■□□ 2.92
CCNF-205ENST00000569093 CHRNA5P30532 468 aa33.25■■■□□ 2.91
CCNF-205ENST00000569093 NRXN2Q9P2S2 1712 aa33.25■■■□□ 2.91
CCNF-205ENST00000569093 LMOD3Q0VAK6 560 aa33.24■■■□□ 2.91
CCNF-205ENST00000569093 TSPYL4Q9UJ04 414 aa33.24■■■□□ 2.91
CCNF-205ENST00000569093 BRCA1P38398 1863 aaKnown RBP33.23■■■□□ 2.91
CCNF-205ENST00000569093 LAMB4A4D0S4 1761 aa33.23■■■□□ 2.91
CCNF-205ENST00000569093 CCDC184Q52MB2 194 aa33.22■■■□□ 2.91
CCNF-205ENST00000569093 TRIM35Q9UPQ4 493 aa33.22■■■□□ 2.91
CCNF-205ENST00000569093 BCORQ6W2J9 1755 aa33.2■■■□□ 2.91
CCNF-205ENST00000569093 PIM2Q9P1W9 311 aa33.2■■■□□ 2.91
CCNF-205ENST00000569093 CARMIL3Q8ND23 1372 aa33.18■■■□□ 2.9
CCNF-205ENST00000569093 CCDC24Q8N4L8 307 aa33.17■■■□□ 2.9
CCNF-205ENST00000569093 NGEFQ8N5V2 710 aa33.17■■■□□ 2.9
CCNF-205ENST00000569093 SETDB2Q96T68 719 aa33.17■■■□□ 2.9
CCNF-205ENST00000569093 BABAM1Q9NWV8 329 aa33.15■■■□□ 2.9
CCNF-205ENST00000569093 DALRD3Q5D0E6 543 aaKnown RBP33.14■■■□□ 2.9
CCNF-205ENST00000569093 ARHGAP27Q6ZUM4 889 aa33.14■■■□□ 2.9
CCNF-205ENST00000569093 LAS1LQ9Y4W2 734 aaKnown RBP33.14■■■□□ 2.9
CCNF-205ENST00000569093 PRR5LQ6MZQ0 368 aa33.13■■■□□ 2.89
CCNF-205ENST00000569093 APAF1O14727 1248 aa33.12■■■□□ 2.89
CCNF-205ENST00000569093 MYL6BP14649 208 aa33.12■■■□□ 2.89
CCNF-205ENST00000569093 CLEC4GQ6UXB4 293 aa33.12■■■□□ 2.89
CCNF-205ENST00000569093 CHL1O00533 1208 aa33.11■■■□□ 2.89
CCNF-205ENST00000569093 HLFQ16534 295 aa33.11■■■□□ 2.89
CCNF-205ENST00000569093 C2CD5Q86YS7 1000 aa33.11■■■□□ 2.89
CCNF-205ENST00000569093 ARFGEF1Q9Y6D6 1849 aa33.11■■■□□ 2.89
CCNF-205ENST00000569093 ANKRD31Q8N7Z5 1873 aa33.1■■■□□ 2.89
CCNF-205ENST00000569093 EIF2S2P20042 333 aaKnown RBP33.1■■■□□ 2.89
CCNF-205ENST00000569093 ZNF652Q9Y2D9 606 aa33.1■■■□□ 2.89
CCNF-205ENST00000569093 TTLL7Q6ZT98 887 aa33.09■■■□□ 2.89
CCNF-205ENST00000569093 KRT24Q2M2I5 525 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms