RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 DDR1Q08345 913 aa24.28■■□□□ 1.48
SYNGR3-205ENST00000568896 VIRMAQ69YN4 1812 aaKnown RBP24.28■■□□□ 1.48
SYNGR3-205ENST00000568896 KIF13BQ9NQT8 1826 aa24.28■■□□□ 1.48
SYNGR3-205ENST00000568896 C4AP0C0L4 1744 aa24.27■■□□□ 1.48
SYNGR3-205ENST00000568896 DNAJC10Q8IXB1 793 aa24.27■■□□□ 1.48
SYNGR3-205ENST00000568896 NEFMP07197 916 aa24.26■■□□□ 1.47
SYNGR3-205ENST00000568896 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
SYNGR3-205ENST00000568896 IL17REQ8NFR9 667 aa24.26■■□□□ 1.47
SYNGR3-205ENST00000568896 PNNQ9H307 717 aaKnown RBP24.26■■□□□ 1.47
SYNGR3-205ENST00000568896 USP42Q9H9J4 1324 aaKnown RBP24.26■■□□□ 1.47
SYNGR3-205ENST00000568896 CEMIPQ8WUJ3 1361 aa24.25■■□□□ 1.47
SYNGR3-205ENST00000568896 SLC39A6Q13433 755 aa24.24■■□□□ 1.47
SYNGR3-205ENST00000568896 MAPK8IP3Q9UPT6 1336 aa24.24■■□□□ 1.47
SYNGR3-205ENST00000568896 CCDC184Q52MB2 194 aa24.22■■□□□ 1.47
SYNGR3-205ENST00000568896 PIM2Q9P1W9 311 aa24.22■■□□□ 1.47
SYNGR3-205ENST00000568896 TM4SF1P30408 202 aa24.21■■□□□ 1.47
SYNGR3-205ENST00000568896 CHRNA5P30532 468 aa24.21■■□□□ 1.47
SYNGR3-205ENST00000568896 TEFQ10587 303 aa24.21■■□□□ 1.47
SYNGR3-205ENST00000568896 NFE2L2Q16236 605 aa24.21■■□□□ 1.47
SYNGR3-205ENST00000568896 ADAMTS8Q9UP79 889 aa24.21■■□□□ 1.47
SYNGR3-205ENST00000568896 TJP1Q07157 1748 aa24.21■■□□□ 1.47
SYNGR3-205ENST00000568896 C9orf131Q5VYM1 1079 aa24.2■■□□□ 1.46
SYNGR3-205ENST00000568896 USPL1Q5W0Q7 1092 aa24.2■■□□□ 1.46
SYNGR3-205ENST00000568896 RTF1Q92541 710 aaKnown RBP24.2■■□□□ 1.46
SYNGR3-205ENST00000568896 NMRK2Q9NPI5 230 aa24.2■■□□□ 1.46
SYNGR3-205ENST00000568896 SIPA1L3O60292 1781 aaPredicted RBP24.19■■□□□ 1.46
SYNGR3-205ENST00000568896 POLRMTO00411 1230 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-205ENST00000568896 HTATSF1O43719 755 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-205ENST00000568896 CYP19A1P11511 503 aaPredicted RBP24.19■■□□□ 1.46
SYNGR3-205ENST00000568896 DALRD3Q5D0E6 543 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-205ENST00000568896 MCM10Q7L590 875 aa24.19■■□□□ 1.46
SYNGR3-205ENST00000568896 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
SYNGR3-205ENST00000568896 ZPR1O75312 459 aa24.18■■□□□ 1.46
SYNGR3-205ENST00000568896 DCTN1Q14203 1278 aa24.18■■□□□ 1.46
SYNGR3-205ENST00000568896 CCDC146Q8IYE0 955 aa24.18■■□□□ 1.46
SYNGR3-205ENST00000568896 KCPQ6ZWJ8 1503 aa24.17■■□□□ 1.46
SYNGR3-205ENST00000568896 IFFO2Q5TF58 517 aa24.17■■□□□ 1.46
SYNGR3-205ENST00000568896 DLG5Q8TDM6 1919 aa24.17■■□□□ 1.46
SYNGR3-205ENST00000568896 TOMM70O94826 608 aa24.16■■□□□ 1.46
SYNGR3-205ENST00000568896 RUNDC1Q96C34 613 aa24.15■■□□□ 1.46
SYNGR3-205ENST00000568896 MRS2Q9HD23 443 aa24.15■■□□□ 1.46
SYNGR3-205ENST00000568896 ZBTB1Q9Y2K1 713 aa24.15■■□□□ 1.46
SYNGR3-205ENST00000568896 UBR2Q8IWV8 1755 aa24.14■■□□□ 1.46
SYNGR3-205ENST00000568896 BRCA1P38398 1863 aaKnown RBP24.14■■□□□ 1.45
SYNGR3-205ENST00000568896 NFIXQ14938 502 aa24.14■■□□□ 1.45
SYNGR3-205ENST00000568896 TMPOP42166 694 aaKnown RBP24.13■■□□□ 1.45
SYNGR3-205ENST00000568896 BCL2L12Q9HB09 334 aa24.13■■□□□ 1.45
SYNGR3-205ENST00000568896 NARFQ9UHQ1 456 aa24.13■■□□□ 1.45
SYNGR3-205ENST00000568896 TTC5Q8N0Z6 440 aa24.12■■□□□ 1.45
SYNGR3-205ENST00000568896 RNF181Q9P0P0 153 aa24.12■■□□□ 1.45
SYNGR3-205ENST00000568896 RIPK4P57078 832 aa24.11■■□□□ 1.45
SYNGR3-205ENST00000568896 ZNF790Q6PG37 636 aa24.11■■□□□ 1.45
SYNGR3-205ENST00000568896 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
SYNGR3-205ENST00000568896 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
SYNGR3-205ENST00000568896 APLP1P51693 650 aa24.1■■□□□ 1.45
SYNGR3-205ENST00000568896 THUMPD2Q9BTF0 503 aaKnown RBP24.1■■□□□ 1.45
SYNGR3-205ENST00000568896 RRP7AQ9Y3A4 280 aaKnown RBP24.1■■□□□ 1.45
SYNGR3-205ENST00000568896 COL15A1P39059 1388 aa24.1■■□□□ 1.45
SYNGR3-205ENST00000568896 VSIG10Q8N0Z9 540 aa24.09■■□□□ 1.45
SYNGR3-205ENST00000568896 PNISRQ8TF01 805 aaKnown RBP24.09■■□□□ 1.45
SYNGR3-205ENST00000568896 SERPINB2P05120 415 aa24.08■■□□□ 1.45
SYNGR3-205ENST00000568896 DNAJC5GQ8N7S2 189 aa24.08■■□□□ 1.45
SYNGR3-205ENST00000568896 ZNF496Q96IT1 587 aaPredicted RBP24.08■■□□□ 1.45
SYNGR3-205ENST00000568896 ARFGEF1Q9Y6D6 1849 aa24.07■■□□□ 1.44
SYNGR3-205ENST00000568896 KCNQ3O43525 872 aa24.07■■□□□ 1.44
SYNGR3-205ENST00000568896 TAF7Q15545 349 aaPredicted RBP24.07■■□□□ 1.44
SYNGR3-205ENST00000568896 HEG1Q9ULI3 1381 aa24.06■■□□□ 1.44
SYNGR3-205ENST00000568896 RASSF7Q02833 373 aa24.06■■□□□ 1.44
SYNGR3-205ENST00000568896 LMOD3Q0VAK6 560 aa24.06■■□□□ 1.44
SYNGR3-205ENST00000568896 NEUROD2Q15784 382 aa24.06■■□□□ 1.44
SYNGR3-205ENST00000568896 RRAGCQ9HB90 399 aa24.06■■□□□ 1.44
SYNGR3-205ENST00000568896 BICDL1Q6ZP65 573 aa24.05■■□□□ 1.44
SYNGR3-205ENST00000568896 RBM46Q8TBY0 533 aaKnown RBP24.05■■□□□ 1.44
SYNGR3-205ENST00000568896 EIF5P55010 431 aaKnown RBP24.04■■□□□ 1.44
SYNGR3-205ENST00000568896 HTRA3P83110 453 aa24.04■■□□□ 1.44
SYNGR3-205ENST00000568896 C16orf71Q8IYS4 520 aaPredicted RBP24.04■■□□□ 1.44
SYNGR3-205ENST00000568896 FMNL2Q96PY5 1086 aa24.04■■□□□ 1.44
SYNGR3-205ENST00000568896 KDM2BQ8NHM5 1336 aa24.04■■□□□ 1.44
SYNGR3-205ENST00000568896 APAF1O14727 1248 aa24.03■■□□□ 1.44
SYNGR3-205ENST00000568896 STARD3NLO95772 234 aa24.03■■□□□ 1.44
SYNGR3-205ENST00000568896 PRELPP51888 382 aa24.03■■□□□ 1.44
SYNGR3-205ENST00000568896 C2CD5Q86YS7 1000 aa24.03■■□□□ 1.44
SYNGR3-205ENST00000568896 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
SYNGR3-205ENST00000568896 MIS18AQ9NYP9 233 aa24.02■■□□□ 1.44
SYNGR3-205ENST00000568896 CARMIL3Q8ND23 1372 aa24.02■■□□□ 1.44
SYNGR3-205ENST00000568896 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
SYNGR3-205ENST00000568896 TBC1D9BQ66K14 1250 aa24■■□□□ 1.43
SYNGR3-205ENST00000568896 TTLL6Q8N841 843 aa24■■□□□ 1.43
SYNGR3-205ENST00000568896 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
SYNGR3-205ENST00000568896 CCDC24Q8N4L8 307 aa23.99■■□□□ 1.43
SYNGR3-205ENST00000568896 TBC1D2BQ9UPU7 963 aa23.99■■□□□ 1.43
SYNGR3-205ENST00000568896 ZNF330Q9Y3S2 320 aaPredicted RBP23.99■■□□□ 1.43
SYNGR3-205ENST00000568896 A0A087WZG4 1122 aa23.98■■□□□ 1.43
SYNGR3-205ENST00000568896 H0YIN7 160 aa23.98■■□□□ 1.43
SYNGR3-205ENST00000568896 FSTL1Q12841 308 aa23.98■■□□□ 1.43
SYNGR3-205ENST00000568896 A1BGP04217 495 aa23.97■■□□□ 1.43
SYNGR3-205ENST00000568896 LMNB1P20700 586 aa23.97■■□□□ 1.43
SYNGR3-205ENST00000568896 TEX13AQ9BXU3 409 aaPredicted RBP23.97■■□□□ 1.43
SYNGR3-205ENST00000568896 NRXN2Q9P2S2 1712 aa23.97■■□□□ 1.43
SYNGR3-205ENST00000568896 PRAMEF22A3QJZ6 481 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms