RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 FLIIQ13045 1269 aa8.66□□□□□ -1.02
CDH13-211ENST00000568770 POM121Q96HA1 1249 aa8.66□□□□□ -1.02
CDH13-211ENST00000568770 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
CDH13-211ENST00000568770 C1orf167Q5SNV9 1468 aa8.65□□□□□ -1.02
CDH13-211ENST00000568770 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.65□□□□□ -1.03
CDH13-211ENST00000568770 ATRNO75882 1429 aa8.64□□□□□ -1.03
CDH13-211ENST00000568770 PTCH1Q13635 1447 aa8.64□□□□□ -1.03
CDH13-211ENST00000568770 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
CDH13-211ENST00000568770 NR6A1Q15406 480 aa8.64□□□□□ -1.03
CDH13-211ENST00000568770 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
CDH13-211ENST00000568770 NEXMIFQ5QGS0 1516 aa8.64□□□□□ -1.03
CDH13-211ENST00000568770 NUP155O75694 1391 aa8.63□□□□□ -1.03
CDH13-211ENST00000568770 CLTCL1P53675 1640 aa8.63□□□□□ -1.03
CDH13-211ENST00000568770 ZNF326Q5BKZ1 582 aaKnown RBP8.63□□□□□ -1.03
CDH13-211ENST00000568770 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
CDH13-211ENST00000568770 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
CDH13-211ENST00000568770 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
CDH13-211ENST00000568770 ORAI2Q96SN7 254 aa8.63□□□□□ -1.03
CDH13-211ENST00000568770 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
CDH13-211ENST00000568770 F12P00748 615 aaPredicted RBP8.62□□□□□ -1.03
CDH13-211ENST00000568770 PTPRNQ16849 979 aa8.62□□□□□ -1.03
CDH13-211ENST00000568770 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
CDH13-211ENST00000568770 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
CDH13-211ENST00000568770 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
CDH13-211ENST00000568770 BCL9LQ86UU0 1499 aa8.62□□□□□ -1.03
CDH13-211ENST00000568770 LRP5O75197 1615 aa8.62□□□□□ -1.03
CDH13-211ENST00000568770 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
CDH13-211ENST00000568770 GPR37L1O60883 481 aa8.61□□□□□ -1.03
CDH13-211ENST00000568770 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
CDH13-211ENST00000568770 MYOM2P54296 1465 aa8.61□□□□□ -1.03
CDH13-211ENST00000568770 GLI3P10071 1580 aa8.61□□□□□ -1.03
CDH13-211ENST00000568770 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
CDH13-211ENST00000568770 PLA2G2CQ5R387 149 aa8.6□□□□□ -1.03
CDH13-211ENST00000568770 CCDC24Q8N4L8 307 aa8.6□□□□□ -1.03
CDH13-211ENST00000568770 GDPD2Q9HCC8 539 aa8.6□□□□□ -1.03
CDH13-211ENST00000568770 TBC1D2BQ9UPU7 963 aa8.6□□□□□ -1.03
CDH13-211ENST00000568770 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
CDH13-211ENST00000568770 ROBO2Q9HCK4 1378 aa8.6□□□□□ -1.03
CDH13-211ENST00000568770 PXDNQ92626 1479 aa8.59□□□□□ -1.03
CDH13-211ENST00000568770 PPLO60437 1756 aa8.59□□□□□ -1.03
CDH13-211ENST00000568770 CCNYL3P0C7X3 344 aa8.59□□□□□ -1.03
CDH13-211ENST00000568770 KCNH2Q12809 1159 aa8.59□□□□□ -1.03
CDH13-211ENST00000568770 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
CDH13-211ENST00000568770 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
CDH13-211ENST00000568770 BLMP54132 1417 aaPredicted RBP8.59□□□□□ -1.03
CDH13-211ENST00000568770 RGPD8O14715 1765 aaPredicted RBP8.58□□□□□ -1.04
CDH13-211ENST00000568770 CTHP32929 405 aa8.58□□□□□ -1.04
CDH13-211ENST00000568770 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
CDH13-211ENST00000568770 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.58□□□□□ -1.04
CDH13-211ENST00000568770 PLCH1Q4KWH8 1693 aa8.58□□□□□ -1.04
CDH13-211ENST00000568770 CDC42BPGQ6DT37 1551 aa8.57□□□□□ -1.04
CDH13-211ENST00000568770 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
CDH13-211ENST00000568770 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
CDH13-211ENST00000568770 DEFB132Q7Z7B7 95 aa8.57□□□□□ -1.04
CDH13-211ENST00000568770 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
CDH13-211ENST00000568770 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 HFM1A2PYH4 1435 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 USP32Q8NFA0 1604 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 FOXO3O43524 673 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 ITGAEP38570 1179 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 ESCO1Q5FWF5 840 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
CDH13-211ENST00000568770 NWD2Q9ULI1 1742 aa8.56□□□□□ -1.04
CDH13-211ENST00000568770 PRAG1Q86YV5 1406 aa8.55□□□□□ -1.04
CDH13-211ENST00000568770 SLIT2O94813 1529 aa8.55□□□□□ -1.04
CDH13-211ENST00000568770 ABCA3Q99758 1704 aa8.55□□□□□ -1.04
CDH13-211ENST00000568770 IRF5Q13568 498 aa8.55□□□□□ -1.04
CDH13-211ENST00000568770 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
CDH13-211ENST00000568770 FMN2Q9NZ56 1722 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 KIF1AQ12756 1690 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 ABL2P42684 1182 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 SF3B2Q13435 895 aaKnown RBP8.54□□□□□ -1.04
CDH13-211ENST00000568770 ANKLE1Q8NAG6 615 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
CDH13-211ENST00000568770 LRPPRCP42704 1394 aaKnown RBP8.53□□□□□ -1.04
CDH13-211ENST00000568770 A6NJR5 290 aa8.53□□□□□ -1.04
CDH13-211ENST00000568770 RGPD1P0DJD0 1748 aa8.53□□□□□ -1.04
CDH13-211ENST00000568770 KNDC1Q76NI1 1749 aa8.52□□□□□ -1.05
CDH13-211ENST00000568770 GGCXP38435 758 aa8.52□□□□□ -1.05
CDH13-211ENST00000568770 SEPT12Q8IYM1 358 aa8.52□□□□□ -1.05
CDH13-211ENST00000568770 BAP1Q92560 729 aa8.52□□□□□ -1.05
CDH13-211ENST00000568770 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
CDH13-211ENST00000568770 NAIPQ13075 1403 aa8.52□□□□□ -1.05
CDH13-211ENST00000568770 RAD21O60216 631 aa8.51□□□□□ -1.05
CDH13-211ENST00000568770 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
CDH13-211ENST00000568770 KRT27Q7Z3Y8 459 aa8.51□□□□□ -1.05
CDH13-211ENST00000568770 NRAPQ86VF7 1730 aa8.51□□□□□ -1.05
CDH13-211ENST00000568770 TNS1Q9HBL0 1735 aaKnown RBP8.51□□□□□ -1.05
CDH13-211ENST00000568770 SPATA31A3Q5VYP0 1347 aa8.51□□□□□ -1.05
CDH13-211ENST00000568770 A0A0G2JS52 829 aa8.5□□□□□ -1.05
CDH13-211ENST00000568770 VPS72Q15906 364 aa8.5□□□□□ -1.05
CDH13-211ENST00000568770 OCSTAMPQ9BR26 566 aa8.5□□□□□ -1.05
CDH13-211ENST00000568770 RPGRIP1LQ68CZ1 1315 aa8.5□□□□□ -1.05
CDH13-211ENST00000568770 CCDC144AA2RUR9 1427 aa8.49□□□□□ -1.05
CDH13-211ENST00000568770 APBB1O00213 710 aa8.49□□□□□ -1.05
CDH13-211ENST00000568770 TRAK2O60296 914 aa8.49□□□□□ -1.05
CDH13-211ENST00000568770 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
CDH13-211ENST00000568770 KRT28Q7Z3Y7 464 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms