RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 NFE2L2Q16236 605 aa38.98■■■■□ 3.83
RAB40C-211ENST00000568586 FKBP8Q14318 412 aa38.97■■■■□ 3.83
RAB40C-211ENST00000568586 NARFQ9UHQ1 456 aa38.96■■■■□ 3.83
RAB40C-211ENST00000568586 COL15A1P39059 1388 aa38.95■■■■□ 3.83
RAB40C-211ENST00000568586 YBX3P16989 372 aaKnown RBP eCLIP38.95■■■■□ 3.83
RAB40C-211ENST00000568586 EIF5P55010 431 aaKnown RBP38.95■■■■□ 3.83
RAB40C-211ENST00000568586 TAF7Q15545 349 aaPredicted RBP38.94■■■■□ 3.82
RAB40C-211ENST00000568586 PRKRIP1Q9H875 184 aaPredicted RBP38.94■■■■□ 3.82
RAB40C-211ENST00000568586 KIF13BQ9NQT8 1826 aa38.93■■■■□ 3.82
RAB40C-211ENST00000568586 ZPR1O75312 459 aa38.93■■■■□ 3.82
RAB40C-211ENST00000568586 C10orf71Q711Q0 1435 aa38.93■■■■□ 3.82
RAB40C-211ENST00000568586 PARP3Q9Y6F1 533 aa38.93■■■■□ 3.82
RAB40C-211ENST00000568586 GRIN3BO60391 1043 aa38.92■■■■□ 3.82
RAB40C-211ENST00000568586 TM4SF1P30408 202 aa38.92■■■■□ 3.82
RAB40C-211ENST00000568586 DLG5Q8TDM6 1919 aa38.91■■■■□ 3.82
RAB40C-211ENST00000568586 CANXP27824 592 aaKnown RBP38.91■■■■□ 3.82
RAB40C-211ENST00000568586 USPL1Q5W0Q7 1092 aa38.91■■■■□ 3.82
RAB40C-211ENST00000568586 CHD4Q14839 1912 aa38.91■■■■□ 3.82
RAB40C-211ENST00000568586 MAPK8IP3Q9UPT6 1336 aa38.9■■■■□ 3.82
RAB40C-211ENST00000568586 PELP1Q8IZL8 1130 aaKnown RBP38.9■■■■□ 3.82
RAB40C-211ENST00000568586 TGFB2P61812 414 aa38.89■■■■□ 3.82
RAB40C-211ENST00000568586 DDR1Q08345 913 aa38.89■■■■□ 3.82
RAB40C-211ENST00000568586 BCL2L12Q9HB09 334 aa38.88■■■■□ 3.81
RAB40C-211ENST00000568586 A0A087WZG4 1122 aa38.87■■■■□ 3.81
RAB40C-211ENST00000568586 IL6STP40189 918 aaPredicted RBP38.87■■■■□ 3.81
RAB40C-211ENST00000568586 SNRPA1P09661 255 aaKnown RBP38.86■■■■□ 3.81
RAB40C-211ENST00000568586 PNISRQ8TF01 805 aaKnown RBP38.85■■■■□ 3.81
RAB40C-211ENST00000568586 USP16Q9Y5T5 823 aa38.85■■■■□ 3.81
RAB40C-211ENST00000568586 PXDNLA1KZ92 1463 aa38.85■■■■□ 3.81
RAB40C-211ENST00000568586 POLRMTO00411 1230 aaKnown RBP38.84■■■■□ 3.81
RAB40C-211ENST00000568586 A1BGP04217 495 aa38.84■■■■□ 3.81
RAB40C-211ENST00000568586 KIAA1551Q9HCM1 1747 aa38.83■■■■□ 3.81
RAB40C-211ENST00000568586 PRAMEF22A3QJZ6 481 aa38.8■■■■□ 3.8
RAB40C-211ENST00000568586 NFIXQ14938 502 aa38.8■■■■□ 3.8
RAB40C-211ENST00000568586 MIS18AQ9NYP9 233 aa38.8■■■■□ 3.8
RAB40C-211ENST00000568586 TMPOP42166 694 aaKnown RBP38.78■■■■□ 3.8
RAB40C-211ENST00000568586 THUMPD2Q9BTF0 503 aaKnown RBP38.78■■■■□ 3.8
RAB40C-211ENST00000568586 RIPK4P57078 832 aa38.77■■■■□ 3.8
RAB40C-211ENST00000568586 KDM3BQ7LBC6 1761 aa38.76■■■■□ 3.8
RAB40C-211ENST00000568586 A0A0G2JLW4 131 aa38.75■■■■□ 3.79
RAB40C-211ENST00000568586 WDR43Q15061 677 aaKnown RBP eCLIP38.74■■■■□ 3.79
RAB40C-211ENST00000568586 ADAMTS8Q9UP79 889 aa38.74■■■■□ 3.79
RAB40C-211ENST00000568586 DPEP1P16444 411 aa38.73■■■■□ 3.79
RAB40C-211ENST00000568586 KCNA3P22001 575 aa38.73■■■■□ 3.79
RAB40C-211ENST00000568586 EIF4A1P60842 406 aaKnown RBP38.73■■■■□ 3.79
RAB40C-211ENST00000568586 ZNF784Q8NCA9 323 aaPredicted RBP38.73■■■■□ 3.79
RAB40C-211ENST00000568586 RUNDC1Q96C34 613 aa38.73■■■■□ 3.79
RAB40C-211ENST00000568586 NRXN2Q9P2S2 1712 aa38.72■■■■□ 3.79
RAB40C-211ENST00000568586 TBC1D2BQ9UPU7 963 aa38.72■■■■□ 3.79
RAB40C-211ENST00000568586 GIGYF1O75420 1035 aaPredicted RBP38.71■■■■□ 3.79
RAB40C-211ENST00000568586 LMOD3Q0VAK6 560 aa38.71■■■■□ 3.79
RAB40C-211ENST00000568586 BABAM1Q9NWV8 329 aa38.71■■■■□ 3.79
RAB40C-211ENST00000568586 N4BP2Q86UW6 1770 aaPredicted RBP38.7■■■■□ 3.79
RAB40C-211ENST00000568586 NBPF26B4DH59 902 aa38.7■■■■□ 3.79
RAB40C-211ENST00000568586 CAMTA2O94983 1202 aa38.7■■■■□ 3.79
RAB40C-211ENST00000568586 NBPF10Q6P3W6 841 aaKnown RBP38.7■■■■□ 3.79
RAB40C-211ENST00000568586 NBPF15Q8N660 670 aa38.7■■■■□ 3.79
RAB40C-211ENST00000568586 SCN7AQ01118 1682 aa38.7■■■■□ 3.79
RAB40C-211ENST00000568586 ZNF316A6NFI3 1004 aaPredicted RBP38.68■■■■□ 3.78
RAB40C-211ENST00000568586 SERPINB2P05120 415 aa38.68■■■■□ 3.78
RAB40C-211ENST00000568586 NPM2Q86SE8 214 aaKnown RBP38.68■■■■□ 3.78
RAB40C-211ENST00000568586 CCDC146Q8IYE0 955 aa38.68■■■■□ 3.78
RAB40C-211ENST00000568586 ZNF330Q9Y3S2 320 aaPredicted RBP38.68■■■■□ 3.78
RAB40C-211ENST00000568586 AFDNP55196 1824 aaKnown RBP38.66■■■■□ 3.78
RAB40C-211ENST00000568586 RGL2O15211 777 aa38.66■■■■□ 3.78
RAB40C-211ENST00000568586 TBC1D9BQ66K14 1250 aa38.66■■■■□ 3.78
RAB40C-211ENST00000568586 DZIP3Q86Y13 1208 aaKnown RBP38.66■■■■□ 3.78
RAB40C-211ENST00000568586 WWC3Q9ULE0 1092 aa38.66■■■■□ 3.78
RAB40C-211ENST00000568586 BRCA1P38398 1863 aaKnown RBP38.65■■■■□ 3.78
RAB40C-211ENST00000568586 PIP4K2AP48426 406 aaPredicted RBP38.65■■■■□ 3.78
RAB40C-211ENST00000568586 LAMB4A4D0S4 1761 aa38.63■■■■□ 3.77
RAB40C-211ENST00000568586 CLEC4GQ6UXB4 293 aa38.63■■■■□ 3.77
RAB40C-211ENST00000568586 PIM2Q9P1W9 311 aa38.62■■■■□ 3.77
RAB40C-211ENST00000568586 TRIM35Q9UPQ4 493 aa38.62■■■■□ 3.77
RAB40C-211ENST00000568586 RRP7AQ9Y3A4 280 aaKnown RBP38.62■■■■□ 3.77
RAB40C-211ENST00000568586 TSPYL4Q9UJ04 414 aa38.61■■■■□ 3.77
RAB40C-211ENST00000568586 BCORQ6W2J9 1755 aa38.6■■■■□ 3.77
RAB40C-211ENST00000568586 BCS1LQ9Y276 419 aa38.6■■■■□ 3.77
RAB40C-211ENST00000568586 BICDL1Q6ZP65 573 aa38.59■■■■□ 3.77
RAB40C-211ENST00000568586 CARMIL3Q8ND23 1372 aa38.58■■■■□ 3.77
RAB40C-211ENST00000568586 CHRNA5P30532 468 aa38.57■■■■□ 3.76
RAB40C-211ENST00000568586 NEUROD2Q15784 382 aa38.56■■■■□ 3.76
RAB40C-211ENST00000568586 SETDB2Q96T68 719 aa38.56■■■■□ 3.76
RAB40C-211ENST00000568586 CHL1O00533 1208 aa38.55■■■■□ 3.76
RAB40C-211ENST00000568586 DALRD3Q5D0E6 543 aaKnown RBP38.55■■■■□ 3.76
RAB40C-211ENST00000568586 ADCY9O60503 1353 aa38.54■■■■□ 3.76
RAB40C-211ENST00000568586 ZNF652Q9Y2D9 606 aa38.53■■■■□ 3.76
RAB40C-211ENST00000568586 ERBB4Q15303 1308 aa38.53■■■■□ 3.76
RAB40C-211ENST00000568586 ARFGEF1Q9Y6D6 1849 aa38.52■■■■□ 3.76
RAB40C-211ENST00000568586 PRR5LQ6MZQ0 368 aa38.52■■■■□ 3.76
RAB40C-211ENST00000568586 BRIP1Q9BX63 1249 aa38.51■■■■□ 3.76
RAB40C-211ENST00000568586 PDZRN3Q9UPQ7 1066 aa38.5■■■■□ 3.75
RAB40C-211ENST00000568586 CCDC184Q52MB2 194 aa38.48■■■■□ 3.75
RAB40C-211ENST00000568586 ERVV-1B6SEH8 477 aa38.47■■■■□ 3.75
RAB40C-211ENST00000568586 DLEC1Q9Y238 1755 aa38.46■■■■□ 3.75
RAB40C-211ENST00000568586 H0YIN7 160 aa38.45■■■■□ 3.75
RAB40C-211ENST00000568586 APAF1O14727 1248 aa38.45■■■■□ 3.75
RAB40C-211ENST00000568586 PDE6BP35913 854 aa38.45■■■■□ 3.75
RAB40C-211ENST00000568586 ARHGAP27Q6ZUM4 889 aa38.45■■■■□ 3.75
RAB40C-211ENST00000568586 C2CD5Q86YS7 1000 aa38.45■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms