RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 UNC13BO14795 1591 aa8.56□□□□□ -1.04
CAPN3-218ENST00000568153 PTPRTO14522 1441 aa8.56□□□□□ -1.04
CAPN3-218ENST00000568153 DDX10Q13206 875 aaKnown RBP8.56□□□□□ -1.04
CAPN3-218ENST00000568153 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
CAPN3-218ENST00000568153 KLF16Q9BXK1 252 aaPredicted RBP8.56□□□□□ -1.04
CAPN3-218ENST00000568153 PCDHB9Q9Y5E1 797 aa8.56□□□□□ -1.04
CAPN3-218ENST00000568153 YEATS2Q9ULM3 1422 aa8.55□□□□□ -1.04
CAPN3-218ENST00000568153 NR3C2P08235 984 aa8.55□□□□□ -1.04
CAPN3-218ENST00000568153 NR5A1Q13285 461 aa8.55□□□□□ -1.04
CAPN3-218ENST00000568153 ZNF787Q6DD87 383 aa8.55□□□□□ -1.04
CAPN3-218ENST00000568153 CARD11Q9BXL7 1154 aa8.55□□□□□ -1.04
CAPN3-218ENST00000568153 KIDINS220Q9ULH0 1771 aa8.55□□□□□ -1.04
CAPN3-218ENST00000568153 IQGAP3Q86VI3 1631 aa8.54□□□□□ -1.04
CAPN3-218ENST00000568153 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
CAPN3-218ENST00000568153 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
CAPN3-218ENST00000568153 ESF1Q9H501 851 aaKnown RBP8.54□□□□□ -1.04
CAPN3-218ENST00000568153 ATP13A2Q9NQ11 1180 aa8.54□□□□□ -1.04
CAPN3-218ENST00000568153 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
CAPN3-218ENST00000568153 HECW2Q9P2P5 1572 aa8.53□□□□□ -1.04
CAPN3-218ENST00000568153 CAPN5O15484 640 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-218ENST00000568153 TIMP2P16035 220 aa8.53□□□□□ -1.04
CAPN3-218ENST00000568153 FSHRP23945 695 aa8.53□□□□□ -1.04
CAPN3-218ENST00000568153 VASH1Q7L8A9 365 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-218ENST00000568153 ADAMTS19Q8TE59 1207 aa8.53□□□□□ -1.04
CAPN3-218ENST00000568153 SLC52A1Q9NWF4 448 aa8.53□□□□□ -1.04
CAPN3-218ENST00000568153 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
CAPN3-218ENST00000568153 COL17A1Q9UMD9 1497 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-218ENST00000568153 EIF2AK4Q9P2K8 1649 aaKnown RBP8.52□□□□□ -1.05
CAPN3-218ENST00000568153 MLECQ14165 292 aa8.52□□□□□ -1.05
CAPN3-218ENST00000568153 ALG2Q9H553 416 aa8.52□□□□□ -1.05
CAPN3-218ENST00000568153 VWDEQ8N2E2 1590 aa8.52□□□□□ -1.05
CAPN3-218ENST00000568153 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-218ENST00000568153 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.05
CAPN3-218ENST00000568153 LMTK2Q8IWU2 1503 aa8.51□□□□□ -1.05
CAPN3-218ENST00000568153 WDR4P57081 412 aaKnown RBP8.51□□□□□ -1.05
CAPN3-218ENST00000568153 SOX11P35716 441 aa8.5□□□□□ -1.05
CAPN3-218ENST00000568153 SEMA3FQ13275 785 aa8.5□□□□□ -1.05
CAPN3-218ENST00000568153 IDI1Q13907 227 aa8.5□□□□□ -1.05
CAPN3-218ENST00000568153 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
CAPN3-218ENST00000568153 SPATA31E1Q6ZUB1 1445 aa8.5□□□□□ -1.05
CAPN3-218ENST00000568153 TRIM46Q7Z4K8 759 aa8.5□□□□□ -1.05
CAPN3-218ENST00000568153 KCTD15Q96SI1 283 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-218ENST00000568153 CDV3Q9UKY7 258 aaKnown RBP8.5□□□□□ -1.05
CAPN3-218ENST00000568153 ZMYM4Q5VZL5 1548 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 ROCK2O75116 1388 aaKnown RBP8.49□□□□□ -1.05
CAPN3-218ENST00000568153 FRMPD1Q5SYB0 1578 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 ARHGAP31Q2M1Z3 1444 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-218ENST00000568153 BMP1P13497 986 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 MCCD1P59942 119 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-218ENST00000568153 NBPF20Q3BBV1 942 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 HDGFL1Q5TGJ6 251 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 GLMNQ92990 594 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 ITPKCQ96DU7 683 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 ZFAND3Q9H8U3 227 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 DEPDC5O75140 1603 aa8.49□□□□□ -1.05
CAPN3-218ENST00000568153 PRDM15P57071 1507 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-218ENST00000568153 DIP2CQ9Y2E4 1556 aa8.48□□□□□ -1.05
CAPN3-218ENST00000568153 NPATQ14207 1427 aa8.48□□□□□ -1.05
CAPN3-218ENST00000568153 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
CAPN3-218ENST00000568153 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-218ENST00000568153 ZIC2O95409 532 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-218ENST00000568153 ZNF592Q92610 1267 aa8.48□□□□□ -1.05
CAPN3-218ENST00000568153 RICTORQ6R327 1708 aa8.48□□□□□ -1.05
CAPN3-218ENST00000568153 WASHC2AQ641Q2 1341 aa8.48□□□□□ -1.05
CAPN3-218ENST00000568153 ABCA6Q8N139 1617 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 PRAG1Q86YV5 1406 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 CNTLNQ9NXG0 1405 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 TET3O43151 1660 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 ESPNB1AK53 854 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 ANP32CO43423 234 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
CAPN3-218ENST00000568153 CCDC116Q8IYX3 515 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 MROH1Q8NDA8 1641 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 USP47Q96K76 1375 aa8.47□□□□□ -1.05
CAPN3-218ENST00000568153 RNF17Q9BXT8 1623 aaKnown RBP8.47□□□□□ -1.05
CAPN3-218ENST00000568153 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.05
CAPN3-218ENST00000568153 ABCC3O15438 1527 aa8.46□□□□□ -1.05
CAPN3-218ENST00000568153 TRPM2O94759 1503 aa8.46□□□□□ -1.05
CAPN3-218ENST00000568153 AGLP35573 1532 aa8.46□□□□□ -1.05
CAPN3-218ENST00000568153 SNRPBP14678 240 aaKnown RBP8.46□□□□□ -1.06
CAPN3-218ENST00000568153 NOS1P29475 1434 aa8.46□□□□□ -1.06
CAPN3-218ENST00000568153 RAB15P59190 212 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
CAPN3-218ENST00000568153 PHTF2Q8N3S3 785 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 CALR3Q96L12 384 aaKnown RBP8.45□□□□□ -1.06
CAPN3-218ENST00000568153 UCN2Q96RP3 112 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 SENP2Q9HC62 589 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 E9PCH4 1651 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 ADGRF5Q8IZF2 1346 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 ZMYM3Q14202 1370 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 CCDC7Q96M83 1385 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 RALGAPBQ86X10 1494 aa8.45□□□□□ -1.06
CAPN3-218ENST00000568153 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
CAPN3-218ENST00000568153 PIK3CDO00329 1044 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms