RNA–Protein interactions for RNA: ENST00000568023.1

CDH5-206, Transcript of cadherin 5, humanhuman

TSL 4

Gene CDH5, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-206ENST00000568023 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
CDH5-206ENST00000568023 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
CDH5-206ENST00000568023 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
CDH5-206ENST00000568023 PIGBQ92521 554 aa14.34□□□□□ -0.11
CDH5-206ENST00000568023 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
CDH5-206ENST00000568023 COL5A3P25940 1745 aaPredicted RBP14.34□□□□□ -0.11
CDH5-206ENST00000568023 TCERG1O14776 1098 aaKnown RBP14.33□□□□□ -0.12
CDH5-206ENST00000568023 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
CDH5-206ENST00000568023 FAM182BQ5T319 152 aa14.33□□□□□ -0.12
CDH5-206ENST00000568023 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
CDH5-206ENST00000568023 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
CDH5-206ENST00000568023 KCNQ3O43525 872 aa14.32□□□□□ -0.12
CDH5-206ENST00000568023 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
CDH5-206ENST00000568023 RLBP1P12271 317 aa14.32□□□□□ -0.12
CDH5-206ENST00000568023 ABCC4O15439 1325 aa14.32□□□□□ -0.12
CDH5-206ENST00000568023 RREB1Q92766 1687 aa14.32□□□□□ -0.12
CDH5-206ENST00000568023 KCNQ2O43526 872 aa14.31□□□□□ -0.12
CDH5-206ENST00000568023 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
CDH5-206ENST00000568023 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
CDH5-206ENST00000568023 PXDNLA1KZ92 1463 aa14.31□□□□□ -0.12
CDH5-206ENST00000568023 SLC39A6Q13433 755 aa14.3□□□□□ -0.12
CDH5-206ENST00000568023 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
CDH5-206ENST00000568023 TMEM57Q8N5G2 664 aa14.3□□□□□ -0.12
CDH5-206ENST00000568023 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
CDH5-206ENST00000568023 ASAP1Q9ULH1 1129 aa14.3□□□□□ -0.12
CDH5-206ENST00000568023 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
CDH5-206ENST00000568023 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
CDH5-206ENST00000568023 EIF2S2P20042 333 aaKnown RBP14.29□□□□□ -0.12
CDH5-206ENST00000568023 ZNF496Q96IT1 587 aaPredicted RBP14.29□□□□□ -0.12
CDH5-206ENST00000568023 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
CDH5-206ENST00000568023 EP400Q96L91 3159 aa14.29□□□□□ -0.12
CDH5-206ENST00000568023 FLIIQ13045 1269 aa14.28□□□□□ -0.12
CDH5-206ENST00000568023 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
CDH5-206ENST00000568023 MYH14Q7Z406 1995 aaKnown RBP14.28□□□□□ -0.12
CDH5-206ENST00000568023 NECTIN2Q92692 538 aa14.28□□□□□ -0.12
CDH5-206ENST00000568023 SYTL4Q96C24 671 aaPredicted RBP14.28□□□□□ -0.12
CDH5-206ENST00000568023 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
CDH5-206ENST00000568023 PALLDQ8WX93 1383 aa14.27□□□□□ -0.12
CDH5-206ENST00000568023 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.13
CDH5-206ENST00000568023 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.13
CDH5-206ENST00000568023 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
CDH5-206ENST00000568023 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
CDH5-206ENST00000568023 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
CDH5-206ENST00000568023 HYPKQ9NX55 129 aa14.26□□□□□ -0.13
CDH5-206ENST00000568023 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
CDH5-206ENST00000568023 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
CDH5-206ENST00000568023 SLC4A9Q96Q91 983 aa14.25□□□□□ -0.13
CDH5-206ENST00000568023 TRIM37O94972 964 aa14.24□□□□□ -0.13
CDH5-206ENST00000568023 DDX58O95786 925 aaKnown RBP14.24□□□□□ -0.13
CDH5-206ENST00000568023 G2E3Q7L622 706 aa14.24□□□□□ -0.13
CDH5-206ENST00000568023 RWDD1Q9H446 243 aaPredicted RBP14.24□□□□□ -0.13
CDH5-206ENST00000568023 ERBB4Q15303 1308 aa14.23□□□□□ -0.13
CDH5-206ENST00000568023 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
CDH5-206ENST00000568023 SLC4A10Q6U841 1118 aa14.23□□□□□ -0.13
CDH5-206ENST00000568023 DDX21Q9NR30 783 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDH5-206ENST00000568023 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 C4BP0C0L5 1744 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 LOC102724428A0A0B4J2F2 783 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
CDH5-206ENST00000568023 SIK1P57059 783 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 TEX13AQ9BXU3 409 aaPredicted RBP14.22□□□□□ -0.13
CDH5-206ENST00000568023 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
CDH5-206ENST00000568023 NUP188Q5SRE5 1749 aa14.21□□□□□ -0.13
CDH5-206ENST00000568023 AFDNP55196 1824 aaKnown RBP14.21□□□□□ -0.13
CDH5-206ENST00000568023 TUBGCP6Q96RT7 1819 aa14.21□□□□□ -0.13
CDH5-206ENST00000568023 ZBTB7BO15156 539 aaPredicted RBP14.21□□□□□ -0.13
CDH5-206ENST00000568023 ATP10DQ9P241 1426 aa14.21□□□□□ -0.13
CDH5-206ENST00000568023 PLSCR1O15162 318 aa14.2□□□□□ -0.14
CDH5-206ENST00000568023 PHAXQ9H814 394 aaKnown RBP14.2□□□□□ -0.14
CDH5-206ENST00000568023 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
CDH5-206ENST00000568023 QSER1Q2KHR3 1735 aa14.19□□□□□ -0.14
CDH5-206ENST00000568023 F6X3S4 739 aa14.19□□□□□ -0.14
CDH5-206ENST00000568023 ITPK1Q13572 414 aa14.19□□□□□ -0.14
CDH5-206ENST00000568023 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
CDH5-206ENST00000568023 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
CDH5-206ENST00000568023 PCDHB15Q9Y5E8 787 aa14.19□□□□□ -0.14
CDH5-206ENST00000568023 BCORQ6W2J9 1755 aa14.19□□□□□ -0.14
CDH5-206ENST00000568023 C4AP0C0L4 1744 aa14.18□□□□□ -0.14
CDH5-206ENST00000568023 GNAI3P08754 354 aa14.18□□□□□ -0.14
CDH5-206ENST00000568023 CYP19A1P11511 503 aaPredicted RBP14.18□□□□□ -0.14
CDH5-206ENST00000568023 HDAC1Q13547 482 aaPredicted RBP14.18□□□□□ -0.14
CDH5-206ENST00000568023 PDIA6Q15084 440 aa14.18□□□□□ -0.14
CDH5-206ENST00000568023 LRP10Q7Z4F1 713 aa14.18□□□□□ -0.14
CDH5-206ENST00000568023 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
CDH5-206ENST00000568023 ANXA1P04083 346 aa14.17□□□□□ -0.14
CDH5-206ENST00000568023 MYL6BP14649 208 aa14.17□□□□□ -0.14
CDH5-206ENST00000568023 KSR2Q6VAB6 950 aa14.17□□□□□ -0.14
CDH5-206ENST00000568023 SRCIN1Q9C0H9 1055 aa14.17□□□□□ -0.14
CDH5-206ENST00000568023 ADCY9O60503 1353 aa14.17□□□□□ -0.14
CDH5-206ENST00000568023 PI4KAP2A4QPH2 592 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 STARD3NLO95772 234 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 PROSER3Q2NL68 480 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 SLC27A3Q5K4L6 730 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 PROM2Q8N271 834 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 PI4KAP1Q8N8J0 262 aa14.16□□□□□ -0.14
CDH5-206ENST00000568023 HDAC5Q9UQL6 1122 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms