RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 DDX10Q13206 875 aaKnown RBP10.05□□□□□ -0.8
GINS3-207ENST00000567400 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
GINS3-207ENST00000567400 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
GINS3-207ENST00000567400 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
GINS3-207ENST00000567400 SCN7AQ01118 1682 aa10.05□□□□□ -0.8
GINS3-207ENST00000567400 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
GINS3-207ENST00000567400 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
GINS3-207ENST00000567400 USPL1Q5W0Q7 1092 aa10.04□□□□□ -0.8
GINS3-207ENST00000567400 TTC5Q8N0Z6 440 aa10.04□□□□□ -0.8
GINS3-207ENST00000567400 AFDNP55196 1824 aaKnown RBP10.03□□□□□ -0.8
GINS3-207ENST00000567400 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
GINS3-207ENST00000567400 POLRMTO00411 1230 aaKnown RBP10.03□□□□□ -0.8
GINS3-207ENST00000567400 TM4SF1P30408 202 aa10.03□□□□□ -0.8
GINS3-207ENST00000567400 EIF5P55010 431 aaKnown RBP10.03□□□□□ -0.8
GINS3-207ENST00000567400 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
GINS3-207ENST00000567400 ADCY9O60503 1353 aa10.02□□□□□ -0.8
GINS3-207ENST00000567400 BCORQ6W2J9 1755 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 A0A0G2JLW4 131 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 GRIN3BO60391 1043 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 KCNA3P22001 575 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
GINS3-207ENST00000567400 NFIXQ14938 502 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 RALBP1Q15311 655 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 FMNL2Q96PY5 1086 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 NARFQ9UHQ1 456 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
GINS3-207ENST00000567400 HTATSF1O43719 755 aaKnown RBP10.01□□□□□ -0.81
GINS3-207ENST00000567400 STARD3NLO95772 234 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 A1BGP04217 495 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 DPEP1P16444 411 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 TGFB2P61812 414 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 RTF1Q92541 710 aaKnown RBP10.01□□□□□ -0.81
GINS3-207ENST00000567400 THUMPD2Q9BTF0 503 aaKnown RBP10.01□□□□□ -0.81
GINS3-207ENST00000567400 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 MYBBP1AQ9BQG0 1328 aaKnown RBP10.01□□□□□ -0.81
GINS3-207ENST00000567400 LAMB4A4D0S4 1761 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 CARMIL3Q8ND23 1372 aa10.01□□□□□ -0.81
GINS3-207ENST00000567400 ZPR1O75312 459 aa10□□□□□ -0.81
GINS3-207ENST00000567400 PIP4K2AP48426 406 aaPredicted RBP10□□□□□ -0.81
GINS3-207ENST00000567400 NFE2L2Q16236 605 aa10□□□□□ -0.81
GINS3-207ENST00000567400 MIS18AQ9NYP9 233 aa10□□□□□ -0.81
GINS3-207ENST00000567400 ARFGEF1Q9Y6D6 1849 aa10□□□□□ -0.81
GINS3-207ENST00000567400 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
GINS3-207ENST00000567400 IL6STP40189 918 aaPredicted RBP9.99□□□□□ -0.81
GINS3-207ENST00000567400 TEX13AQ9BXU3 409 aaPredicted RBP9.99□□□□□ -0.81
GINS3-207ENST00000567400 ANKRD31Q8N7Z5 1873 aa9.99□□□□□ -0.81
GINS3-207ENST00000567400 NBPF26B4DH59 902 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 CAMTA2O94983 1202 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 SNRPA1P09661 255 aaKnown RBP9.98□□□□□ -0.81
GINS3-207ENST00000567400 CHRNA5P30532 468 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 TAF7Q15545 349 aaPredicted RBP9.98□□□□□ -0.81
GINS3-207ENST00000567400 TBC1D9BQ66K14 1250 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
GINS3-207ENST00000567400 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 ZNF330Q9Y3S2 320 aaPredicted RBP9.98□□□□□ -0.81
GINS3-207ENST00000567400 COL11A2P13942 1736 aaPredicted RBP9.98□□□□□ -0.81
GINS3-207ENST00000567400 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
GINS3-207ENST00000567400 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
GINS3-207ENST00000567400 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
GINS3-207ENST00000567400 A0A087WZG4 1122 aa9.96□□□□□ -0.82
GINS3-207ENST00000567400 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.82
GINS3-207ENST00000567400 SERPINB2P05120 415 aa9.96□□□□□ -0.82
GINS3-207ENST00000567400 BICDL1Q6ZP65 573 aa9.96□□□□□ -0.82
GINS3-207ENST00000567400 MAPK8IP3Q9UPT6 1336 aa9.96□□□□□ -0.82
GINS3-207ENST00000567400 NEFMP07197 916 aa9.95□□□□□ -0.82
GINS3-207ENST00000567400 TMPOP42166 694 aaKnown RBP9.95□□□□□ -0.82
GINS3-207ENST00000567400 EIF4A1P60842 406 aaKnown RBP9.95□□□□□ -0.82
GINS3-207ENST00000567400 DZIP3Q86Y13 1208 aaKnown RBP9.95□□□□□ -0.82
GINS3-207ENST00000567400 CCDC146Q8IYE0 955 aa9.95□□□□□ -0.82
GINS3-207ENST00000567400 CEP350Q5VT06 3117 aa9.95□□□□□ -0.82
GINS3-207ENST00000567400 RIPK4P57078 832 aa9.94□□□□□ -0.82
GINS3-207ENST00000567400 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
GINS3-207ENST00000567400 PNNQ9H307 717 aaKnown RBP9.94□□□□□ -0.82
GINS3-207ENST00000567400 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
GINS3-207ENST00000567400 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
GINS3-207ENST00000567400 RRP7AQ9Y3A4 280 aaKnown RBP9.94□□□□□ -0.82
GINS3-207ENST00000567400 DALRD3Q5D0E6 543 aaKnown RBP9.93□□□□□ -0.82
GINS3-207ENST00000567400 PRR5LQ6MZQ0 368 aa9.93□□□□□ -0.82
GINS3-207ENST00000567400 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
GINS3-207ENST00000567400 TRIM35Q9UPQ4 493 aa9.93□□□□□ -0.82
GINS3-207ENST00000567400 SBF1O95248 1867 aa9.92□□□□□ -0.82
GINS3-207ENST00000567400 C1QTNF8P60827 252 aa9.92□□□□□ -0.82
GINS3-207ENST00000567400 HLFQ16534 295 aa9.92□□□□□ -0.82
GINS3-207ENST00000567400 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
GINS3-207ENST00000567400 LRP10Q7Z4F1 713 aa9.92□□□□□ -0.82
GINS3-207ENST00000567400 TNRC6CQ9HCJ0 1690 aaKnown RBP9.91□□□□□ -0.82
GINS3-207ENST00000567400 PRELPP51888 382 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 CCDC184Q52MB2 194 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 CLEC4GQ6UXB4 293 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 C2CD5Q86YS7 1000 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 ZNF526Q8TF50 670 aaPredicted RBP9.91□□□□□ -0.82
GINS3-207ENST00000567400 RUNDC1Q96C34 613 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 SETDB2Q96T68 719 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 BRIP1Q9BX63 1249 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 TSPYL4Q9UJ04 414 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 NUP98P52948 1817 aa9.91□□□□□ -0.82
GINS3-207ENST00000567400 RGL2O15211 777 aa9.9□□□□□ -0.82
GINS3-207ENST00000567400 WDR43Q15061 677 aaKnown RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms