RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 NCOA4Q13772 614 aa7.55□□□□□ -1.2
CDH1-211ENST00000567320 UBAP2LQ14157 1087 aaKnown RBP7.55□□□□□ -1.2
CDH1-211ENST00000567320 ALG2Q9H553 416 aa7.55□□□□□ -1.2
CDH1-211ENST00000567320 GGA1Q9UJY5 639 aa7.55□□□□□ -1.2
CDH1-211ENST00000567320 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
CDH1-211ENST00000567320 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 SHISA8B8ZZ34 492 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 C2CD2LO14523 706 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 KHNYNO15037 678 aaKnown RBP7.54□□□□□ -1.2
CDH1-211ENST00000567320 IGHA1P01876 353 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 ATP4AP20648 1035 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 FLIIQ13045 1269 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 SUZ12Q15022 739 aaKnown RBP7.54□□□□□ -1.2
CDH1-211ENST00000567320 NLRP8Q86W28 1048 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH1-211ENST00000567320 MKL2Q9ULH7 1088 aa7.54□□□□□ -1.2
CDH1-211ENST00000567320 USP17L5A8MUK1 530 aa7.53□□□□□ -1.2
CDH1-211ENST00000567320 LZTS3O60299 673 aaPredicted RBP7.53□□□□□ -1.2
CDH1-211ENST00000567320 SNRPNP63162 240 aaKnown RBP7.53□□□□□ -1.2
CDH1-211ENST00000567320 C1orf229Q6ZS94 237 aaPredicted RBP7.53□□□□□ -1.2
CDH1-211ENST00000567320 DCAF5Q96JK2 942 aa7.53□□□□□ -1.2
CDH1-211ENST00000567320 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
CDH1-211ENST00000567320 ZNF232Q9UNY5 417 aa7.53□□□□□ -1.2
CDH1-211ENST00000567320 CD33P20138 364 aa7.52□□□□□ -1.21
CDH1-211ENST00000567320 NFATC2IPQ8NCF5 419 aa7.52□□□□□ -1.21
CDH1-211ENST00000567320 NEUROD4Q9HD90 331 aa7.52□□□□□ -1.21
CDH1-211ENST00000567320 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
CDH1-211ENST00000567320 ZNF358Q9NW07 568 aa7.52□□□□□ -1.21
CDH1-211ENST00000567320 USP3Q9Y6I4 520 aa7.52□□□□□ -1.21
CDH1-211ENST00000567320 POM121CA8CG34 1229 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 NEURL1BA8MQ27 555 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 MSTNO14793 375 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 MAPTP10636 758 aaKnown RBP7.51□□□□□ -1.21
CDH1-211ENST00000567320 MTFR1Q15390 333 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 PLA2G4EQ3MJ16 856 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 TBCELQ5QJ74 424 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 TRIM50Q86XT4 487 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 DNAAF2Q9NVR5 837 aaKnown RBP7.51□□□□□ -1.21
CDH1-211ENST00000567320 PRR12Q9ULL5 1215 aa7.51□□□□□ -1.21
CDH1-211ENST00000567320 IQSEC3Q9UPP2 1182 aaPredicted RBP7.51□□□□□ -1.21
CDH1-211ENST00000567320 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
CDH1-211ENST00000567320 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
CDH1-211ENST00000567320 ZDHHC3Q9NYG2 299 aa7.5□□□□□ -1.21
CDH1-211ENST00000567320 SCHIP1Q9P0W5 487 aaPredicted RBP7.5□□□□□ -1.21
CDH1-211ENST00000567320 ARAFP10398 606 aa7.49□□□□□ -1.21
CDH1-211ENST00000567320 TNP2Q05952 138 aa7.49□□□□□ -1.21
CDH1-211ENST00000567320 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
CDH1-211ENST00000567320 TPCN2Q8NHX9 752 aa7.49□□□□□ -1.21
CDH1-211ENST00000567320 L3MBTL2Q969R5 705 aa7.49□□□□□ -1.21
CDH1-211ENST00000567320 ZIC5Q96T25 663 aa7.49□□□□□ -1.21
CDH1-211ENST00000567320 RBM19Q9Y4C8 960 aaKnown RBP7.49□□□□□ -1.21
CDH1-211ENST00000567320 PIK3R2O00459 728 aa7.48□□□□□ -1.21
CDH1-211ENST00000567320 TXLNAP40222 546 aa7.48□□□□□ -1.21
CDH1-211ENST00000567320 ATP1A2P50993 1020 aa7.48□□□□□ -1.21
CDH1-211ENST00000567320 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
CDH1-211ENST00000567320 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
CDH1-211ENST00000567320 CHMP3Q9Y3E7 222 aa7.48□□□□□ -1.21
CDH1-211ENST00000567320 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 EPXP11678 715 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 ADH6P28332 368 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 NOS2P35228 1153 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 USP17L2Q6R6M4 530 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 LRRC69Q6ZNQ3 347 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 BTBD6Q96KE9 485 aa7.47□□□□□ -1.21
CDH1-211ENST00000567320 SERTM1A2A2V5 107 aa7.46□□□□□ -1.22
CDH1-211ENST00000567320 PCBP4P57723 403 aaKnown RBP7.46□□□□□ -1.22
CDH1-211ENST00000567320 CCDC102BQ68D86 513 aa7.46□□□□□ -1.22
CDH1-211ENST00000567320 ZNF295-AS1Q8N0V1 137 aa7.46□□□□□ -1.22
CDH1-211ENST00000567320 ZDHHC1Q8WTX9 485 aa7.46□□□□□ -1.22
CDH1-211ENST00000567320 SPOCK3Q9BQ16 436 aa7.46□□□□□ -1.22
CDH1-211ENST00000567320 MARK1Q9P0L2 795 aa7.46□□□□□ -1.22
CDH1-211ENST00000567320 ATP9BO43861 1147 aa7.45□□□□□ -1.22
CDH1-211ENST00000567320 FAM157BP0CG42 384 aa7.45□□□□□ -1.22
CDH1-211ENST00000567320 TEAD4Q15561 434 aa7.45□□□□□ -1.22
CDH1-211ENST00000567320 RHPN1Q8TCX5 695 aa7.45□□□□□ -1.22
CDH1-211ENST00000567320 ADAMTS19Q8TE59 1207 aa7.45□□□□□ -1.22
CDH1-211ENST00000567320 ZNF594Q96JF6 807 aaPredicted RBP7.45□□□□□ -1.22
CDH1-211ENST00000567320 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
CDH1-211ENST00000567320 GNB5O14775 395 aa7.44□□□□□ -1.22
CDH1-211ENST00000567320 FAM182BQ5T319 152 aa7.44□□□□□ -1.22
CDH1-211ENST00000567320 CHSY3Q70JA7 882 aa7.44□□□□□ -1.22
CDH1-211ENST00000567320 OGFOD1Q8N543 542 aa7.44□□□□□ -1.22
CDH1-211ENST00000567320 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
CDH1-211ENST00000567320 KRBA1A5PL33 1030 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 CLDN10P78369 228 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 PLEKHM2Q8IWE5 1019 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 CLUAP1Q96AJ1 413 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 STRN4Q9NRL3 753 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 HCN4Q9Y3Q4 1203 aa7.43□□□□□ -1.22
CDH1-211ENST00000567320 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
CDH1-211ENST00000567320 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
CDH1-211ENST00000567320 ALAS2P22557 587 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 COL8A1P27658 744 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 EPHA4P54764 986 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
CDH1-211ENST00000567320 ZNF468Q5VIY5 522 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms