RNA–Protein interactions for RNA: ENST00000567010.1

CDR2-205, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 2

Gene CDR2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-205ENST00000567010 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
CDR2-205ENST00000567010 IGSF1Q8N6C5 1336 aa6.78□□□□□ -1.32
CDR2-205ENST00000567010 BLMP54132 1417 aaPredicted RBP6.78□□□□□ -1.32
CDR2-205ENST00000567010 SMG6Q86US8 1419 aaKnown RBP6.78□□□□□ -1.32
CDR2-205ENST00000567010 IL2RBP14784 551 aa6.78□□□□□ -1.32
CDR2-205ENST00000567010 EN1Q05925 392 aaPredicted RBP6.78□□□□□ -1.32
CDR2-205ENST00000567010 NFE2L2Q16236 605 aa6.78□□□□□ -1.32
CDR2-205ENST00000567010 AMOTQ4VCS5 1084 aa6.78□□□□□ -1.32
CDR2-205ENST00000567010 TRPC5Q9UL62 973 aaPredicted RBP6.78□□□□□ -1.32
CDR2-205ENST00000567010 SPATA31A1Q5TZJ5 1347 aa6.77□□□□□ -1.32
CDR2-205ENST00000567010 SPATA31A5Q5VU36 1347 aa6.77□□□□□ -1.32
CDR2-205ENST00000567010 SPATA31A7Q8IWB4 1347 aa6.77□□□□□ -1.32
CDR2-205ENST00000567010 ANKRD26Q9UPS8 1709 aa6.77□□□□□ -1.33
CDR2-205ENST00000567010 MARF1Q9Y4F3 1742 aaKnown RBP6.77□□□□□ -1.33
CDR2-205ENST00000567010 FAM98CQ17RN3 349 aaKnown RBP6.77□□□□□ -1.33
CDR2-205ENST00000567010 ZNF772Q68DY9 489 aaPredicted RBP6.77□□□□□ -1.33
CDR2-205ENST00000567010 ZNF710Q8N1W2 664 aa6.77□□□□□ -1.33
CDR2-205ENST00000567010 RTF1Q92541 710 aaKnown RBP6.77□□□□□ -1.33
CDR2-205ENST00000567010 FBXW7Q969H0 707 aa6.77□□□□□ -1.33
CDR2-205ENST00000567010 THRAP3Q9Y2W1 955 aaKnown RBP6.77□□□□□ -1.33
CDR2-205ENST00000567010 CDK12Q9NYV4 1490 aaPredicted RBP6.77□□□□□ -1.33
CDR2-205ENST00000567010 PEAK1Q9H792 1746 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 A0A0G2JS52 829 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 RXRBP28702 533 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
CDR2-205ENST00000567010 FOSBP53539 338 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 MYT1Q01538 1121 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 PDE3BQ13370 1112 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 DCTN1Q14203 1278 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 C1orf141Q5JVX7 400 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 TYW1BQ6NUM6 668 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 ZNF530Q6P9A1 599 aaPredicted RBP6.76□□□□□ -1.33
CDR2-205ENST00000567010 MPRIPQ6WCQ1 1025 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 IFNL2Q8IZJ0 200 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 IL17REQ8NFR9 667 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 GAS2L2Q8NHY3 880 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 CDCA7Q9BWT1 371 aaPredicted RBP6.76□□□□□ -1.33
CDR2-205ENST00000567010 LGR6Q9HBX8 967 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 RGS17Q9UGC6 210 aaPredicted RBP6.76□□□□□ -1.33
CDR2-205ENST00000567010 LAS1LQ9Y4W2 734 aaKnown RBP6.76□□□□□ -1.33
CDR2-205ENST00000567010 PCDHGA10Q9Y5H3 936 aa6.76□□□□□ -1.33
CDR2-205ENST00000567010 COL3A1P02461 1466 aaPredicted RBP6.76□□□□□ -1.33
CDR2-205ENST00000567010 COL18A1P39060 1754 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 BCL9LQ86UU0 1499 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 PSDA5PKW4 1024 aaPredicted RBP6.75□□□□□ -1.33
CDR2-205ENST00000567010 HTATSF1O43719 755 aaKnown RBP6.75□□□□□ -1.33
CDR2-205ENST00000567010 ONECUT3O60422 494 aaPredicted RBP6.75□□□□□ -1.33
CDR2-205ENST00000567010 NUDT7P0C024 238 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 RBM6P78332 1123 aaKnown RBP6.75□□□□□ -1.33
CDR2-205ENST00000567010 HIC1Q14526 733 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 DDB1Q16531 1140 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 ARSIQ5FYB1 569 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 AKAP4Q5JQC9 854 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 MCM10Q7L590 875 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 NGEFQ8N5V2 710 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 LRP6O75581 1613 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 COL22A1Q8NFW1 1626 aaPredicted RBP6.75□□□□□ -1.33
CDR2-205ENST00000567010 CRB1P82279 1406 aa6.75□□□□□ -1.33
CDR2-205ENST00000567010 LTN1O94822 1766 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 SHPRHQ149N8 1683 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 USP54Q70EL1 1684 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 COL5A2P05997 1499 aaPredicted RBP6.74□□□□□ -1.33
CDR2-205ENST00000567010 KDRP35968 1356 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 CYP27B1O15528 508 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 HOXB1P14653 301 aaPredicted RBP6.74□□□□□ -1.33
CDR2-205ENST00000567010 PHKG2P15735 406 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 CCDC27Q2M243 656 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 POTEAQ6S8J7 498 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 SEPT12Q8IYM1 358 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 CDCA7LQ96GN5 454 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 THUMPD2Q9BTF0 503 aaKnown RBP6.74□□□□□ -1.33
CDR2-205ENST00000567010 MIS18AQ9NYP9 233 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 PHRF1Q9P1Y6 1649 aaKnown RBP6.74□□□□□ -1.33
CDR2-205ENST00000567010 SLIT2O94813 1529 aa6.74□□□□□ -1.33
CDR2-205ENST00000567010 COL14A1Q05707 1796 aaKnown RBP6.73□□□□□ -1.33
CDR2-205ENST00000567010 GNPATO15228 680 aa6.73□□□□□ -1.33
CDR2-205ENST00000567010 RNMTO43148 476 aaKnown RBP6.73□□□□□ -1.33
CDR2-205ENST00000567010 HSP90AB1P08238 724 aaKnown RBP6.73□□□□□ -1.33
CDR2-205ENST00000567010 LMOD3Q0VAK6 560 aa6.73□□□□□ -1.33
CDR2-205ENST00000567010 PTGDRQ13258 359 aa6.73□□□□□ -1.33
CDR2-205ENST00000567010 TAF7Q15545 349 aaPredicted RBP6.73□□□□□ -1.33
CDR2-205ENST00000567010 NFATC2IPQ8NCF5 419 aa6.73□□□□□ -1.33
CDR2-205ENST00000567010 KHSRPQ92945 711 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDR2-205ENST00000567010 SLC24A3Q9HC58 644 aa6.73□□□□□ -1.33
CDR2-205ENST00000567010 POTEB3A0JP26 581 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 CABP4P57796 275 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 CALD1Q05682 793 aaKnown RBP6.72□□□□□ -1.33
CDR2-205ENST00000567010 SLFN5Q08AF3 891 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 MAP2K5Q13163 448 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 FAM182BQ5T319 152 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 POTEBQ6S5H4 581 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 MARCH10Q8NA82 808 aaPredicted RBP6.72□□□□□ -1.33
CDR2-205ENST00000567010 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 DCAF5Q96JK2 942 aa6.72□□□□□ -1.33
CDR2-205ENST00000567010 CRYBG1Q9Y4K1 1723 aa6.71□□□□□ -1.34
CDR2-205ENST00000567010 BTBD11A6QL63 1104 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms