RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 MCM10Q7L590 875 aa13.45□□□□□ -0.26
HMGN2P40-201ENST00000566875 PIM2Q9P1W9 311 aa13.45□□□□□ -0.26
HMGN2P40-201ENST00000566875 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
HMGN2P40-201ENST00000566875 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
HMGN2P40-201ENST00000566875 KCNQ3O43525 872 aa13.44□□□□□ -0.26
HMGN2P40-201ENST00000566875 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
HMGN2P40-201ENST00000566875 IL6STP40189 918 aaPredicted RBP13.44□□□□□ -0.26
HMGN2P40-201ENST00000566875 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
HMGN2P40-201ENST00000566875 SCN11AQ9UI33 1791 aa13.44□□□□□ -0.26
HMGN2P40-201ENST00000566875 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 POLRMTO00411 1230 aaKnown RBP13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 A1BGP04217 495 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 KCNA3P22001 575 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 DDR1Q08345 913 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 NFIXQ14938 502 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 ARHGAP27Q6ZUM4 889 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 CHD4Q14839 1912 aa13.43□□□□□ -0.26
HMGN2P40-201ENST00000566875 SERPINB2P05120 415 aa13.42□□□□□ -0.26
HMGN2P40-201ENST00000566875 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
HMGN2P40-201ENST00000566875 DALRD3Q5D0E6 543 aaKnown RBP13.42□□□□□ -0.26
HMGN2P40-201ENST00000566875 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
HMGN2P40-201ENST00000566875 MRC1P22897 1456 aa13.42□□□□□ -0.26
HMGN2P40-201ENST00000566875 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
HMGN2P40-201ENST00000566875 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
HMGN2P40-201ENST00000566875 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
HMGN2P40-201ENST00000566875 COL15A1P39059 1388 aa13.41□□□□□ -0.26
HMGN2P40-201ENST00000566875 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
HMGN2P40-201ENST00000566875 C1QTNF8P60827 252 aa13.4□□□□□ -0.26
HMGN2P40-201ENST00000566875 NFE2L2Q16236 605 aa13.4□□□□□ -0.26
HMGN2P40-201ENST00000566875 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 PDZRN3Q9UPQ7 1066 aa13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 KCPQ6ZWJ8 1503 aa13.39□□□□□ -0.27
HMGN2P40-201ENST00000566875 H0YIN7 160 aa13.38□□□□□ -0.27
HMGN2P40-201ENST00000566875 CHRNA5P30532 468 aa13.38□□□□□ -0.27
HMGN2P40-201ENST00000566875 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
HMGN2P40-201ENST00000566875 COL5A3P25940 1745 aaPredicted RBP13.38□□□□□ -0.27
HMGN2P40-201ENST00000566875 C10orf71Q711Q0 1435 aa13.38□□□□□ -0.27
HMGN2P40-201ENST00000566875 PXDNLA1KZ92 1463 aa13.37□□□□□ -0.27
HMGN2P40-201ENST00000566875 RIPK4P57078 832 aa13.37□□□□□ -0.27
HMGN2P40-201ENST00000566875 TBC1D9BQ66K14 1250 aa13.37□□□□□ -0.27
HMGN2P40-201ENST00000566875 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
HMGN2P40-201ENST00000566875 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
HMGN2P40-201ENST00000566875 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
HMGN2P40-201ENST00000566875 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
HMGN2P40-201ENST00000566875 PDE6BP35913 854 aa13.36□□□□□ -0.27
HMGN2P40-201ENST00000566875 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
HMGN2P40-201ENST00000566875 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 RGL2O15211 777 aa13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 NPHP1O15259 732 aa13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 C2CD5Q86YS7 1000 aa13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 ZNF652Q9Y2D9 606 aa13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
HMGN2P40-201ENST00000566875 ZEB1P37275 1124 aaPredicted RBP13.34□□□□□ -0.27
HMGN2P40-201ENST00000566875 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
HMGN2P40-201ENST00000566875 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
HMGN2P40-201ENST00000566875 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
HMGN2P40-201ENST00000566875 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
HMGN2P40-201ENST00000566875 C4AP0C0L4 1744 aa13.33□□□□□ -0.27
HMGN2P40-201ENST00000566875 TJP1Q07157 1748 aa13.33□□□□□ -0.27
HMGN2P40-201ENST00000566875 ATP10DQ9P241 1426 aa13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 TMPOP42166 694 aaKnown RBP13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
HMGN2P40-201ENST00000566875 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
HMGN2P40-201ENST00000566875 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGN2P40-201ENST00000566875 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
HMGN2P40-201ENST00000566875 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
HMGN2P40-201ENST00000566875 ST5P78524 1137 aa13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
HMGN2P40-201ENST00000566875 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 CNKSR1Q969H4 720 aa13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 ADCY9O60503 1353 aa13.3□□□□□ -0.28
HMGN2P40-201ENST00000566875 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
HMGN2P40-201ENST00000566875 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
HMGN2P40-201ENST00000566875 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
HMGN2P40-201ENST00000566875 CCDC24Q8N4L8 307 aa13.29□□□□□ -0.28
HMGN2P40-201ENST00000566875 RNF181Q9P0P0 153 aa13.29□□□□□ -0.28
HMGN2P40-201ENST00000566875 UBR2Q8IWV8 1755 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms