RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 CHMLP26374 656 aa11.35□□□□□ -0.59
BBS4-210ENST00000566400 ERC1Q8IUD2 1116 aa11.35□□□□□ -0.59
BBS4-210ENST00000566400 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
BBS4-210ENST00000566400 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 CNTROBQ8N137 903 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 TUBGCP6Q96RT7 1819 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 TTC41PQ6P2S7 1318 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 SURF6O75683 361 aaKnown RBP11.34□□□□□ -0.59
BBS4-210ENST00000566400 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
BBS4-210ENST00000566400 GCP02774 474 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 SSFA2P28290 1259 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 MTX1Q13505 466 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 RILPL2Q969X0 211 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
BBS4-210ENST00000566400 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
BBS4-210ENST00000566400 RNMTO43148 476 aaKnown RBP11.33□□□□□ -0.6
BBS4-210ENST00000566400 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
BBS4-210ENST00000566400 USHBP1Q8N6Y0 703 aa11.33□□□□□ -0.6
BBS4-210ENST00000566400 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
BBS4-210ENST00000566400 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
BBS4-210ENST00000566400 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
BBS4-210ENST00000566400 HYPKQ9NX55 129 aa11.33□□□□□ -0.6
BBS4-210ENST00000566400 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
BBS4-210ENST00000566400 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
BBS4-210ENST00000566400 NEK4P51957 841 aa11.32□□□□□ -0.6
BBS4-210ENST00000566400 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
BBS4-210ENST00000566400 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
BBS4-210ENST00000566400 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
BBS4-210ENST00000566400 USP42Q9H9J4 1324 aaKnown RBP11.32□□□□□ -0.6
BBS4-210ENST00000566400 ABCC6O95255 1503 aa11.32□□□□□ -0.6
BBS4-210ENST00000566400 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
BBS4-210ENST00000566400 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
BBS4-210ENST00000566400 CUL4AQ13619 759 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 ANKRD24Q8TF21 1146 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
BBS4-210ENST00000566400 HEG1Q9ULI3 1381 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
BBS4-210ENST00000566400 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
BBS4-210ENST00000566400 MBD3O95983 291 aa11.3□□□□□ -0.6
BBS4-210ENST00000566400 HSPA4P34932 840 aa11.3□□□□□ -0.6
BBS4-210ENST00000566400 ZNF445P59923 1031 aa11.3□□□□□ -0.6
BBS4-210ENST00000566400 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
BBS4-210ENST00000566400 TRIM44Q96DX7 344 aaPredicted RBP11.3□□□□□ -0.6
BBS4-210ENST00000566400 TMX3Q96JJ7 454 aa11.3□□□□□ -0.6
BBS4-210ENST00000566400 C9orf78Q9NZ63 289 aaPredicted RBP11.3□□□□□ -0.6
BBS4-210ENST00000566400 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
BBS4-210ENST00000566400 HIP1O00291 1037 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
BBS4-210ENST00000566400 PDIA4P13667 645 aaKnown RBP11.29□□□□□ -0.6
BBS4-210ENST00000566400 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
BBS4-210ENST00000566400 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.65e-6■■■□□ 17.1
BBS4-210ENST00000566400 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
BBS4-210ENST00000566400 HSPA1LP34931 641 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 CCDC173Q0VFZ6 552 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 PIAS4Q8N2W9 510 aaPredicted RBP11.29□□□□□ -0.6
BBS4-210ENST00000566400 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 ADCY9O60503 1353 aa11.29□□□□□ -0.6
BBS4-210ENST00000566400 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 DCCP43146 1447 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 MPRIPQ6WCQ1 1025 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 PI4K2BQ8TCG2 481 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 RAD50Q92878 1312 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
BBS4-210ENST00000566400 UTYO14607 1347 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 SGSM2O43147 1006 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
BBS4-210ENST00000566400 RAPGEF4Q8WZA2 1011 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
BBS4-210ENST00000566400 IL1RAPL2Q9NP60 686 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 LMBRD1Q9NUN5 540 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
BBS4-210ENST00000566400 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
BBS4-210ENST00000566400 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
BBS4-210ENST00000566400 MAP3K2Q9Y2U5 619 aa11.27□□□□□ -0.61
BBS4-210ENST00000566400 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.61
BBS4-210ENST00000566400 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 CRYBG1Q9Y4K1 1723 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 TOM1O60784 492 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 NCLP19338 710 aaKnown RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 PROSER2Q86WR7 435 aaPredicted RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 ERBB3P21860 1342 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 BRD1O95696 1058 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
BBS4-210ENST00000566400 CLCN1P35523 988 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 ZGPATQ8N5A5 531 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms