RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CDK2AP1O14519 115 aa8.23□□□□□ -1.09
CNOT1-209ENST00000566240 AVPP01185 164 aa8.23□□□□□ -1.09
CNOT1-209ENST00000566240 IL2RAP01589 272 aa8.23□□□□□ -1.09
CNOT1-209ENST00000566240 MPSTP25325 297 aa8.23□□□□□ -1.09
CNOT1-209ENST00000566240 PSMA6P60900 246 aaKnown RBP8.23□□□□□ -1.09
CNOT1-209ENST00000566240 FBXO33Q7Z6M2 555 aa8.23□□□□□ -1.09
CNOT1-209ENST00000566240 COL19A1Q14993 1142 aa8.22□□□□□ -1.09
CNOT1-209ENST00000566240 RGL4Q8IZJ4 473 aa8.22□□□□□ -1.09
CNOT1-209ENST00000566240 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
CNOT1-209ENST00000566240 CNKSR1Q969H4 720 aa8.22□□□□□ -1.09
CNOT1-209ENST00000566240 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
CNOT1-209ENST00000566240 IGSF5Q9NSI5 407 aa8.22□□□□□ -1.09
CNOT1-209ENST00000566240 ALDH1A1P00352 501 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 ADH1AP07327 375 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 TLR1Q15399 786 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 COX20Q5RI15 118 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 RBCK1Q9BYM8 510 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 STIM2Q9P246 746 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 GMPR2Q9P2T1 348 aaKnown RBP8.21□□□□□ -1.1
CNOT1-209ENST00000566240 CHMP3Q9Y3E7 222 aa8.21□□□□□ -1.1
CNOT1-209ENST00000566240 NDUFB5O43674 189 aa8.2□□□□□ -1.1
CNOT1-209ENST00000566240 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
CNOT1-209ENST00000566240 NNTQ13423 1086 aa8.2□□□□□ -1.1
CNOT1-209ENST00000566240 KDF1Q8NAX2 398 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-209ENST00000566240 BRPF3Q9ULD4 1205 aa8.2□□□□□ -1.1
CNOT1-209ENST00000566240 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-209ENST00000566240 HRH3Q9Y5N1 445 aa8.2□□□□□ -1.1
CNOT1-209ENST00000566240 USP3Q9Y6I4 520 aa8.2□□□□□ -1.1
CNOT1-209ENST00000566240 TNFRSF10BO14763 440 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 AXIN1O15169 862 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 EIF1AXP47813 144 aaKnown RBP8.19□□□□□ -1.1
CNOT1-209ENST00000566240 CBLBQ13191 982 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 CLN3Q13286 438 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 AAMPQ13685 434 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 EAPPQ56P03 285 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-209ENST00000566240 ALKBH2Q6NS38 261 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 TMC7Q7Z402 723 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
CNOT1-209ENST00000566240 WASF2Q9Y6W5 498 aa8.19□□□□□ -1.1
CNOT1-209ENST00000566240 SERTM1A2A2V5 107 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 CENPCQ03188 943 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 POTEAQ6S8J7 498 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 MYO19Q96H55 970 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 CITED4Q96RK1 184 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 LRFN2Q9ULH4 789 aa8.18□□□□□ -1.1
CNOT1-209ENST00000566240 PTGIRP43119 386 aa8.17□□□□□ -1.1
CNOT1-209ENST00000566240 SMCPP49901 116 aaPredicted RBP8.17□□□□□ -1.1
CNOT1-209ENST00000566240 TEAD4Q15561 434 aa8.17□□□□□ -1.1
CNOT1-209ENST00000566240 Q6ZVU0 165 aa8.17□□□□□ -1.1
CNOT1-209ENST00000566240 CCDC87Q9NVE4 849 aa8.17□□□□□ -1.1
CNOT1-209ENST00000566240 C11orf95C9JLR9 678 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-209ENST00000566240 EML1O00423 815 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 FZD6O60353 706 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 VAMP1P23763 118 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 BRD2P25440 801 aaKnown RBP8.16□□□□□ -1.1
CNOT1-209ENST00000566240 NOS2P35228 1153 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-209ENST00000566240 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
CNOT1-209ENST00000566240 TMC1Q8TDI8 760 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 NGLY1Q96IV0 654 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 FHDC1Q9C0D6 1143 aaPredicted RBP8.16□□□□□ -1.1
CNOT1-209ENST00000566240 CABP1Q9NZU7 370 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
CNOT1-209ENST00000566240 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-209ENST00000566240 MEN1O00255 615 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 ZBTB39O15060 712 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 P4HBP07237 508 aaKnown RBP8.15□□□□□ -1.1
CNOT1-209ENST00000566240 SH3PXD2AQ5TCZ1 1133 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 ZDHHC1Q8WTX9 485 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 L3MBTL2Q969R5 705 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 AGBL1Q96MI9 1066 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 KLF16Q9BXK1 252 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-209ENST00000566240 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 HCN4Q9Y3Q4 1203 aa8.15□□□□□ -1.1
CNOT1-209ENST00000566240 TREHO43280 583 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 IGSF3O75054 1194 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 WFS1O76024 890 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 ZIC2O95409 532 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-209ENST00000566240 SMPD1P17405 629 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 PLCB3Q01970 1234 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 PPARGC1BQ86YN6 1023 aaKnown RBP8.14□□□□□ -1.11
CNOT1-209ENST00000566240 ALDH16A1Q8IZ83 802 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 ZNF295-AS1Q8N0V1 137 aa8.14□□□□□ -1.11
CNOT1-209ENST00000566240 TCF3P15923 654 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
CNOT1-209ENST00000566240 RELBQ01201 579 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 RTN1Q16799 776 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 DMRTB1Q96MA1 342 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 ZSCAN10Q96SZ4 725 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-209ENST00000566240 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
CNOT1-209ENST00000566240 FMR1Q06787 632 aaKnown RBP eCLIP8.12□□□□□ -1.116e-7■■□□□ 13.9
CNOT1-209ENST00000566240 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms