RNA–Protein interactions for RNA: ENST00000566234.2

CDIP1-208, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-208ENST00000566234 NEFMP07197 916 aa17.59■□□□□ 0.41
CDIP1-208ENST00000566234 TM4SF1P30408 202 aa17.59■□□□□ 0.41
CDIP1-208ENST00000566234 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
CDIP1-208ENST00000566234 C10orf71Q711Q0 1435 aa17.58■□□□□ 0.41
CDIP1-208ENST00000566234 COL15A1P39059 1388 aa17.58■□□□□ 0.4
CDIP1-208ENST00000566234 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
CDIP1-208ENST00000566234 KCNQ3O43525 872 aa17.58■□□□□ 0.4
CDIP1-208ENST00000566234 DDR1Q08345 913 aa17.58■□□□□ 0.4
CDIP1-208ENST00000566234 A0A087WZG4 1122 aa17.57■□□□□ 0.4
CDIP1-208ENST00000566234 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
CDIP1-208ENST00000566234 DCTN1Q14203 1278 aa17.57■□□□□ 0.4
CDIP1-208ENST00000566234 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
CDIP1-208ENST00000566234 POLRMTO00411 1230 aaKnown RBP17.56■□□□□ 0.4
CDIP1-208ENST00000566234 DPEP1P16444 411 aa17.56■□□□□ 0.4
CDIP1-208ENST00000566234 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
CDIP1-208ENST00000566234 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
CDIP1-208ENST00000566234 A1BGP04217 495 aa17.55■□□□□ 0.4
CDIP1-208ENST00000566234 BCL2L12Q9HB09 334 aa17.55■□□□□ 0.4
CDIP1-208ENST00000566234 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
CDIP1-208ENST00000566234 NFIXQ14938 502 aa17.54■□□□□ 0.4
CDIP1-208ENST00000566234 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
CDIP1-208ENST00000566234 C4AP0C0L4 1744 aa17.53■□□□□ 0.4
CDIP1-208ENST00000566234 KCNA3P22001 575 aa17.53■□□□□ 0.4
CDIP1-208ENST00000566234 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
CDIP1-208ENST00000566234 BCS1LQ9Y276 419 aa17.53■□□□□ 0.4
CDIP1-208ENST00000566234 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
CDIP1-208ENST00000566234 UBR2Q8IWV8 1755 aa17.53■□□□□ 0.4
CDIP1-208ENST00000566234 SNRPA1P09661 255 aaKnown RBP17.52■□□□□ 0.4
CDIP1-208ENST00000566234 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
CDIP1-208ENST00000566234 ZNF330Q9Y3S2 320 aaPredicted RBP17.52■□□□□ 0.4
CDIP1-208ENST00000566234 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
CDIP1-208ENST00000566234 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
CDIP1-208ENST00000566234 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
CDIP1-208ENST00000566234 PIM2Q9P1W9 311 aa17.51■□□□□ 0.39
CDIP1-208ENST00000566234 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
CDIP1-208ENST00000566234 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
CDIP1-208ENST00000566234 SERPINB2P05120 415 aa17.5■□□□□ 0.39
CDIP1-208ENST00000566234 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
CDIP1-208ENST00000566234 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
CDIP1-208ENST00000566234 CHRNA5P30532 468 aa17.49■□□□□ 0.39
CDIP1-208ENST00000566234 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
CDIP1-208ENST00000566234 DALRD3Q5D0E6 543 aaKnown RBP17.48■□□□□ 0.39
CDIP1-208ENST00000566234 CHD4Q14839 1912 aa17.48■□□□□ 0.39
CDIP1-208ENST00000566234 VIRMAQ69YN4 1812 aaKnown RBP17.47■□□□□ 0.39
CDIP1-208ENST00000566234 PIP4K2AP48426 406 aaPredicted RBP17.47■□□□□ 0.39
CDIP1-208ENST00000566234 TBC1D9BQ66K14 1250 aa17.47■□□□□ 0.39
CDIP1-208ENST00000566234 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
CDIP1-208ENST00000566234 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
CDIP1-208ENST00000566234 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
CDIP1-208ENST00000566234 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
CDIP1-208ENST00000566234 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
CDIP1-208ENST00000566234 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
CDIP1-208ENST00000566234 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
CDIP1-208ENST00000566234 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
CDIP1-208ENST00000566234 RIPK4P57078 832 aa17.45■□□□□ 0.38
CDIP1-208ENST00000566234 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
CDIP1-208ENST00000566234 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
CDIP1-208ENST00000566234 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
CDIP1-208ENST00000566234 ADCY9O60503 1353 aa17.44■□□□□ 0.38
CDIP1-208ENST00000566234 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
CDIP1-208ENST00000566234 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
CDIP1-208ENST00000566234 C1QTNF8P60827 252 aa17.43■□□□□ 0.38
CDIP1-208ENST00000566234 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
CDIP1-208ENST00000566234 GPBP1L1Q9HC44 474 aaPredicted RBP17.43■□□□□ 0.38
CDIP1-208ENST00000566234 CARMIL3Q8ND23 1372 aa17.42■□□□□ 0.38
CDIP1-208ENST00000566234 H0YIN7 160 aa17.42■□□□□ 0.38
CDIP1-208ENST00000566234 ZEB1P37275 1124 aaPredicted RBP17.42■□□□□ 0.38
CDIP1-208ENST00000566234 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
CDIP1-208ENST00000566234 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDIP1-208ENST00000566234 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
CDIP1-208ENST00000566234 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
CDIP1-208ENST00000566234 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
CDIP1-208ENST00000566234 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
CDIP1-208ENST00000566234 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
CDIP1-208ENST00000566234 ZNF526Q8TF50 670 aaPredicted RBP17.41■□□□□ 0.38
CDIP1-208ENST00000566234 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
CDIP1-208ENST00000566234 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
CDIP1-208ENST00000566234 RGL2O15211 777 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 PDE6BP35913 854 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 RUNDC1Q96C34 613 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 PDZRN3Q9UPQ7 1066 aa17.4■□□□□ 0.38
CDIP1-208ENST00000566234 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
CDIP1-208ENST00000566234 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
CDIP1-208ENST00000566234 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.37
CDIP1-208ENST00000566234 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
CDIP1-208ENST00000566234 NPHP1O15259 732 aa17.38■□□□□ 0.37
CDIP1-208ENST00000566234 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
CDIP1-208ENST00000566234 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
CDIP1-208ENST00000566234 NRXN2Q9P2S2 1712 aa17.38■□□□□ 0.37
CDIP1-208ENST00000566234 ST5P78524 1137 aa17.37■□□□□ 0.37
CDIP1-208ENST00000566234 NBPF5PQ86XG9 351 aaPredicted RBP17.37■□□□□ 0.37
CDIP1-208ENST00000566234 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
CDIP1-208ENST00000566234 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDIP1-208ENST00000566234 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDIP1-208ENST00000566234 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
CDIP1-208ENST00000566234 MYL6BP14649 208 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms