RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 KCNQ4P56696 695 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 EZH2Q15910 746 aaKnown RBP9.95□□□□□ -0.82
CDH1-208ENST00000565810 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
CDH1-208ENST00000565810 LINC00116Q8NCU8 138 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDH1-208ENST00000565810 AK7Q96M32 723 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 CAMKK2Q96RR4 588 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 BCL2L13Q9BXK5 485 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 CCDC87Q9NVE4 849 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 CHPF2Q9P2E5 772 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 KCPQ6ZWJ8 1503 aa9.95□□□□□ -0.82
CDH1-208ENST00000565810 CNTNAP4Q9C0A0 1308 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 BCAR3O75815 825 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 DDX58O95786 925 aaKnown RBP9.94□□□□□ -0.82
CDH1-208ENST00000565810 MYL6BP14649 208 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 IL6STP40189 918 aaPredicted RBP9.94□□□□□ -0.82
CDH1-208ENST00000565810 CRKLP46109 303 aaKnown RBP9.94□□□□□ -0.82
CDH1-208ENST00000565810 BRPF1P55201 1214 aaPredicted RBP9.94□□□□□ -0.82
CDH1-208ENST00000565810 ILDR2Q71H61 639 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 DEFB132Q7Z7B7 95 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 PROM2Q8N271 834 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 MRPL50Q8N5N7 158 aaKnown RBP9.94□□□□□ -0.82
CDH1-208ENST00000565810 ARXQ96QS3 562 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 LRRC4BQ9NT99 713 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 ZBTB1Q9Y2K1 713 aa9.94□□□□□ -0.82
CDH1-208ENST00000565810 ZNF330Q9Y3S2 320 aaPredicted RBP9.94□□□□□ -0.82
CDH1-208ENST00000565810 KIF16BQ96L93 1317 aa9.93□□□□□ -0.82
CDH1-208ENST00000565810 A0A087WZG4 1122 aa9.93□□□□□ -0.82
CDH1-208ENST00000565810 ANXA1P04083 346 aa9.93□□□□□ -0.82
CDH1-208ENST00000565810 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
CDH1-208ENST00000565810 INTS5Q6P9B9 1019 aaKnown RBP9.93□□□□□ -0.82
CDH1-208ENST00000565810 FRAT1Q92837 279 aaPredicted RBP9.93□□□□□ -0.82
CDH1-208ENST00000565810 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
CDH1-208ENST00000565810 PTPRCP08575 1304 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 GNPATO15228 680 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 RPS6KA4O75676 772 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 MS4A1P11836 297 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 PIP4K2AP48426 406 aaPredicted RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 AIMP1Q12904 312 aaKnown RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 FLIIQ13045 1269 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 FKBP5Q13451 457 aaPredicted RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 PDIA6Q15084 440 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 PROSER3Q2NL68 480 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 ZKSCAN2Q63HK3 967 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 KIF6Q6ZMV9 814 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 COPS6Q7L5N1 327 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 XAGE3Q8WTP9 111 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 API5Q9BZZ5 524 aaKnown RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 STK32BQ9NY57 414 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 NOB1Q9ULX3 412 aaKnown RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 SIPA1L3O60292 1781 aaPredicted RBP9.92□□□□□ -0.82
CDH1-208ENST00000565810 KDM3BQ7LBC6 1761 aa9.92□□□□□ -0.82
CDH1-208ENST00000565810 ITGB4P16144 1822 aa9.91□□□□□ -0.82
CDH1-208ENST00000565810 EIF5P55010 431 aaKnown RBP9.91□□□□□ -0.82
CDH1-208ENST00000565810 RIC3Q7Z5B4 369 aa9.91□□□□□ -0.82
CDH1-208ENST00000565810 ARHGAP45Q92619 1136 aa9.91□□□□□ -0.82
CDH1-208ENST00000565810 PHAXQ9H814 394 aaKnown RBP9.91□□□□□ -0.82
CDH1-208ENST00000565810 TFCP2L1Q9NZI6 479 aa9.91□□□□□ -0.82
CDH1-208ENST00000565810 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
CDH1-208ENST00000565810 PAPPAQ13219 1627 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 ADRA2BP18089 450 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 RRP1P56182 461 aaKnown RBP9.9□□□□□ -0.82
CDH1-208ENST00000565810 ATF7IPQ6VMQ6 1270 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 G2E3Q7L622 706 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 FTSJ3Q8IY81 847 aaKnown RBP9.9□□□□□ -0.82
CDH1-208ENST00000565810 FLAD1Q8NFF5 587 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 BTAF1O14981 1849 aa9.9□□□□□ -0.82
CDH1-208ENST00000565810 ZPR1O75312 459 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 PHF14O94880 888 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 SSFA2P28290 1259 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 RFC4P35249 363 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 KSR2Q6VAB6 950 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 LRP10Q7Z4F1 713 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
CDH1-208ENST00000565810 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
CDH1-208ENST00000565810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
CDH1-208ENST00000565810 PI4KAP2A4QPH2 592 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 ERVV-1B6SEH8 477 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 PLIN1O60240 522 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 NEXNQ0ZGT2 675 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 SLC15A2Q16348 729 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 HSP90AB3PQ58FF7 597 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 SLC4A10Q6U841 1118 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 TTLL7Q6ZT98 887 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 DZIP1LQ8IYY4 767 aaKnown RBP9.88□□□□□ -0.83
CDH1-208ENST00000565810 PI4KAP1Q8N8J0 262 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 DNAAF4Q8WXU2 420 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 ZNF652Q9Y2D9 606 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 COL15A1P39059 1388 aa9.88□□□□□ -0.83
CDH1-208ENST00000565810 MAP3K15Q6ZN16 1313 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 TRIM27P14373 513 aa9.87□□□□□ -0.83
CDH1-208ENST00000565810 PDE3AQ14432 1141 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 429.2 ms