RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 ITPK1Q13572 414 aa13.17□□□□□ -0.3
CNOT1-208ENST00000565697 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
CNOT1-208ENST00000565697 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
CNOT1-208ENST00000565697 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
CNOT1-208ENST00000565697 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
CNOT1-208ENST00000565697 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
CNOT1-208ENST00000565697 ADAMTS7Q9UKP4 1686 aa13.16□□□□□ -0.3
CNOT1-208ENST00000565697 GNPATO15228 680 aa13.16□□□□□ -0.3
CNOT1-208ENST00000565697 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
CNOT1-208ENST00000565697 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
CNOT1-208ENST00000565697 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
CNOT1-208ENST00000565697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
CNOT1-208ENST00000565697 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
CNOT1-208ENST00000565697 PHF14O94880 888 aa13.15□□□□□ -0.3
CNOT1-208ENST00000565697 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
CNOT1-208ENST00000565697 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
CNOT1-208ENST00000565697 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
CNOT1-208ENST00000565697 IL17REQ8NFR9 667 aa13.15□□□□□ -0.3
CNOT1-208ENST00000565697 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-208ENST00000565697 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
CNOT1-208ENST00000565697 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
CNOT1-208ENST00000565697 COL24A1Q17RW2 1714 aa13.14□□□□□ -0.31
CNOT1-208ENST00000565697 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-208ENST00000565697 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
CNOT1-208ENST00000565697 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
CNOT1-208ENST00000565697 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
CNOT1-208ENST00000565697 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
CNOT1-208ENST00000565697 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-208ENST00000565697 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
CNOT1-208ENST00000565697 SRCAPQ6ZRS2 3230 aa13.12□□□□□ -0.31
CNOT1-208ENST00000565697 CEMIPQ8WUJ3 1361 aa13.12□□□□□ -0.31
CNOT1-208ENST00000565697 COL5A3P25940 1745 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-208ENST00000565697 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-208ENST00000565697 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-208ENST00000565697 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
CNOT1-208ENST00000565697 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
CNOT1-208ENST00000565697 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
CNOT1-208ENST00000565697 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
CNOT1-208ENST00000565697 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-208ENST00000565697 PRKRIP1Q9H875 184 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-208ENST00000565697 RFC4P35249 363 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 MSL1Q68DK7 614 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
CNOT1-208ENST00000565697 STARD3NLO95772 234 aa13.09□□□□□ -0.31
CNOT1-208ENST00000565697 TJP1Q07157 1748 aa13.09□□□□□ -0.31
CNOT1-208ENST00000565697 WDR43Q15061 677 aaKnown RBP eCLIP13.09□□□□□ -0.31
CNOT1-208ENST00000565697 LCE2DQ5TA82 110 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-208ENST00000565697 MCM10Q7L590 875 aa13.09□□□□□ -0.31
CNOT1-208ENST00000565697 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
CNOT1-208ENST00000565697 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
CNOT1-208ENST00000565697 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
CNOT1-208ENST00000565697 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
CNOT1-208ENST00000565697 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.31
CNOT1-208ENST00000565697 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-208ENST00000565697 NFE2L2Q16236 605 aa13.08□□□□□ -0.32
CNOT1-208ENST00000565697 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
CNOT1-208ENST00000565697 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
CNOT1-208ENST00000565697 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
CNOT1-208ENST00000565697 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
CNOT1-208ENST00000565697 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
CNOT1-208ENST00000565697 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-208ENST00000565697 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-208ENST00000565697 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
CNOT1-208ENST00000565697 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-208ENST00000565697 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
CNOT1-208ENST00000565697 LMOD3Q0VAK6 560 aa13.06□□□□□ -0.32
CNOT1-208ENST00000565697 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
CNOT1-208ENST00000565697 ZPR1O75312 459 aa13.05□□□□□ -0.32
CNOT1-208ENST00000565697 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-208ENST00000565697 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
CNOT1-208ENST00000565697 SOS1Q07889 1333 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-208ENST00000565697 DLG5Q8TDM6 1919 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 A0A087WZG4 1122 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 MMP10P09238 476 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
CNOT1-208ENST00000565697 GYS1P13807 737 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 RIPK4P57078 832 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 ZBTB1Q9Y2K1 713 aa13.04□□□□□ -0.32
CNOT1-208ENST00000565697 CANXP27824 592 aaKnown RBP13.03□□□□□ -0.32
CNOT1-208ENST00000565697 GPR162Q16538 588 aa13.03□□□□□ -0.32
CNOT1-208ENST00000565697 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
CNOT1-208ENST00000565697 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
CNOT1-208ENST00000565697 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
CNOT1-208ENST00000565697 COL15A1P39059 1388 aa13.03□□□□□ -0.32
CNOT1-208ENST00000565697 C4AP0C0L4 1744 aa13.02□□□□□ -0.32
CNOT1-208ENST00000565697 ANP32CO43423 234 aa13.02□□□□□ -0.33
CNOT1-208ENST00000565697 KCNQ3O43525 872 aa13.02□□□□□ -0.33
CNOT1-208ENST00000565697 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-208ENST00000565697 TMPOP42166 694 aaKnown RBP13.02□□□□□ -0.33
CNOT1-208ENST00000565697 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
CNOT1-208ENST00000565697 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
CNOT1-208ENST00000565697 NLGN2Q8NFZ4 835 aa13.01□□□□□ -0.33
CNOT1-208ENST00000565697 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
CNOT1-208ENST00000565697 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
CNOT1-208ENST00000565697 ADAMTS8Q9UP79 889 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms