RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	SCN7A	Q01118	1682 aa		30.17	■■■□□ 2.42
KIFC3-223	ENST00000565684	PLEKHF1	Q96S99	279 aa		30.16	■■■□□ 2.42
KIFC3-223	ENST00000565684	BTBD11	A6QL63	1104 aa		30.15	■■■□□ 2.42
KIFC3-223	ENST00000565684	DCTN1	Q14203	1278 aa		30.15	■■■□□ 2.42
KIFC3-223	ENST00000565684	RALBP1	Q15311	655 aa		30.15	■■■□□ 2.42
KIFC3-223	ENST00000565684	NRXN2	Q9P2S2	1712 aa		30.14	■■■□□ 2.42
KIFC3-223	ENST00000565684	KDM3B	Q7LBC6	1761 aa		30.14	■■■□□ 2.42
KIFC3-223	ENST00000565684	GRIN3B	O60391	1043 aa		30.14	■■■□□ 2.42
KIFC3-223	ENST00000565684	DDR1	Q08345	913 aa		30.14	■■■□□ 2.42
KIFC3-223	ENST00000565684	USPL1	Q5W0Q7	1092 aa		30.14	■■■□□ 2.42
KIFC3-223	ENST00000565684	ZNF784	Q8NCA9	323 aa	Predicted RBP	30.14	■■■□□ 2.42
KIFC3-223	ENST00000565684	RTF1	Q92541	710 aa	Known RBP	30.13	■■■□□ 2.41
KIFC3-223	ENST00000565684	FMNL2	Q96PY5	1086 aa		30.13	■■■□□ 2.41
KIFC3-223	ENST00000565684	WWC3	Q9ULE0	1092 aa		30.13	■■■□□ 2.41
KIFC3-223	ENST00000565684	PARP3	Q9Y6F1	533 aa		30.13	■■■□□ 2.41
KIFC3-223	ENST00000565684	HTATSF1	O43719	755 aa	Known RBP	30.12	■■■□□ 2.41
KIFC3-223	ENST00000565684	STARD3NL	O95772	234 aa		30.11	■■■□□ 2.41
KIFC3-223	ENST00000565684	CANX	P27824	592 aa	Known RBP	30.11	■■■□□ 2.41
KIFC3-223	ENST00000565684	NARF	Q9UHQ1	456 aa		30.11	■■■□□ 2.41
KIFC3-223	ENST00000565684	ZPR1	O75312	459 aa		30.1	■■■□□ 2.41
KIFC3-223	ENST00000565684	TM4SF1	P30408	202 aa		30.1	■■■□□ 2.41
KIFC3-223	ENST00000565684	EIF5	P55010	431 aa	Known RBP	30.1	■■■□□ 2.41
KIFC3-223	ENST00000565684	BCL2L12	Q9HB09	334 aa		30.1	■■■□□ 2.41
KIFC3-223	ENST00000565684	LAMB4	A4D0S4	1761 aa		30.1	■■■□□ 2.41
KIFC3-223	ENST00000565684	BCOR	Q6W2J9	1755 aa		30.1	■■■□□ 2.41
KIFC3-223	ENST00000565684	TEX13A	Q9BXU3	409 aa	Predicted RBP	30.09	■■■□□ 2.41
KIFC3-223	ENST00000565684	POLRMT	O00411	1230 aa	Known RBP	30.08	■■■□□ 2.41
KIFC3-223	ENST00000565684	TGFB2	P61812	414 aa		30.08	■■■□□ 2.41
KIFC3-223	ENST00000565684	MYBBP1A	Q9BQG0	1328 aa	Known RBP	30.07	■■■□□ 2.4
KIFC3-223	ENST00000565684	ARFGEF1	Q9Y6D6	1849 aa		30.06	■■■□□ 2.4
KIFC3-223	ENST00000565684		A0A0G2JLW4	131 aa		30.05	■■■□□ 2.4
KIFC3-223	ENST00000565684	PRAMEF22	A3QJZ6	481 aa		30.05	■■■□□ 2.4
KIFC3-223	ENST00000565684	NFE2L2	Q16236	605 aa		30.05	■■■□□ 2.4
KIFC3-223	ENST00000565684	A1BG	P04217	495 aa		30.04	■■■□□ 2.4
KIFC3-223	ENST00000565684	DLEC1	Q9Y238	1755 aa		30.03	■■■□□ 2.4
KIFC3-223	ENST00000565684	NEFM	P07197	916 aa		30.03	■■■□□ 2.4
KIFC3-223	ENST00000565684	DPEP1	P16444	411 aa		30.03	■■■□□ 2.4
KIFC3-223	ENST00000565684	NFIX	Q14938	502 aa		30.03	■■■□□ 2.4
KIFC3-223	ENST00000565684	USP16	Q9Y5T5	823 aa		30.03	■■■□□ 2.4
KIFC3-223	ENST00000565684	KCNA3	P22001	575 aa		30.02	■■■□□ 2.4
KIFC3-223	ENST00000565684	IL6ST	P40189	918 aa	Predicted RBP	30.02	■■■□□ 2.4
KIFC3-223	ENST00000565684	TAF7	Q15545	349 aa	Predicted RBP	30.02	■■■□□ 2.4
KIFC3-223	ENST00000565684	MAPK8IP3	Q9UPT6	1336 aa		30	■■■□□ 2.39
KIFC3-223	ENST00000565684		A0A087WZG4	1122 aa		29.99	■■■□□ 2.39
KIFC3-223	ENST00000565684	THUMPD2	Q9BTF0	503 aa	Known RBP	29.99	■■■□□ 2.39
KIFC3-223	ENST00000565684	PNN	Q9H307	717 aa	Known RBP	29.99	■■■□□ 2.39
KIFC3-223	ENST00000565684	MIS18A	Q9NYP9	233 aa		29.99	■■■□□ 2.39
KIFC3-223	ENST00000565684	ANKRD31	Q8N7Z5	1873 aa		29.99	■■■□□ 2.39
KIFC3-223	ENST00000565684	SNRPA1	P09661	255 aa	Known RBP	29.98	■■■□□ 2.39
KIFC3-223	ENST00000565684	ADCY9	O60503	1353 aa		29.98	■■■□□ 2.39
KIFC3-223	ENST00000565684	PIP4K2A	P48426	406 aa	Predicted RBP	29.97	■■■□□ 2.39
KIFC3-223	ENST00000565684	TBC1D2B	Q9UPU7	963 aa		29.97	■■■□□ 2.39
KIFC3-223	ENST00000565684	ZNF330	Q9Y3S2	320 aa	Predicted RBP	29.97	■■■□□ 2.39
KIFC3-223	ENST00000565684	BCS1L	Q9Y276	419 aa		29.95	■■■□□ 2.39
KIFC3-223	ENST00000565684	CARMIL3	Q8ND23	1372 aa		29.94	■■■□□ 2.38
KIFC3-223	ENST00000565684	SERPINB2	P05120	415 aa		29.94	■■■□□ 2.38
KIFC3-223	ENST00000565684	TBC1D9B	Q66K14	1250 aa		29.94	■■■□□ 2.38
KIFC3-223	ENST00000565684	PRKRIP1	Q9H875	184 aa	Predicted RBP	29.94	■■■□□ 2.38
KIFC3-223	ENST00000565684	CAMTA2	O94983	1202 aa		29.93	■■■□□ 2.38
KIFC3-223	ENST00000565684	CHRNA5	P30532	468 aa		29.93	■■■□□ 2.38
KIFC3-223	ENST00000565684	COL11A2	P13942	1736 aa	Predicted RBP	29.92	■■■□□ 2.38
KIFC3-223	ENST00000565684	ATP10D	Q9P241	1426 aa		29.92	■■■□□ 2.38
KIFC3-223	ENST00000565684	NBPF26	B4DH59	902 aa		29.91	■■■□□ 2.38
KIFC3-223	ENST00000565684	NBPF10	Q6P3W6	841 aa	Known RBP	29.91	■■■□□ 2.38
KIFC3-223	ENST00000565684	BICDL1	Q6ZP65	573 aa		29.91	■■■□□ 2.38
KIFC3-223	ENST00000565684	NBPF15	Q8N660	670 aa		29.91	■■■□□ 2.38
KIFC3-223	ENST00000565684	PNISR	Q8TF01	805 aa	Known RBP	29.91	■■■□□ 2.38
KIFC3-223	ENST00000565684	DZIP3	Q86Y13	1208 aa	Known RBP	29.9	■■■□□ 2.38
KIFC3-223	ENST00000565684	TMPO	P42166	694 aa	Known RBP	29.89	■■■□□ 2.38
KIFC3-223	ENST00000565684	PIM2	Q9P1W9	311 aa		29.89	■■■□□ 2.38
KIFC3-223	ENST00000565684	RIPK4	P57078	832 aa		29.88	■■■□□ 2.37
KIFC3-223	ENST00000565684	EIF4A1	P60842	406 aa	Known RBP	29.88	■■■□□ 2.37
KIFC3-223	ENST00000565684	ZEB1	P37275	1124 aa	Predicted RBP	29.87	■■■□□ 2.37
KIFC3-223	ENST00000565684	CCDC146	Q8IYE0	955 aa		29.87	■■■□□ 2.37
KIFC3-223	ENST00000565684	GIGYF1	O75420	1035 aa	Predicted RBP	29.86	■■■□□ 2.37
KIFC3-223	ENST00000565684	NPM2	Q86SE8	214 aa	Known RBP	29.85	■■■□□ 2.37
KIFC3-223	ENST00000565684	SBF1	O95248	1867 aa		29.85	■■■□□ 2.37
KIFC3-223	ENST00000565684	DALRD3	Q5D0E6	543 aa	Known RBP	29.84	■■■□□ 2.37
KIFC3-223	ENST00000565684	RRP7A	Q9Y3A4	280 aa	Known RBP	29.84	■■■□□ 2.37
KIFC3-223	ENST00000565684	WDR43	Q15061	677 aa	Known RBP eCLIP	29.83	■■■□□ 2.37
KIFC3-223	ENST00000565684	PRR5L	Q6MZQ0	368 aa		29.83	■■■□□ 2.37
KIFC3-223	ENST00000565684	ADAMTS8	Q9UP79	889 aa		29.83	■■■□□ 2.37
KIFC3-223	ENST00000565684	NUP98	P52948	1817 aa		29.82	■■■□□ 2.36
KIFC3-223	ENST00000565684	ARHGAP27	Q6ZUM4	889 aa		29.82	■■■□□ 2.36
KIFC3-223	ENST00000565684	CACNA1S	Q13698	1873 aa		29.81	■■■□□ 2.36
KIFC3-223	ENST00000565684	RUNDC1	Q96C34	613 aa		29.81	■■■□□ 2.36
KIFC3-223	ENST00000565684	TSPYL4	Q9UJ04	414 aa		29.8	■■■□□ 2.36
KIFC3-223	ENST00000565684	LMOD3	Q0VAK6	560 aa		29.79	■■■□□ 2.36
KIFC3-223	ENST00000565684	CLEC4G	Q6UXB4	293 aa		29.79	■■■□□ 2.36
KIFC3-223	ENST00000565684	CCDC24	Q8N4L8	307 aa		29.79	■■■□□ 2.36
KIFC3-223	ENST00000565684	SETDB2	Q96T68	719 aa		29.79	■■■□□ 2.36
KIFC3-223	ENST00000565684	ARFGEF2	Q9Y6D5	1785 aa		29.79	■■■□□ 2.36
KIFC3-223	ENST00000565684	C2CD5	Q86YS7	1000 aa		29.78	■■■□□ 2.36
KIFC3-223	ENST00000565684	TRIM35	Q9UPQ4	493 aa		29.78	■■■□□ 2.36
KIFC3-223	ENST00000565684	NEUROD2	Q15784	382 aa		29.77	■■■□□ 2.36
KIFC3-223	ENST00000565684	RGL2	O15211	777 aa		29.76	■■■□□ 2.35
KIFC3-223	ENST00000565684	BRIP1	Q9BX63	1249 aa		29.76	■■■□□ 2.35
KIFC3-223	ENST00000565684	BABAM1	Q9NWV8	329 aa		29.76	■■■□□ 2.35
KIFC3-223	ENST00000565684	C1QTNF8	P60827	252 aa		29.75	■■■□□ 2.35
KIFC3-223	ENST00000565684	CNBD1	Q8NA66	436 aa		29.75	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms