RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 COL15A1P39059 1388 aa14.59□□□□□ -0.07
NSMCE1-210ENST00000565626 HEG1Q9ULI3 1381 aa14.59□□□□□ -0.07
NSMCE1-210ENST00000565626 UBR2Q8IWV8 1755 aa14.58□□□□□ -0.08
NSMCE1-210ENST00000565626 ZPR1O75312 459 aa14.58□□□□□ -0.08
NSMCE1-210ENST00000565626 DPEP1P16444 411 aa14.58□□□□□ -0.08
NSMCE1-210ENST00000565626 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.08
NSMCE1-210ENST00000565626 BCL2L12Q9HB09 334 aa14.58□□□□□ -0.08
NSMCE1-210ENST00000565626 PRAMEF22A3QJZ6 481 aa14.57□□□□□ -0.08
NSMCE1-210ENST00000565626 STARD3NLO95772 234 aa14.57□□□□□ -0.08
NSMCE1-210ENST00000565626 TM4SF1P30408 202 aa14.57□□□□□ -0.08
NSMCE1-210ENST00000565626 FMNL2Q96PY5 1086 aa14.57□□□□□ -0.08
NSMCE1-210ENST00000565626 NARFQ9UHQ1 456 aa14.57□□□□□ -0.08
NSMCE1-210ENST00000565626 SIPA1L3O60292 1781 aaPredicted RBP14.57□□□□□ -0.08
NSMCE1-210ENST00000565626 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 A1BGP04217 495 aa14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 TGFB2P61812 414 aa14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 NFIXQ14938 502 aa14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 PLEKHF1Q96S99 279 aa14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 MIS18AQ9NYP9 233 aa14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
NSMCE1-210ENST00000565626 PIP4K2AP48426 406 aaPredicted RBP14.55□□□□□ -0.08
NSMCE1-210ENST00000565626 BCS1LQ9Y276 419 aa14.55□□□□□ -0.08
NSMCE1-210ENST00000565626 KIAA1551Q9HCM1 1747 aa14.55□□□□□ -0.08
NSMCE1-210ENST00000565626 KCNA3P22001 575 aa14.54□□□□□ -0.08
NSMCE1-210ENST00000565626 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
NSMCE1-210ENST00000565626 TBC1D2BQ9UPU7 963 aa14.54□□□□□ -0.08
NSMCE1-210ENST00000565626 USP16Q9Y5T5 823 aa14.54□□□□□ -0.08
NSMCE1-210ENST00000565626 N4BP2Q86UW6 1770 aaPredicted RBP14.54□□□□□ -0.08
NSMCE1-210ENST00000565626 KIF13BQ9NQT8 1826 aa14.54□□□□□ -0.08
NSMCE1-210ENST00000565626 HTATSF1O43719 755 aaKnown RBP14.53□□□□□ -0.08
NSMCE1-210ENST00000565626 CHRNA5P30532 468 aa14.53□□□□□ -0.08
NSMCE1-210ENST00000565626 RALBP1Q15311 655 aa14.53□□□□□ -0.08
NSMCE1-210ENST00000565626 BICDL1Q6ZP65 573 aa14.53□□□□□ -0.08
NSMCE1-210ENST00000565626 TEX13AQ9BXU3 409 aaPredicted RBP14.53□□□□□ -0.08
NSMCE1-210ENST00000565626 NFE2L2Q16236 605 aa14.52□□□□□ -0.09
NSMCE1-210ENST00000565626 IL6STP40189 918 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-210ENST00000565626 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
NSMCE1-210ENST00000565626 TBC1D9BQ66K14 1250 aa14.51□□□□□ -0.09
NSMCE1-210ENST00000565626 ATP10DQ9P241 1426 aa14.5□□□□□ -0.09
NSMCE1-210ENST00000565626 A0A087WZG4 1122 aa14.5□□□□□ -0.09
NSMCE1-210ENST00000565626 SERPINB2P05120 415 aa14.5□□□□□ -0.09
NSMCE1-210ENST00000565626 NEFMP07197 916 aa14.5□□□□□ -0.09
NSMCE1-210ENST00000565626 SNRPA1P09661 255 aaKnown RBP14.5□□□□□ -0.09
NSMCE1-210ENST00000565626 CARMIL3Q8ND23 1372 aa14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 MYBBP1AQ9BQG0 1328 aaKnown RBP14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 MAPK8IP3Q9UPT6 1336 aa14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 ARHGAP27Q6ZUM4 889 aa14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 CCDC24Q8N4L8 307 aa14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 ZNF526Q8TF50 670 aaPredicted RBP14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
NSMCE1-210ENST00000565626 ADCY9O60503 1353 aa14.48□□□□□ -0.09
NSMCE1-210ENST00000565626 NBPF26B4DH59 902 aa14.48□□□□□ -0.09
NSMCE1-210ENST00000565626 CAMTA2O94983 1202 aa14.48□□□□□ -0.09
NSMCE1-210ENST00000565626 DALRD3Q5D0E6 543 aaKnown RBP14.48□□□□□ -0.09
NSMCE1-210ENST00000565626 NBPF10Q6P3W6 841 aaKnown RBP14.48□□□□□ -0.09
NSMCE1-210ENST00000565626 NBPF15Q8N660 670 aa14.48□□□□□ -0.09
NSMCE1-210ENST00000565626 DZIP3Q86Y13 1208 aaKnown RBP14.47□□□□□ -0.09
NSMCE1-210ENST00000565626 CCDC146Q8IYE0 955 aa14.47□□□□□ -0.09
NSMCE1-210ENST00000565626 AFDNP55196 1824 aaKnown RBP14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 GIGYF1O75420 1035 aaPredicted RBP14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 C1QTNF8P60827 252 aa14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 RRP7AQ9Y3A4 280 aaKnown RBP14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 DLG5Q8TDM6 1919 aa14.46□□□□□ -0.09
NSMCE1-210ENST00000565626 BRCA1P38398 1863 aaKnown RBP14.45□□□□□ -0.1
NSMCE1-210ENST00000565626 RIPK4P57078 832 aa14.45□□□□□ -0.1
NSMCE1-210ENST00000565626 EIF4A1P60842 406 aaKnown RBP14.45□□□□□ -0.1
NSMCE1-210ENST00000565626 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 TMPOP42166 694 aaKnown RBP14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 PRR5LQ6MZQ0 368 aa14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 C2CD5Q86YS7 1000 aa14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 PNISRQ8TF01 805 aaKnown RBP14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 PRKRIP1Q9H875 184 aaPredicted RBP14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 GPBP1L1Q9HC44 474 aaPredicted RBP14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 SCN7AQ01118 1682 aa14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 CEP350Q5VT06 3117 aa14.44□□□□□ -0.1
NSMCE1-210ENST00000565626 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
NSMCE1-210ENST00000565626 NGEFQ8N5V2 710 aa14.43□□□□□ -0.1
NSMCE1-210ENST00000565626 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
NSMCE1-210ENST00000565626 C9orf131Q5VYM1 1079 aa14.42□□□□□ -0.1
NSMCE1-210ENST00000565626 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
NSMCE1-210ENST00000565626 ADAMTS8Q9UP79 889 aa14.42□□□□□ -0.1
NSMCE1-210ENST00000565626 H0YIN7 160 aa14.41□□□□□ -0.1
NSMCE1-210ENST00000565626 WDR43Q15061 677 aaKnown RBP eCLIP14.41□□□□□ -0.1
NSMCE1-210ENST00000565626 HLFQ16534 295 aa14.41□□□□□ -0.1
NSMCE1-210ENST00000565626 CNBD1Q8NA66 436 aa14.41□□□□□ -0.1
NSMCE1-210ENST00000565626 KDM3BQ7LBC6 1761 aa14.41□□□□□ -0.1
NSMCE1-210ENST00000565626 RASSF7Q02833 373 aa14.4□□□□□ -0.1
NSMCE1-210ENST00000565626 TTLL7Q6ZT98 887 aa14.4□□□□□ -0.1
NSMCE1-210ENST00000565626 TTLL6Q8N841 843 aa14.4□□□□□ -0.1
NSMCE1-210ENST00000565626 ZNF622Q969S3 477 aaKnown RBP eCLIP14.4□□□□□ -0.1
NSMCE1-210ENST00000565626 BRIP1Q9BX63 1249 aa14.4□□□□□ -0.1
NSMCE1-210ENST00000565626 ARFGEF1Q9Y6D6 1849 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 SENP3-EIF4A1A0A087X0R7 540 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 FAM177BA6PVY3 158 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 NPHP1O15259 732 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 MYL6BP14649 208 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 PRELPP51888 382 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms