RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 GLI3P10071 1580 aa11.88□□□□□ -0.51
CNEP1R1-206ENST00000565556 KAT6BQ8WYB5 2073 aa11.88□□□□□ -0.51
CNEP1R1-206ENST00000565556 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
CNEP1R1-206ENST00000565556 EIF2S2P20042 333 aaKnown RBP11.88□□□□□ -0.51
CNEP1R1-206ENST00000565556 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
CNEP1R1-206ENST00000565556 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
CNEP1R1-206ENST00000565556 DOT1LQ8TEK3 1739 aa11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 BCL9O00512 1426 aa11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 A0A0G2JS52 829 aa11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 RLBP1P12271 317 aa11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 ZNF772Q68DY9 489 aaPredicted RBP11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 PIGBQ92521 554 aa11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 DBF4Q9UBU7 674 aaPredicted RBP11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 COG6Q9Y2V7 657 aa11.87□□□□□ -0.51
CNEP1R1-206ENST00000565556 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 ABCC4O15439 1325 aa11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 LAMB4A4D0S4 1761 aa11.86□□□□□ -0.51
CNEP1R1-206ENST00000565556 C5P01031 1676 aa11.85□□□□□ -0.51
CNEP1R1-206ENST00000565556 KCPQ6ZWJ8 1503 aa11.85□□□□□ -0.51
CNEP1R1-206ENST00000565556 FLIIQ13045 1269 aa11.85□□□□□ -0.51
CNEP1R1-206ENST00000565556 SYTL4Q96C24 671 aaPredicted RBP11.85□□□□□ -0.51
CNEP1R1-206ENST00000565556 TEX13AQ9BXU3 409 aaPredicted RBP11.85□□□□□ -0.51
CNEP1R1-206ENST00000565556 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
CNEP1R1-206ENST00000565556 ITPRIPQ8IWB1 547 aa11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
CNEP1R1-206ENST00000565556 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 G2E3Q7L622 706 aa11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 ASAP1Q9ULH1 1129 aa11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
CNEP1R1-206ENST00000565556 RGS12O14924 1447 aa11.82□□□□□ -0.52
CNEP1R1-206ENST00000565556 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
CNEP1R1-206ENST00000565556 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
CNEP1R1-206ENST00000565556 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
CNEP1R1-206ENST00000565556 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
CNEP1R1-206ENST00000565556 RBM6P78332 1123 aaKnown RBP11.81□□□□□ -0.52
CNEP1R1-206ENST00000565556 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
CNEP1R1-206ENST00000565556 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
CNEP1R1-206ENST00000565556 GSE1Q14687 1217 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 PDIA6Q15084 440 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 SKAP1Q86WV1 359 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 PHAXQ9H814 394 aaKnown RBP11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 N4BP2Q86UW6 1770 aaPredicted RBP11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 STARD3NLO95772 234 aa11.8□□□□□ -0.52
CNEP1R1-206ENST00000565556 NHSQ6T4R5 1651 aa11.79□□□□□ -0.52
CNEP1R1-206ENST00000565556 ZBTB7BO15156 539 aaPredicted RBP11.79□□□□□ -0.52
CNEP1R1-206ENST00000565556 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
CNEP1R1-206ENST00000565556 ZBTB40Q9NUA8 1239 aa11.79□□□□□ -0.52
CNEP1R1-206ENST00000565556 F6X3S4 739 aa11.78□□□□□ -0.52
CNEP1R1-206ENST00000565556 ANXA1P04083 346 aa11.78□□□□□ -0.52
CNEP1R1-206ENST00000565556 SLC4A10Q6U841 1118 aa11.78□□□□□ -0.52
CNEP1R1-206ENST00000565556 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
CNEP1R1-206ENST00000565556 ZNF831Q5JPB2 1677 aa11.78□□□□□ -0.52
CNEP1R1-206ENST00000565556 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 KCNQ2O43526 872 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 MYL6BP14649 208 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 SBF2Q86WG5 1849 aa11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.52
CNEP1R1-206ENST00000565556 BRWD3Q6RI45 1802 aa11.77□□□□□ -0.53
CNEP1R1-206ENST00000565556 PALLDQ8WX93 1383 aa11.77□□□□□ -0.53
CNEP1R1-206ENST00000565556 RXRBP28702 533 aa11.77□□□□□ -0.53
CNEP1R1-206ENST00000565556 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
CNEP1R1-206ENST00000565556 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
CNEP1R1-206ENST00000565556 ADCY9O60503 1353 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 SIK1P57059 783 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 SRCIN1Q9C0H9 1055 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 BTAF1O14981 1849 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 TJP1Q07157 1748 aa11.76□□□□□ -0.53
CNEP1R1-206ENST00000565556 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
CNEP1R1-206ENST00000565556 A1BGP04217 495 aa11.75□□□□□ -0.53
CNEP1R1-206ENST00000565556 GNAI3P08754 354 aa11.75□□□□□ -0.53
CNEP1R1-206ENST00000565556 CYP19A1P11511 503 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms