RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 TOGARAM1Q9Y4F4 1720 aa31.56■■■□□ 2.64
LINC01003-201ENST00000564834 PROSER3Q2NL68 480 aa31.56■■■□□ 2.64
LINC01003-201ENST00000564834 SRCIN1Q9C0H9 1055 aa31.55■■■□□ 2.64
LINC01003-201ENST00000564834 ANKRD45Q5TZF3 282 aa31.53■■■□□ 2.64
LINC01003-201ENST00000564834 LNPKQ9C0E8 428 aa31.53■■■□□ 2.64
LINC01003-201ENST00000564834 HMMRO75330 724 aa31.53■■■□□ 2.64
LINC01003-201ENST00000564834 ANP32AP39687 249 aaKnown RBP31.53■■■□□ 2.64
LINC01003-201ENST00000564834 PDIA6Q15084 440 aa31.53■■■□□ 2.64
LINC01003-201ENST00000564834 UBAP1LF5GYI3 381 aa31.52■■■□□ 2.64
LINC01003-201ENST00000564834 NWD2Q9ULI1 1742 aa31.52■■■□□ 2.64
LINC01003-201ENST00000564834 BEND3Q5T5X7 828 aa31.51■■■□□ 2.64
LINC01003-201ENST00000564834 USP44Q9H0E7 712 aa31.51■■■□□ 2.64
LINC01003-201ENST00000564834 ADAMTS2O95450 1211 aa31.51■■■□□ 2.63
LINC01003-201ENST00000564834 KSR2Q6VAB6 950 aa31.51■■■□□ 2.63
LINC01003-201ENST00000564834 KCPQ6ZWJ8 1503 aa31.49■■■□□ 2.63
LINC01003-201ENST00000564834 DDX58O95786 925 aaKnown RBP31.48■■■□□ 2.63
LINC01003-201ENST00000564834 UBTFL1P0CB47 393 aaPredicted RBP31.48■■■□□ 2.63
LINC01003-201ENST00000564834 TNS2Q63HR2 1409 aa31.47■■■□□ 2.63
LINC01003-201ENST00000564834 MAP3K2Q9Y2U5 619 aa31.47■■■□□ 2.63
LINC01003-201ENST00000564834 ITGB4P16144 1822 aa31.46■■■□□ 2.63
LINC01003-201ENST00000564834 USP16Q9Y5T5 823 aa31.46■■■□□ 2.63
LINC01003-201ENST00000564834 LRP6O75581 1613 aa31.46■■■□□ 2.63
LINC01003-201ENST00000564834 ALDH1L1O75891 902 aa31.44■■■□□ 2.62
LINC01003-201ENST00000564834 LRRFIP2Q9Y608 721 aaKnown RBP31.44■■■□□ 2.62
LINC01003-201ENST00000564834 THRAP3Q9Y2W1 955 aaKnown RBP31.43■■■□□ 2.62
LINC01003-201ENST00000564834 NUTM2BA6NNL0 878 aaPredicted RBP31.43■■■□□ 2.62
LINC01003-201ENST00000564834 NUTM2EB1AL46 878 aaPredicted RBP31.43■■■□□ 2.62
LINC01003-201ENST00000564834 NUTM2AQ8IVF1 878 aaPredicted RBP31.43■■■□□ 2.62
LINC01003-201ENST00000564834 CDCA7Q9BWT1 371 aaPredicted RBP31.43■■■□□ 2.62
LINC01003-201ENST00000564834 TMOD3Q9NYL9 352 aa31.43■■■□□ 2.62
LINC01003-201ENST00000564834 ERBB4Q15303 1308 aa31.42■■■□□ 2.62
LINC01003-201ENST00000564834 SPATA31A1Q5TZJ5 1347 aa31.42■■■□□ 2.62
LINC01003-201ENST00000564834 SLIT2O94813 1529 aa31.42■■■□□ 2.62
LINC01003-201ENST00000564834 ATP8B2P98198 1209 aa31.42■■■□□ 2.62
LINC01003-201ENST00000564834 LRP10Q7Z4F1 713 aa31.42■■■□□ 2.62
LINC01003-201ENST00000564834 MYL6BP14649 208 aa31.41■■■□□ 2.62
LINC01003-201ENST00000564834 NPM2Q86SE8 214 aaKnown RBP31.41■■■□□ 2.62
LINC01003-201ENST00000564834 EXOC5O00471 708 aa31.4■■■□□ 2.62
LINC01003-201ENST00000564834 AIMP1Q12904 312 aaKnown RBP31.4■■■□□ 2.62
LINC01003-201ENST00000564834 ZBTB47Q9UFB7 747 aaPredicted RBP31.4■■■□□ 2.62
LINC01003-201ENST00000564834 IBTKQ9P2D0 1353 aaPredicted RBP31.39■■■□□ 2.61
LINC01003-201ENST00000564834 LINS1Q8NG48 757 aa31.38■■■□□ 2.61
LINC01003-201ENST00000564834 XAGE3Q8WTP9 111 aa31.38■■■□□ 2.61
LINC01003-201ENST00000564834 KAT6BQ8WYB5 2073 aa31.38■■■□□ 2.61
LINC01003-201ENST00000564834 PNMA6EA0A0J9YXQ4 647 aa31.37■■■□□ 2.61
LINC01003-201ENST00000564834 NBPF7P0C2Y1 421 aaPredicted RBP31.37■■■□□ 2.61
LINC01003-201ENST00000564834 COPS6Q7L5N1 327 aa31.37■■■□□ 2.61
LINC01003-201ENST00000564834 JCADQ9P266 1359 aa31.37■■■□□ 2.61
LINC01003-201ENST00000564834 RIC3Q7Z5B4 369 aa31.36■■■□□ 2.61
LINC01003-201ENST00000564834 BMP2KLQ5H9B9 411 aa31.35■■■□□ 2.61
LINC01003-201ENST00000564834 ARFGEF2Q9Y6D5 1785 aa31.35■■■□□ 2.61
LINC01003-201ENST00000564834 SPATA31A5Q5VU36 1347 aa31.35■■■□□ 2.61
LINC01003-201ENST00000564834 SPATA31A7Q8IWB4 1347 aa31.35■■■□□ 2.61
LINC01003-201ENST00000564834 PIGBQ92521 554 aa31.34■■■□□ 2.61
LINC01003-201ENST00000564834 IPO9Q96P70 1041 aaKnown RBP31.34■■■□□ 2.61
LINC01003-201ENST00000564834 HDAC5Q9UQL6 1122 aa31.34■■■□□ 2.61
LINC01003-201ENST00000564834 PTCD1O75127 700 aaKnown RBP31.33■■■□□ 2.61
LINC01003-201ENST00000564834 ANKRD13DQ6ZTN6 518 aa31.33■■■□□ 2.61
LINC01003-201ENST00000564834 SSH3Q8TE77 659 aa31.33■■■□□ 2.61
LINC01003-201ENST00000564834 C9orf78Q9NZ63 289 aaPredicted RBP31.33■■■□□ 2.61
LINC01003-201ENST00000564834 BCL9O00512 1426 aa31.32■■■□□ 2.6
LINC01003-201ENST00000564834 NEXNQ0ZGT2 675 aa31.32■■■□□ 2.6
LINC01003-201ENST00000564834 CWF19L2Q2TBE0 894 aaKnown RBP31.32■■■□□ 2.6
LINC01003-201ENST00000564834 METTL22Q9BUU2 404 aaPredicted RBP31.31■■■□□ 2.6
LINC01003-201ENST00000564834 DOT1LQ8TEK3 1739 aa31.31■■■□□ 2.6
LINC01003-201ENST00000564834 UTYO14607 1347 aa31.3■■■□□ 2.6
LINC01003-201ENST00000564834 MSH5O43196 834 aa31.3■■■□□ 2.6
LINC01003-201ENST00000564834 PIP4K2AP48426 406 aaPredicted RBP31.3■■■□□ 2.6
LINC01003-201ENST00000564834 PLEKHM2Q8IWE5 1019 aa31.3■■■□□ 2.6
LINC01003-201ENST00000564834 AFDNP55196 1824 aaKnown RBP31.3■■■□□ 2.6
LINC01003-201ENST00000564834 SEC24BO95487 1268 aa31.3■■■□□ 2.6
LINC01003-201ENST00000564834 POLA2Q14181 598 aa31.3■■■□□ 2.6
LINC01003-201ENST00000564834 BARGINQ6ZT62 677 aa31.29■■■□□ 2.6
LINC01003-201ENST00000564834 PPP1R42Q7Z4L9 355 aa31.29■■■□□ 2.6
LINC01003-201ENST00000564834 VSIG10Q8N0Z9 540 aa31.29■■■□□ 2.6
LINC01003-201ENST00000564834 EXOC6BQ9Y2D4 811 aa31.29■■■□□ 2.6
LINC01003-201ENST00000564834 NBPF26B4DH59 902 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 GRM8O00222 908 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 IGKV5-2P06315 115 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 DDB1Q16531 1140 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 NBPF14Q5TI25 921 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 NBPF10Q6P3W6 841 aaKnown RBP31.28■■■□□ 2.6
LINC01003-201ENST00000564834 NBPF15Q8N660 670 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 ASAP1Q9ULH1 1129 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 APBB1O00213 710 aa31.28■■■□□ 2.6
LINC01003-201ENST00000564834 MTX1Q13505 466 aa31.27■■■□□ 2.6
LINC01003-201ENST00000564834 ATG3Q9NT62 314 aa31.27■■■□□ 2.6
LINC01003-201ENST00000564834 NUP188Q5SRE5 1749 aa31.27■■■□□ 2.6
LINC01003-201ENST00000564834 NEURL1BA8MQ27 555 aa31.26■■■□□ 2.59
LINC01003-201ENST00000564834 SMARCA5O60264 1052 aaPredicted RBP31.26■■■□□ 2.59
LINC01003-201ENST00000564834 UNC5CLQ8IV45 518 aa31.26■■■□□ 2.59
LINC01003-201ENST00000564834 PLBD2Q8NHP8 589 aa31.26■■■□□ 2.59
LINC01003-201ENST00000564834 TEX13AQ9BXU3 409 aaPredicted RBP31.26■■■□□ 2.59
LINC01003-201ENST00000564834 LRRCC1Q9C099 1032 aa31.25■■■□□ 2.59
LINC01003-201ENST00000564834 SRGAP3O43295 1099 aa31.25■■■□□ 2.59
LINC01003-201ENST00000564834 C16orf71Q8IYS4 520 aaPredicted RBP31.25■■■□□ 2.59
LINC01003-201ENST00000564834 MYD88Q99836 296 aa31.25■■■□□ 2.59
LINC01003-201ENST00000564834 UPF2Q9HAU5 1272 aaKnown RBP31.25■■■□□ 2.59
LINC01003-201ENST00000564834 CCDC9Q9Y3X0 531 aaKnown RBP31.24■■■□□ 2.59
LINC01003-201ENST00000564834 A1BGP04217 495 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 718.5 ms