RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 SHPRHQ149N8 1683 aa8.04□□□□□ -1.12
TUBGCP4-209ENST00000564511 RGS12O14924 1447 aa8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 CHD2O14647 1828 aaKnown RBP8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 LILRB3O75022 631 aa8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 DDX17Q92841 729 aaKnown RBP8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 DAPK1P53355 1430 aa8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 VPS8Q8N3P4 1428 aa8.03□□□□□ -1.12
TUBGCP4-209ENST00000564511 PIK3R4Q99570 1358 aa8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 TREML4Q6UXN2 200 aa8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 MAP10Q9P2G4 905 aa8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 WASF2Q9Y6W5 498 aa8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 EP400Q96L91 3159 aa8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 SETD5Q9C0A6 1442 aa8.02□□□□□ -1.13
TUBGCP4-209ENST00000564511 DIP2AQ14689 1571 aa8.01□□□□□ -1.13
TUBGCP4-209ENST00000564511 ATAD2Q6PL18 1390 aa8.01□□□□□ -1.13
TUBGCP4-209ENST00000564511 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
TUBGCP4-209ENST00000564511 VARSP26640 1264 aaKnown RBP8.01□□□□□ -1.13
TUBGCP4-209ENST00000564511 ADAMTS13Q76LX8 1427 aa8.01□□□□□ -1.13
TUBGCP4-209ENST00000564511 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
TUBGCP4-209ENST00000564511 USP21Q9UK80 565 aa8□□□□□ -1.13
TUBGCP4-209ENST00000564511 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
TUBGCP4-209ENST00000564511 RPRD2Q5VT52 1461 aaKnown RBP8□□□□□ -1.13
TUBGCP4-209ENST00000564511 PTPN23Q9H3S7 1636 aa8□□□□□ -1.13
TUBGCP4-209ENST00000564511 PNPLA6Q8IY17 1366 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 ASXL1Q8IXJ9 1541 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 SLC24A1O60721 1099 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 MPNDQ8N594 471 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 TSC1Q92574 1164 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 PTPRUQ92729 1446 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 FOXJ1Q92949 421 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 TRPC5Q9UL62 973 aaPredicted RBP7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 TMEM131LA2VDJ0 1609 aa7.99□□□□□ -1.13
TUBGCP4-209ENST00000564511 CROCC2H7BZ55 1655 aa7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 DCCP43146 1447 aa7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 MST1RQ04912 1400 aa7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 LOC105371045A0A1W2PR82 267 aa7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 CAPN5O15484 640 aaPredicted RBP7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 CLK2P49760 499 aaKnown RBP7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 CCDC125Q86Z20 511 aa7.98□□□□□ -1.13
TUBGCP4-209ENST00000564511 ANKRD50Q9ULJ7 1429 aa7.97□□□□□ -1.13
TUBGCP4-209ENST00000564511 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
TUBGCP4-209ENST00000564511 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
TUBGCP4-209ENST00000564511 RSPH6AQ9H0K4 717 aa7.97□□□□□ -1.13
TUBGCP4-209ENST00000564511 GCC2Q8IWJ2 1684 aa7.97□□□□□ -1.13
TUBGCP4-209ENST00000564511 TRPM2O94759 1503 aa7.97□□□□□ -1.13
TUBGCP4-209ENST00000564511 MYO5BQ9ULV0 1848 aa7.96□□□□□ -1.13
TUBGCP4-209ENST00000564511 FAM50AQ14320 339 aaKnown RBP7.96□□□□□ -1.14
TUBGCP4-209ENST00000564511 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
TUBGCP4-209ENST00000564511 FNBP4Q8N3X1 1017 aaPredicted RBP7.96□□□□□ -1.14
TUBGCP4-209ENST00000564511 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
TUBGCP4-209ENST00000564511 WFS1O76024 890 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 BMP1P13497 986 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 NFX1Q12986 1120 aaKnown RBP7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 NNTQ13423 1086 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 ZNF326Q5BKZ1 582 aaKnown RBP7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 ORAI2Q96SN7 254 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 GPBP1L1Q9HC44 474 aaPredicted RBP7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 NHSL1Q5SYE7 1610 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 METP08581 1390 aa7.95□□□□□ -1.14
TUBGCP4-209ENST00000564511 CDK15Q96Q40 435 aa7.94□□□□□ -1.14
TUBGCP4-209ENST00000564511 ADGRL2O95490 1459 aa7.94□□□□□ -1.14
TUBGCP4-209ENST00000564511 HELBQ8NG08 1087 aaPredicted RBP7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 GJD4Q96KN9 370 aaPredicted RBP7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 KDM4CQ9H3R0 1056 aa7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 ADGRL3Q9HAR2 1447 aa7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 C1orf167Q5SNV9 1468 aa7.93□□□□□ -1.14
TUBGCP4-209ENST00000564511 ADH1CP00326 375 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 CTDSPL2Q05D32 466 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 AGERQ15109 404 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 SKIV2LQ15477 1246 aaKnown RBP7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 DEFB132Q7Z7B7 95 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 BPHLQ86WA6 291 aaPredicted RBP7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 FAM117AQ9C073 453 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 ATRNO75882 1429 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 PTCH1Q13635 1447 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 UNC13BO14795 1591 aa7.92□□□□□ -1.14
TUBGCP4-209ENST00000564511 TERTO14746 1132 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 TIMP2P16035 220 aa7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 GRM5P41594 1212 aa7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 WDR4P57081 412 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 SH3RF1Q7Z6J0 888 aa7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 ARMC2Q8NEN0 867 aa7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 NUP155O75694 1391 aa7.91□□□□□ -1.14
TUBGCP4-209ENST00000564511 XRN1Q8IZH2 1706 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms