RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 APAF1O14727 1248 aa23.97■■□□□ 1.43
PKD1-227ENST00000564313 DIEXFQ68CQ4 756 aaKnown RBP23.97■■□□□ 1.43
PKD1-227ENST00000564313 ZNF496Q96IT1 587 aaPredicted RBP23.97■■□□□ 1.43
PKD1-227ENST00000564313 BABAM1Q9NWV8 329 aa23.97■■□□□ 1.43
PKD1-227ENST00000564313 GNPATO15228 680 aa23.96■■□□□ 1.43
PKD1-227ENST00000564313 AMIGO3Q86WK7 504 aa23.96■■□□□ 1.43
PKD1-227ENST00000564313 KDM3BQ7LBC6 1761 aa23.96■■□□□ 1.43
PKD1-227ENST00000564313 CCER2I3L3R5 266 aa23.95■■□□□ 1.42
PKD1-227ENST00000564313 MSH5O43196 834 aa23.95■■□□□ 1.42
PKD1-227ENST00000564313 THUMPD2Q9BTF0 503 aaKnown RBP23.95■■□□□ 1.42
PKD1-227ENST00000564313 GPBP1L1Q9HC44 474 aaPredicted RBP23.95■■□□□ 1.42
PKD1-227ENST00000564313 ADRA2BP18089 450 aa23.94■■□□□ 1.42
PKD1-227ENST00000564313 CRKLP46109 303 aaKnown RBP23.94■■□□□ 1.42
PKD1-227ENST00000564313 DNAJC10Q8IXB1 793 aa23.94■■□□□ 1.42
PKD1-227ENST00000564313 TRIM35Q9UPQ4 493 aa23.94■■□□□ 1.42
PKD1-227ENST00000564313 RTCBQ9Y3I0 505 aaKnown RBP23.94■■□□□ 1.42
PKD1-227ENST00000564313 STARD3NLO95772 234 aa23.93■■□□□ 1.42
PKD1-227ENST00000564313 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
PKD1-227ENST00000564313 NCBP3Q53F19 620 aaKnown RBP23.93■■□□□ 1.42
PKD1-227ENST00000564313 SMIM5Q71RC9 77 aa23.93■■□□□ 1.42
PKD1-227ENST00000564313 RPS6KA4O75676 772 aa23.92■■□□□ 1.42
PKD1-227ENST00000564313 MYH14Q7Z406 1995 aaKnown RBP23.92■■□□□ 1.42
PKD1-227ENST00000564313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.91■■□□□ 1.42
PKD1-227ENST00000564313 KCNQ3O43525 872 aa23.91■■□□□ 1.42
PKD1-227ENST00000564313 PHF14O94880 888 aa23.91■■□□□ 1.42
PKD1-227ENST00000564313 CYP19A1P11511 503 aaPredicted RBP23.91■■□□□ 1.42
PKD1-227ENST00000564313 CCDC87Q9NVE4 849 aa23.91■■□□□ 1.42
PKD1-227ENST00000564313 SNRPA1P09661 255 aaKnown RBP23.9■■□□□ 1.42
PKD1-227ENST00000564313 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
PKD1-227ENST00000564313 TSPYL4Q9UJ04 414 aa23.9■■□□□ 1.42
PKD1-227ENST00000564313 CCDC27Q2M243 656 aa23.89■■□□□ 1.41
PKD1-227ENST00000564313 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
PKD1-227ENST00000564313 ZNF526Q8TF50 670 aaPredicted RBP23.89■■□□□ 1.41
PKD1-227ENST00000564313 MIS18AQ9NYP9 233 aa23.88■■□□□ 1.41
PKD1-227ENST00000564313 ADCY9O60503 1353 aa23.88■■□□□ 1.41
PKD1-227ENST00000564313 INTS5Q6P9B9 1019 aaKnown RBP23.87■■□□□ 1.41
PKD1-227ENST00000564313 NGEFQ8N5V2 710 aa23.87■■□□□ 1.41
PKD1-227ENST00000564313 EIF4A1P60842 406 aaKnown RBP23.86■■□□□ 1.41
PKD1-227ENST00000564313 MSL1Q68DK7 614 aa23.86■■□□□ 1.41
PKD1-227ENST00000564313 LAMB4A4D0S4 1761 aa23.86■■□□□ 1.41
PKD1-227ENST00000564313 CHL1O00533 1208 aa23.85■■□□□ 1.41
PKD1-227ENST00000564313 CFAP44Q96MT7 982 aa23.85■■□□□ 1.41
PKD1-227ENST00000564313 SOS1Q07889 1333 aaPredicted RBP23.84■■□□□ 1.41
PKD1-227ENST00000564313 RFC4P35249 363 aa23.84■■□□□ 1.41
PKD1-227ENST00000564313 ZBTB1Q9Y2K1 713 aa23.84■■□□□ 1.41
PKD1-227ENST00000564313 ARHGEF1Q92888 912 aaKnown RBP23.83■■□□□ 1.41
PKD1-227ENST00000564313 IFT57Q9NWB7 429 aa23.83■■□□□ 1.41
PKD1-227ENST00000564313 C4AP0C0L4 1744 aa23.83■■□□□ 1.41
PKD1-227ENST00000564313 GNAI1P63096 354 aa23.82■■□□□ 1.4
PKD1-227ENST00000564313 LAS1LQ9Y4W2 734 aaKnown RBP23.82■■□□□ 1.4
PKD1-227ENST00000564313 COL15A1P39059 1388 aa23.81■■□□□ 1.4
PKD1-227ENST00000564313 NPM2Q86SE8 214 aaKnown RBP23.81■■□□□ 1.4
PKD1-227ENST00000564313 USP16Q9Y5T5 823 aa23.81■■□□□ 1.4
PKD1-227ENST00000564313 A0A087WZG4 1122 aa23.8■■□□□ 1.4
PKD1-227ENST00000564313 CANXP27824 592 aaKnown RBP23.8■■□□□ 1.4
PKD1-227ENST00000564313 IL6STP40189 918 aaPredicted RBP23.8■■□□□ 1.4
PKD1-227ENST00000564313 WWC1Q8IX03 1113 aa23.8■■□□□ 1.4
PKD1-227ENST00000564313 CD2APQ9Y5K6 639 aa23.8■■□□□ 1.4
PKD1-227ENST00000564313 ZNF853P0CG23 659 aa23.79■■□□□ 1.4
PKD1-227ENST00000564313 PRAMEF22A3QJZ6 481 aa23.78■■□□□ 1.4
PKD1-227ENST00000564313 EIF5P55010 431 aaKnown RBP23.78■■□□□ 1.4
PKD1-227ENST00000564313 NLGN1Q8N2Q7 840 aa23.78■■□□□ 1.4
PKD1-227ENST00000564313 IL16Q14005 1332 aa23.78■■□□□ 1.4
PKD1-227ENST00000564313 USP42Q9H9J4 1324 aaKnown RBP23.78■■□□□ 1.4
PKD1-227ENST00000564313 KIF3CO14782 793 aa23.77■■□□□ 1.4
PKD1-227ENST00000564313 ZPR1O75312 459 aa23.77■■□□□ 1.4
PKD1-227ENST00000564313 A1BGP04217 495 aa23.77■■□□□ 1.4
PKD1-227ENST00000564313 HOXB7P09629 217 aa23.76■■□□□ 1.39
PKD1-227ENST00000564313 MIER1Q8N108 512 aa23.76■■□□□ 1.39
PKD1-227ENST00000564313 MBIPQ9NS73 344 aa23.76■■□□□ 1.39
PKD1-227ENST00000564313 ERBB4Q15303 1308 aa23.76■■□□□ 1.39
PKD1-227ENST00000564313 WDR63Q8IWG1 891 aa23.75■■□□□ 1.39
PKD1-227ENST00000564313 NARFQ9UHQ1 456 aa23.75■■□□□ 1.39
PKD1-227ENST00000564313 GYS1P13807 737 aa23.74■■□□□ 1.39
PKD1-227ENST00000564313 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
PKD1-227ENST00000564313 APLP1P51693 650 aa23.72■■□□□ 1.39
PKD1-227ENST00000564313 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
PKD1-227ENST00000564313 WWC3Q9ULE0 1092 aa23.72■■□□□ 1.39
PKD1-227ENST00000564313 DNAJC5GQ8N7S2 189 aa23.71■■□□□ 1.39
PKD1-227ENST00000564313 CHMP4AQ9BY43 222 aa23.71■■□□□ 1.39
PKD1-227ENST00000564313 SCN7AQ01118 1682 aa23.7■■□□□ 1.39
PKD1-227ENST00000564313 MMP10P09238 476 aa23.7■■□□□ 1.38
PKD1-227ENST00000564313 USPL1Q5W0Q7 1092 aa23.7■■□□□ 1.38
PKD1-227ENST00000564313 NBPF26B4DH59 902 aa23.69■■□□□ 1.38
PKD1-227ENST00000564313 RGL2O15211 777 aa23.69■■□□□ 1.38
PKD1-227ENST00000564313 NBPF10Q6P3W6 841 aaKnown RBP23.69■■□□□ 1.38
PKD1-227ENST00000564313 NBPF15Q8N660 670 aa23.69■■□□□ 1.38
PKD1-227ENST00000564313 SALL2Q9Y467 1007 aaPredicted RBP23.69■■□□□ 1.38
PKD1-227ENST00000564313 DZIP3Q86Y13 1208 aaKnown RBP23.68■■□□□ 1.38
PKD1-227ENST00000564313 BCORQ6W2J9 1755 aa23.68■■□□□ 1.38
PKD1-227ENST00000564313 EIF2S2P20042 333 aaKnown RBP23.67■■□□□ 1.38
PKD1-227ENST00000564313 FKBP8Q14318 412 aa23.67■■□□□ 1.38
PKD1-227ENST00000564313 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
PKD1-227ENST00000564313 PIP4K2AP48426 406 aaPredicted RBP23.66■■□□□ 1.38
PKD1-227ENST00000564313 PARP3Q9Y6F1 533 aa23.66■■□□□ 1.38
PKD1-227ENST00000564313 KRT24Q2M2I5 525 aa23.65■■□□□ 1.38
PKD1-227ENST00000564313 HDGFL1Q5TGJ6 251 aa23.65■■□□□ 1.38
PKD1-227ENST00000564313 TBC1D2BQ9UPU7 963 aa23.65■■□□□ 1.38
PKD1-227ENST00000564313 ZNF652Q9Y2D9 606 aa23.65■■□□□ 1.38
PKD1-227ENST00000564313 CAMTA2O94983 1202 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms