RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 GDF9O60383 454 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 PRMT3O60678 531 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 LGR5O75473 907 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 STAU1O95793 577 aaKnown RBP9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 ATP2B4P23634 1241 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 SSFA2P28290 1259 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
HERPUD1-208ENST00000563911 BCORL1Q5H9F3 1711 aa9.74□□□□□ -0.85
HERPUD1-208ENST00000563911 GDF10P55107 478 aa9.74□□□□□ -0.85
HERPUD1-208ENST00000563911 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
HERPUD1-208ENST00000563911 PRIMPOLQ96LW4 560 aa9.74□□□□□ -0.85
HERPUD1-208ENST00000563911 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 TMEM229AB2RXF0 380 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 M0R2N6 131 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 BACH1O14867 736 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 GNRH1P01148 92 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 SCNN1DP51172 638 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 PHLDB3Q6NSJ2 640 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 SERTAD1Q9UHV2 236 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 IVNS1ABPQ9Y6Y0 642 aa9.73□□□□□ -0.85
HERPUD1-208ENST00000563911 INHAP05111 366 aa9.72□□□□□ -0.85
HERPUD1-208ENST00000563911 ETNK1Q9HBU6 452 aa9.72□□□□□ -0.85
HERPUD1-208ENST00000563911 ABCA9Q8IUA7 1624 aa9.71□□□□□ -0.85
HERPUD1-208ENST00000563911 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 WDR4P57081 412 aaKnown RBP9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 CBLBQ13191 982 aa9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 ESCO1Q5FWF5 840 aa9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 ITPKCQ96DU7 683 aa9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 TOR4AQ9NXH8 423 aa9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
HERPUD1-208ENST00000563911 ARID4AP29374 1257 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-208ENST00000563911 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
HERPUD1-208ENST00000563911 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
HERPUD1-208ENST00000563911 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
HERPUD1-208ENST00000563911 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
HERPUD1-208ENST00000563911 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 ADH1AP07327 375 aa9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 SMPD1P17405 629 aa9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 OCLNQ16625 522 aa9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 RIMS1Q86UR5 1692 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 PRXQ9BXM0 1461 aa9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 CXXC1Q9P0U4 656 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-208ENST00000563911 CTTNBP2Q8WZ74 1663 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 GOLGA3Q08378 1498 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 NEO1Q92859 1461 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 PHLDB1Q86UU1 1377 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 PRR20EP86478 221 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 PRR20CP86479 221 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 PRR20DP86480 221 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 PRR20BP86481 221 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 PRR20AP86496 221 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 GNEQ9Y223 722 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-208ENST00000563911 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 WEE1P30291 646 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 SCNN1AP37088 669 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 TMCO4Q5TGY1 634 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 Q6ZVU0 165 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 AGBL1Q96MI9 1066 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 SLC4A9Q96Q91 983 aa9.67□□□□□ -0.86
HERPUD1-208ENST00000563911 A0A1W2PRU2 124 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 TIMP2P16035 220 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 GAS2L2Q8NHY3 880 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 C1orf216Q8TAB5 229 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 SCG3Q8WXD2 468 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 HPS1Q92902 700 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 XAGE2Q96GT9 111 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
HERPUD1-208ENST00000563911 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 IL2RAP01589 272 aa9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 PTGIRP43119 386 aa9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 SMTNP53814 917 aa9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 RELBQ01201 579 aa9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 MLECQ14165 292 aa9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
HERPUD1-208ENST00000563911 NUP153P49790 1475 aaKnown RBP9.65□□□□□ -0.87
HERPUD1-208ENST00000563911 ATAD2Q6PL18 1390 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 A6NJY4 79 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 MEN1O00255 615 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 TAS1R3Q7RTX0 852 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 NLRP3Q96P20 1036 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 ESYT1Q9BSJ8 1104 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 MKNK1Q9BUB5 465 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 ARHGEF40Q8TER5 1519 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 RICTORQ6R327 1708 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 FHOD3Q2V2M9 1422 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
HERPUD1-208ENST00000563911 IGFBP4P22692 258 aa9.63□□□□□ -0.87
HERPUD1-208ENST00000563911 EPHA4P54764 986 aa9.63□□□□□ -0.87
HERPUD1-208ENST00000563911 CLN3Q13286 438 aa9.63□□□□□ -0.87
HERPUD1-208ENST00000563911 FKBP5Q13451 457 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-208ENST00000563911 TLR1Q15399 786 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms