RNA–Protein interactions for RNA: ENST00000563895.1

ULK4P3-201, Transcript of ULK4 pseudogene 3, humanhuman

BASIC

Gene ULK4P3, Length 440 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4P3-201ENST00000563895 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
ULK4P3-201ENST00000563895 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
ULK4P3-201ENST00000563895 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
ULK4P3-201ENST00000563895 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
ULK4P3-201ENST00000563895 COL5A3P25940 1745 aaPredicted RBP11.73□□□□□ -0.53
ULK4P3-201ENST00000563895 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 SMG6Q86US8 1419 aaKnown RBP11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 KDRP35968 1356 aa11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 CNTNAP4Q9C0A0 1308 aa11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 MAP2K2P36507 400 aa11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 FXR1P51114 621 aaKnown RBP eCLIP11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
ULK4P3-201ENST00000563895 C21orf2O43822 256 aa11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 FBLN1P23142 703 aa11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 EPHX2P34913 555 aa11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 HACL1Q9UJ83 578 aa11.71□□□□□ -0.53
ULK4P3-201ENST00000563895 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
ULK4P3-201ENST00000563895 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
ULK4P3-201ENST00000563895 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
ULK4P3-201ENST00000563895 TAOK3Q9H2K8 898 aa11.7□□□□□ -0.54
ULK4P3-201ENST00000563895 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
ULK4P3-201ENST00000563895 EDC4Q6P2E9 1401 aaKnown RBP11.69□□□□□ -0.54
ULK4P3-201ENST00000563895 H0YIN7 160 aa11.68□□□□□ -0.54
ULK4P3-201ENST00000563895 TM4SF1P30408 202 aa11.68□□□□□ -0.54
ULK4P3-201ENST00000563895 BRPF1P55201 1214 aaPredicted RBP11.68□□□□□ -0.54
ULK4P3-201ENST00000563895 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
ULK4P3-201ENST00000563895 CIAPIN1Q6FI81 312 aa11.68□□□□□ -0.54
ULK4P3-201ENST00000563895 ZNF831Q5JPB2 1677 aa11.68□□□□□ -0.54
ULK4P3-201ENST00000563895 RNF123Q5XPI4 1314 aa11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 TLL2Q9Y6L7 1015 aa11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
ULK4P3-201ENST00000563895 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
ULK4P3-201ENST00000563895 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
ULK4P3-201ENST00000563895 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
ULK4P3-201ENST00000563895 SLC17A8Q8NDX2 589 aa11.66□□□□□ -0.54
ULK4P3-201ENST00000563895 TMC1Q8TDI8 760 aa11.66□□□□□ -0.54
ULK4P3-201ENST00000563895 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
ULK4P3-201ENST00000563895 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
ULK4P3-201ENST00000563895 CST9Q5W186 159 aa11.65□□□□□ -0.54
ULK4P3-201ENST00000563895 TRAF5O00463 557 aa11.64□□□□□ -0.55
ULK4P3-201ENST00000563895 ZPR1O75312 459 aa11.64□□□□□ -0.55
ULK4P3-201ENST00000563895 NFIXQ14938 502 aa11.64□□□□□ -0.55
ULK4P3-201ENST00000563895 RRS1Q15050 365 aaKnown RBP11.64□□□□□ -0.55
ULK4P3-201ENST00000563895 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
ULK4P3-201ENST00000563895 COG3Q96JB2 828 aa11.64□□□□□ -0.55
ULK4P3-201ENST00000563895 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
ULK4P3-201ENST00000563895 SERPINB2P05120 415 aa11.63□□□□□ -0.55
ULK4P3-201ENST00000563895 SPG7Q9UQ90 795 aa11.63□□□□□ -0.55
ULK4P3-201ENST00000563895 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
ULK4P3-201ENST00000563895 HPS5Q9UPZ3 1129 aa11.62□□□□□ -0.55
ULK4P3-201ENST00000563895 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
ULK4P3-201ENST00000563895 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
ULK4P3-201ENST00000563895 SAPCD2Q86UD0 394 aa11.61□□□□□ -0.55
ULK4P3-201ENST00000563895 ZIC5Q96T25 663 aa11.61□□□□□ -0.55
ULK4P3-201ENST00000563895 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
ULK4P3-201ENST00000563895 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
ULK4P3-201ENST00000563895 HSP90AB2PQ58FF8 381 aa11.6□□□□□ -0.55
ULK4P3-201ENST00000563895 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
ULK4P3-201ENST00000563895 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
ULK4P3-201ENST00000563895 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
ULK4P3-201ENST00000563895 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
ULK4P3-201ENST00000563895 CELF2O95319 508 aaKnown RBP11.59□□□□□ -0.55
ULK4P3-201ENST00000563895 PHKG2P15735 406 aa11.59□□□□□ -0.55
ULK4P3-201ENST00000563895 RNF216Q9NWF9 866 aaPredicted RBP11.59□□□□□ -0.55
ULK4P3-201ENST00000563895 TERF2IPQ9NYB0 399 aa11.59□□□□□ -0.55
ULK4P3-201ENST00000563895 TJP1Q07157 1748 aa11.58□□□□□ -0.56
ULK4P3-201ENST00000563895 INSRP06213 1382 aa11.58□□□□□ -0.56
ULK4P3-201ENST00000563895 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
ULK4P3-201ENST00000563895 NOGQ13253 232 aa11.58□□□□□ -0.56
ULK4P3-201ENST00000563895 IFNL2Q8IZJ0 200 aa11.58□□□□□ -0.56
ULK4P3-201ENST00000563895 ZNF277Q9NRM2 450 aaPredicted RBP11.58□□□□□ -0.56
ULK4P3-201ENST00000563895 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
ULK4P3-201ENST00000563895 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
ULK4P3-201ENST00000563895 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
ULK4P3-201ENST00000563895 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
ULK4P3-201ENST00000563895 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 PDE6BP35913 854 aa11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 GPC2Q8N158 579 aa11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 HHIPL1Q96JK4 782 aa11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 ZNF408Q9H9D4 720 aa11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 SCN11AQ9UI33 1791 aa11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 PITPNM2Q9BZ72 1349 aa11.56□□□□□ -0.56
ULK4P3-201ENST00000563895 ARFGEF2Q9Y6D5 1785 aa11.55□□□□□ -0.56
ULK4P3-201ENST00000563895 TRPA1O75762 1119 aa11.55□□□□□ -0.56
ULK4P3-201ENST00000563895 CNKSR1Q969H4 720 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms