RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 RTCBQ9Y3I0 505 aaKnown RBP24.74■■□□□ 1.55
SYNGR3-203ENST00000563869 CEMIPQ8WUJ3 1361 aa24.73■■□□□ 1.55
SYNGR3-203ENST00000563869 RNMTO43148 476 aaKnown RBP24.73■■□□□ 1.55
SYNGR3-203ENST00000563869 KDM6AO15550 1401 aaPredicted RBP24.72■■□□□ 1.55
SYNGR3-203ENST00000563869 C10orf71Q711Q0 1435 aa24.72■■□□□ 1.55
SYNGR3-203ENST00000563869 BRCA1P38398 1863 aaKnown RBP24.72■■□□□ 1.55
SYNGR3-203ENST00000563869 C4AP0C0L4 1744 aa24.72■■□□□ 1.55
SYNGR3-203ENST00000563869 APAF1O14727 1248 aa24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 ADRA2BP18089 450 aa24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 RC3H1Q5TC82 1133 aaKnown RBP24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 SLC4A9Q96Q91 983 aa24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 SLC52A2Q9HAB3 445 aa24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 BABAM1Q9NWV8 329 aa24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 BCS1LQ9Y276 419 aa24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 SIPA1L3O60292 1781 aaPredicted RBP24.71■■□□□ 1.55
SYNGR3-203ENST00000563869 A0A0G2JLW4 131 aa24.69■■□□□ 1.54
SYNGR3-203ENST00000563869 TOMM70O94826 608 aa24.69■■□□□ 1.54
SYNGR3-203ENST00000563869 APLP1P51693 650 aa24.69■■□□□ 1.54
SYNGR3-203ENST00000563869 ARHGEF1Q92888 912 aaKnown RBP24.69■■□□□ 1.54
SYNGR3-203ENST00000563869 CCDC87Q9NVE4 849 aa24.69■■□□□ 1.54
SYNGR3-203ENST00000563869 CNTNAP4Q9C0A0 1308 aa24.68■■□□□ 1.54
SYNGR3-203ENST00000563869 RBM42Q9BTD8 480 aaKnown RBP24.68■■□□□ 1.54
SYNGR3-203ENST00000563869 RPS6KA4O75676 772 aa24.67■■□□□ 1.54
SYNGR3-203ENST00000563869 ARFGEF1Q9Y6D6 1849 aa24.66■■□□□ 1.54
SYNGR3-203ENST00000563869 GYS1P13807 737 aa24.66■■□□□ 1.54
SYNGR3-203ENST00000563869 DPEP1P16444 411 aa24.66■■□□□ 1.54
SYNGR3-203ENST00000563869 ARHGAP27Q6ZUM4 889 aa24.66■■□□□ 1.54
SYNGR3-203ENST00000563869 MYH14Q7Z406 1995 aaKnown RBP24.65■■□□□ 1.54
SYNGR3-203ENST00000563869 RFC4P35249 363 aa24.65■■□□□ 1.54
SYNGR3-203ENST00000563869 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
SYNGR3-203ENST00000563869 IL17REQ8NFR9 667 aa24.65■■□□□ 1.54
SYNGR3-203ENST00000563869 PARP3Q9Y6F1 533 aa24.65■■□□□ 1.54
SYNGR3-203ENST00000563869 TAF7Q15545 349 aaPredicted RBP24.64■■□□□ 1.54
SYNGR3-203ENST00000563869 NFATC2IPQ8NCF5 419 aa24.64■■□□□ 1.54
SYNGR3-203ENST00000563869 LGR6Q9HBX8 967 aa24.64■■□□□ 1.54
SYNGR3-203ENST00000563869 TTC5Q8N0Z6 440 aa24.63■■□□□ 1.53
SYNGR3-203ENST00000563869 MCM10Q7L590 875 aa24.62■■□□□ 1.53
SYNGR3-203ENST00000563869 DNAJC5GQ8N7S2 189 aa24.62■■□□□ 1.53
SYNGR3-203ENST00000563869 IL16Q14005 1332 aa24.61■■□□□ 1.53
SYNGR3-203ENST00000563869 WDR63Q8IWG1 891 aa24.61■■□□□ 1.53
SYNGR3-203ENST00000563869 NMRK2Q9NPI5 230 aa24.61■■□□□ 1.53
SYNGR3-203ENST00000563869 RRP7AQ9Y3A4 280 aaKnown RBP24.61■■□□□ 1.53
SYNGR3-203ENST00000563869 BTBD11A6QL63 1104 aa24.6■■□□□ 1.53
SYNGR3-203ENST00000563869 KCNA3P22001 575 aa24.6■■□□□ 1.53
SYNGR3-203ENST00000563869 TRIM35Q9UPQ4 493 aa24.6■■□□□ 1.53
SYNGR3-203ENST00000563869 WDR90Q96KV7 1748 aa24.6■■□□□ 1.53
SYNGR3-203ENST00000563869 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
SYNGR3-203ENST00000563869 GNAI1P63096 354 aa24.59■■□□□ 1.53
SYNGR3-203ENST00000563869 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
SYNGR3-203ENST00000563869 KDM3BQ7LBC6 1761 aa24.58■■□□□ 1.53
SYNGR3-203ENST00000563869 WWC1Q8IX03 1113 aa24.58■■□□□ 1.53
SYNGR3-203ENST00000563869 PIM2Q9P1W9 311 aa24.58■■□□□ 1.53
SYNGR3-203ENST00000563869 C9orf131Q5VYM1 1079 aa24.57■■□□□ 1.52
SYNGR3-203ENST00000563869 RBM46Q8TBY0 533 aaKnown RBP24.57■■□□□ 1.52
SYNGR3-203ENST00000563869 CFAP44Q96MT7 982 aa24.57■■□□□ 1.52
SYNGR3-203ENST00000563869 IFT57Q9NWB7 429 aa24.57■■□□□ 1.52
SYNGR3-203ENST00000563869 TJP1Q07157 1748 aa24.57■■□□□ 1.52
SYNGR3-203ENST00000563869 ZNF790Q6PG37 636 aa24.56■■□□□ 1.52
SYNGR3-203ENST00000563869 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
SYNGR3-203ENST00000563869 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
SYNGR3-203ENST00000563869 CRKLP46109 303 aaKnown RBP24.55■■□□□ 1.52
SYNGR3-203ENST00000563869 DCTN1Q14203 1278 aa24.55■■□□□ 1.52
SYNGR3-203ENST00000563869 TEX13AQ9BXU3 409 aaPredicted RBP24.55■■□□□ 1.52
SYNGR3-203ENST00000563869 USP42Q9H9J4 1324 aaKnown RBP24.54■■□□□ 1.52
SYNGR3-203ENST00000563869 FKBP8Q14318 412 aa24.53■■□□□ 1.52
SYNGR3-203ENST00000563869 DALRD3Q5D0E6 543 aaKnown RBP24.53■■□□□ 1.52
SYNGR3-203ENST00000563869 C16orf71Q8IYS4 520 aaPredicted RBP24.53■■□□□ 1.52
SYNGR3-203ENST00000563869 FMNL2Q96PY5 1086 aa24.53■■□□□ 1.52
SYNGR3-203ENST00000563869 SRP68Q9UHB9 627 aaKnown RBP24.53■■□□□ 1.52
SYNGR3-203ENST00000563869 SBF1O95248 1867 aa24.52■■□□□ 1.52
SYNGR3-203ENST00000563869 DDR1Q08345 913 aa24.52■■□□□ 1.52
SYNGR3-203ENST00000563869 MYH16Q9H6N6 1097 aa24.52■■□□□ 1.52
SYNGR3-203ENST00000563869 TSPYL4Q9UJ04 414 aa24.52■■□□□ 1.52
SYNGR3-203ENST00000563869 SOS1Q07889 1333 aaPredicted RBP24.52■■□□□ 1.52
SYNGR3-203ENST00000563869 CHL1O00533 1208 aa24.51■■□□□ 1.51
SYNGR3-203ENST00000563869 FSTL1Q12841 308 aa24.51■■□□□ 1.51
SYNGR3-203ENST00000563869 KDM2BQ8NHM5 1336 aa24.51■■□□□ 1.51
SYNGR3-203ENST00000563869 KCPQ6ZWJ8 1503 aa24.51■■□□□ 1.51
SYNGR3-203ENST00000563869 TNRC6CQ9HCJ0 1690 aaKnown RBP24.5■■□□□ 1.51
SYNGR3-203ENST00000563869 HNRNPUQ00839 825 aaKnown RBP eCLIP24.49■■□□□ 1.51
SYNGR3-203ENST00000563869 RNF181Q9P0P0 153 aa24.49■■□□□ 1.51
SYNGR3-203ENST00000563869 GOLGA2Q08379 1002 aa24.48■■□□□ 1.51
SYNGR3-203ENST00000563869 THUMPD2Q9BTF0 503 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-203ENST00000563869 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
SYNGR3-203ENST00000563869 ZNF853P0CG23 659 aa24.47■■□□□ 1.51
SYNGR3-203ENST00000563869 TM4SF1P30408 202 aa24.47■■□□□ 1.51
SYNGR3-203ENST00000563869 CHRNA5P30532 468 aa24.47■■□□□ 1.51
SYNGR3-203ENST00000563869 INTS5Q6P9B9 1019 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-203ENST00000563869 KLRG1Q96E93 195 aa24.47■■□□□ 1.51
SYNGR3-203ENST00000563869 HEG1Q9ULI3 1381 aa24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 ZBED9Q6R2W3 1325 aa24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 E9PSI1 815 aa24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 POLRMTO00411 1230 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 HOXB7P09629 217 aa24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 LAS1LQ9Y4W2 734 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 LAMB4A4D0S4 1761 aa24.46■■□□□ 1.51
SYNGR3-203ENST00000563869 STARD3NLO95772 234 aa24.45■■□□□ 1.5
SYNGR3-203ENST00000563869 SNRPA1P09661 255 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-203ENST00000563869 JMYQ8N9B5 988 aa24.45■■□□□ 1.5
SYNGR3-203ENST00000563869 AFDNP55196 1824 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms