RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 PHACTR3Q96KR7 559 aa13.36□□□□□ -0.27
VAC14-204ENST00000563662 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
VAC14-204ENST00000563662 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
VAC14-204ENST00000563662 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
VAC14-204ENST00000563662 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
VAC14-204ENST00000563662 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
VAC14-204ENST00000563662 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.27
VAC14-204ENST00000563662 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
VAC14-204ENST00000563662 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
VAC14-204ENST00000563662 C5P01031 1676 aa13.32□□□□□ -0.28
VAC14-204ENST00000563662 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
VAC14-204ENST00000563662 NARFQ9UHQ1 456 aa13.32□□□□□ -0.28
VAC14-204ENST00000563662 USP42Q9H9J4 1324 aaKnown RBP13.32□□□□□ -0.28
VAC14-204ENST00000563662 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
VAC14-204ENST00000563662 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
VAC14-204ENST00000563662 ITGB4P16144 1822 aa13.31□□□□□ -0.28
VAC14-204ENST00000563662 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
VAC14-204ENST00000563662 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
VAC14-204ENST00000563662 MRC1P22897 1456 aa13.3□□□□□ -0.28
VAC14-204ENST00000563662 SNRPA1P09661 255 aaKnown RBP13.3□□□□□ -0.28
VAC14-204ENST00000563662 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
VAC14-204ENST00000563662 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
VAC14-204ENST00000563662 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
VAC14-204ENST00000563662 TM4SF1P30408 202 aa13.29□□□□□ -0.28
VAC14-204ENST00000563662 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
VAC14-204ENST00000563662 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
VAC14-204ENST00000563662 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
VAC14-204ENST00000563662 MCM10Q7L590 875 aa13.29□□□□□ -0.28
VAC14-204ENST00000563662 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
VAC14-204ENST00000563662 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
VAC14-204ENST00000563662 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
VAC14-204ENST00000563662 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
VAC14-204ENST00000563662 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
VAC14-204ENST00000563662 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
VAC14-204ENST00000563662 UTRNP46939 3433 aa13.28□□□□□ -0.28
VAC14-204ENST00000563662 PLEKHF1Q96S99 279 aa13.27□□□□□ -0.29
VAC14-204ENST00000563662 PIM2Q9P1W9 311 aa13.27□□□□□ -0.29
VAC14-204ENST00000563662 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
VAC14-204ENST00000563662 COL15A1P39059 1388 aa13.26□□□□□ -0.29
VAC14-204ENST00000563662 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
VAC14-204ENST00000563662 PDZRN3Q9UPQ7 1066 aa13.26□□□□□ -0.29
VAC14-204ENST00000563662 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
VAC14-204ENST00000563662 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
VAC14-204ENST00000563662 DPEP1P16444 411 aa13.25□□□□□ -0.29
VAC14-204ENST00000563662 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
VAC14-204ENST00000563662 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
VAC14-204ENST00000563662 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
VAC14-204ENST00000563662 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
VAC14-204ENST00000563662 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
VAC14-204ENST00000563662 RGL2O15211 777 aa13.24□□□□□ -0.29
VAC14-204ENST00000563662 A1BGP04217 495 aa13.24□□□□□ -0.29
VAC14-204ENST00000563662 SERPINB2P05120 415 aa13.24□□□□□ -0.29
VAC14-204ENST00000563662 NFIXQ14938 502 aa13.24□□□□□ -0.29
VAC14-204ENST00000563662 DALRD3Q5D0E6 543 aaKnown RBP13.24□□□□□ -0.29
VAC14-204ENST00000563662 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 KCNQ3O43525 872 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 RIPK4P57078 832 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 DDR1Q08345 913 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 SETDB2Q96T68 719 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 ZNF652Q9Y2D9 606 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
VAC14-204ENST00000563662 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
VAC14-204ENST00000563662 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
VAC14-204ENST00000563662 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
VAC14-204ENST00000563662 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
VAC14-204ENST00000563662 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
VAC14-204ENST00000563662 H0YIN7 160 aa13.21□□□□□ -0.29
VAC14-204ENST00000563662 NPHP1O15259 732 aa13.21□□□□□ -0.29
VAC14-204ENST00000563662 PDE6BP35913 854 aa13.21□□□□□ -0.29
VAC14-204ENST00000563662 PRKRIP1Q9H875 184 aaPredicted RBP13.21□□□□□ -0.29
VAC14-204ENST00000563662 BCL2L12Q9HB09 334 aa13.21□□□□□ -0.29
VAC14-204ENST00000563662 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 KCNA3P22001 575 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 WWC3Q9ULE0 1092 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 ADAMTS7Q9UKP4 1686 aa13.2□□□□□ -0.3
VAC14-204ENST00000563662 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
VAC14-204ENST00000563662 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
VAC14-204ENST00000563662 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
VAC14-204ENST00000563662 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
VAC14-204ENST00000563662 GPBP1L1Q9HC44 474 aaPredicted RBP13.19□□□□□ -0.3
VAC14-204ENST00000563662 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
VAC14-204ENST00000563662 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
VAC14-204ENST00000563662 ST5P78524 1137 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 TPTE2Q6XPS3 522 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 CARMIL3Q8ND23 1372 aa13.18□□□□□ -0.3
VAC14-204ENST00000563662 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
VAC14-204ENST00000563662 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
VAC14-204ENST00000563662 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms