RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 BICDL1Q6ZP65 573 aa9.3□□□□□ -0.92
CDH11-208ENST00000563492 RSPH6AQ9H0K4 717 aa9.3□□□□□ -0.92
CDH11-208ENST00000563492 NMRK2Q9NPI5 230 aa9.3□□□□□ -0.92
CDH11-208ENST00000563492 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
CDH11-208ENST00000563492 NARFQ9UHQ1 456 aa9.3□□□□□ -0.92
CDH11-208ENST00000563492 TJP1Q07157 1748 aa9.3□□□□□ -0.92
CDH11-208ENST00000563492 CEP350Q5VT06 3117 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 MRC1P22897 1456 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 C4AP0C0L4 1744 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 KIAA1551Q9HCM1 1747 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
CDH11-208ENST00000563492 TEFQ10587 303 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 DALRD3Q5D0E6 543 aaKnown RBP9.29□□□□□ -0.92
CDH11-208ENST00000563492 C9orf131Q5VYM1 1079 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 ZNF790Q6PG37 636 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
CDH11-208ENST00000563492 ZNF831Q5JPB2 1677 aa9.29□□□□□ -0.92
CDH11-208ENST00000563492 COL15A1P39059 1388 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 CARMIL3Q8ND23 1372 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 N4BP2Q86UW6 1770 aaPredicted RBP9.28□□□□□ -0.92
CDH11-208ENST00000563492 SERPINB2P05120 415 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 U2AF1L5P0DN76 240 aaPredicted RBP9.28□□□□□ -0.92
CDH11-208ENST00000563492 PRELPP51888 382 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 U2AF1Q01081 240 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDH11-208ENST00000563492 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 MCM10Q7L590 875 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 USP16Q9Y5T5 823 aa9.28□□□□□ -0.92
CDH11-208ENST00000563492 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.92
CDH11-208ENST00000563492 HEG1Q9ULI3 1381 aa9.27□□□□□ -0.93
CDH11-208ENST00000563492 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
CDH11-208ENST00000563492 STARD3NLO95772 234 aa9.27□□□□□ -0.93
CDH11-208ENST00000563492 RASSF7Q02833 373 aa9.27□□□□□ -0.93
CDH11-208ENST00000563492 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
CDH11-208ENST00000563492 HSPA6P17066 643 aa9.26□□□□□ -0.93
CDH11-208ENST00000563492 CFAP53Q96M91 514 aa9.26□□□□□ -0.93
CDH11-208ENST00000563492 MIS18AQ9NYP9 233 aa9.26□□□□□ -0.93
CDH11-208ENST00000563492 RNF181Q9P0P0 153 aa9.26□□□□□ -0.93
CDH11-208ENST00000563492 CEMIPQ8WUJ3 1361 aa9.25□□□□□ -0.93
CDH11-208ENST00000563492 C2CD5Q86YS7 1000 aa9.25□□□□□ -0.93
CDH11-208ENST00000563492 FMNL2Q96PY5 1086 aa9.25□□□□□ -0.93
CDH11-208ENST00000563492 ZNF219Q9P2Y4 722 aaPredicted RBP9.25□□□□□ -0.93
CDH11-208ENST00000563492 KIF13BQ9NQT8 1826 aa9.25□□□□□ -0.93
CDH11-208ENST00000563492 CAMTA2O94983 1202 aa9.24□□□□□ -0.93
CDH11-208ENST00000563492 IL6STP40189 918 aaPredicted RBP9.24□□□□□ -0.93
CDH11-208ENST00000563492 HTRA3P83110 453 aa9.24□□□□□ -0.93
CDH11-208ENST00000563492 PRR5LQ6MZQ0 368 aa9.24□□□□□ -0.93
CDH11-208ENST00000563492 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
CDH11-208ENST00000563492 NUDCQ9Y266 331 aa9.24□□□□□ -0.93
CDH11-208ENST00000563492 A0A087WZG4 1122 aa9.23□□□□□ -0.93
CDH11-208ENST00000563492 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
CDH11-208ENST00000563492 NFKBIEO00221 500 aa9.23□□□□□ -0.93
CDH11-208ENST00000563492 TOMM70O94826 608 aa9.23□□□□□ -0.93
CDH11-208ENST00000563492 NBPF10Q6P3W6 841 aaKnown RBP9.23□□□□□ -0.93
CDH11-208ENST00000563492 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
CDH11-208ENST00000563492 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
CDH11-208ENST00000563492 THUMPD2Q9BTF0 503 aaKnown RBP9.23□□□□□ -0.93
CDH11-208ENST00000563492 TEX13AQ9BXU3 409 aaPredicted RBP9.23□□□□□ -0.93
CDH11-208ENST00000563492 H0YIN7 160 aa9.22□□□□□ -0.93
CDH11-208ENST00000563492 DZIP3Q86Y13 1208 aaKnown RBP9.22□□□□□ -0.93
CDH11-208ENST00000563492 RTF1Q92541 710 aaKnown RBP9.22□□□□□ -0.93
CDH11-208ENST00000563492 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDH11-208ENST00000563492 FAM177BA6PVY3 158 aa9.21□□□□□ -0.94
CDH11-208ENST00000563492 C21orf2O43822 256 aa9.21□□□□□ -0.94
CDH11-208ENST00000563492 SNRPA1P09661 255 aaKnown RBP9.21□□□□□ -0.94
CDH11-208ENST00000563492 SETDB2Q96T68 719 aa9.21□□□□□ -0.94
CDH11-208ENST00000563492 BRIP1Q9BX63 1249 aa9.21□□□□□ -0.94
CDH11-208ENST00000563492 LMNB1P20700 586 aa9.2□□□□□ -0.94
CDH11-208ENST00000563492 TAF7Q15545 349 aaPredicted RBP9.2□□□□□ -0.94
CDH11-208ENST00000563492 HLFQ16534 295 aa9.2□□□□□ -0.94
CDH11-208ENST00000563492 NGEFQ8N5V2 710 aa9.2□□□□□ -0.94
CDH11-208ENST00000563492 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
CDH11-208ENST00000563492 PLEKHF1Q96S99 279 aa9.2□□□□□ -0.94
CDH11-208ENST00000563492 UBR2Q8IWV8 1755 aa9.19□□□□□ -0.94
CDH11-208ENST00000563492 PDE6BP35913 854 aa9.19□□□□□ -0.94
CDH11-208ENST00000563492 OLFM4Q6UX06 510 aa9.19□□□□□ -0.94
CDH11-208ENST00000563492 CNBD1Q8NA66 436 aa9.19□□□□□ -0.94
CDH11-208ENST00000563492 BRCA1P38398 1863 aaKnown RBP9.19□□□□□ -0.94
CDH11-208ENST00000563492 POTECB2RU33 542 aa9.18□□□□□ -0.94
CDH11-208ENST00000563492 NPHP1O15259 732 aa9.18□□□□□ -0.94
CDH11-208ENST00000563492 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
CDH11-208ENST00000563492 SRGNP10124 158 aa9.18□□□□□ -0.94
CDH11-208ENST00000563492 APLP1P51693 650 aa9.18□□□□□ -0.94
CDH11-208ENST00000563492 AFDNP55196 1824 aaKnown RBP9.18□□□□□ -0.94
CDH11-208ENST00000563492 NPM2Q86SE8 214 aaKnown RBP9.18□□□□□ -0.94
CDH11-208ENST00000563492 SLC51AQ86UW1 340 aa9.18□□□□□ -0.94
CDH11-208ENST00000563492 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
CDH11-208ENST00000563492 C16orf71Q8IYS4 520 aaPredicted RBP9.18□□□□□ -0.94
CDH11-208ENST00000563492 KDM2BQ8NHM5 1336 aa9.18□□□□□ -0.94
CDH11-208ENST00000563492 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
CDH11-208ENST00000563492 NRXN2Q9P2S2 1712 aa9.17□□□□□ -0.94
CDH11-208ENST00000563492 GLTPD2A6NH11 291 aa9.17□□□□□ -0.94
CDH11-208ENST00000563492 EIF4A1P60842 406 aaKnown RBP9.17□□□□□ -0.94
CDH11-208ENST00000563492 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
CDH11-208ENST00000563492 PRPF40BQ6NWY9 871 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms