RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NBPF1Q3BBV0 1214 aa7.29□□□□□ -1.24
HMGB1P33-201ENST00000563485 SLC9A9Q8IVB4 645 aa7.29□□□□□ -1.24
HMGB1P33-201ENST00000563485 C1orf216Q8TAB5 229 aa7.29□□□□□ -1.24
HMGB1P33-201ENST00000563485 CALR3Q96L12 384 aaKnown RBP7.29□□□□□ -1.24
HMGB1P33-201ENST00000563485 NDFIP2Q9NV92 336 aa7.29□□□□□ -1.24
HMGB1P33-201ENST00000563485 PHF24Q9UPV7 400 aa7.29□□□□□ -1.24
HMGB1P33-201ENST00000563485 PALM3A6NDB9 673 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 BNIP3LO60238 219 aa7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 TXLNAP40222 546 aa7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 LARGE2Q8N3Y3 721 aa7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 ZNF594Q96JF6 807 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 ZCCHC2Q9C0B9 1178 aaKnown RBP7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 ATXN7L1Q9ULK2 861 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 NSFL1CQ9UNZ2 370 aaKnown RBP7.28□□□□□ -1.24
HMGB1P33-201ENST00000563485 A0A1W2PNR3 127 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 DKK1O94907 266 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 TATP17735 454 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 MAP2K3P46734 347 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 GSK3AP49840 483 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 KCNMA1Q12791 1236 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 ARSJQ5FYB0 599 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 SIX5Q8N196 739 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 ZIC5Q96T25 663 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 PPP1R12CQ9BZL4 782 aa7.27□□□□□ -1.25
HMGB1P33-201ENST00000563485 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 BCRP11274 1271 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 FGFR3P22607 806 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 TEAD4Q15561 434 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 SH3PXD2AQ5TCZ1 1133 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 FIGNL1Q6PIW4 674 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 NLRP8Q86W28 1048 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 L3MBTL2Q969R5 705 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 KLRG1Q96E93 195 aa7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 TSPAN10Q9H1Z9 355 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P33-201ENST00000563485 DCDC2BA2VCK2 349 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 C2CD2LO14523 706 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 ATXN7O15265 892 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 RASA1P20936 1047 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 NOS2P35228 1153 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 MARSP56192 900 aaKnown RBP7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 CTBSQ01459 385 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 TSEN2Q8NCE0 465 aaKnown RBP7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 HCN2Q9UL51 889 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 ZNF232Q9UNY5 417 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 PCDHGC4Q9Y5F7 938 aa7.25□□□□□ -1.25
HMGB1P33-201ENST00000563485 M0R2N6 131 aa7.24□□□□□ -1.25
HMGB1P33-201ENST00000563485 BMP4P12644 408 aa7.24□□□□□ -1.25
HMGB1P33-201ENST00000563485 BICDL1Q6ZP65 573 aa7.24□□□□□ -1.25
HMGB1P33-201ENST00000563485 ENAMQ9NRM1 1142 aa7.24□□□□□ -1.25
HMGB1P33-201ENST00000563485 ZNF777Q9ULD5 760 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P33-201ENST00000563485 SERTM1A2A2V5 107 aa7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 RNF225M0QZC1 329 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 EML1O00423 815 aa7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 KHNYNO15037 678 aaKnown RBP7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 OIP5O43482 229 aa7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 LMOD1P29536 600 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 CRTC2Q53ET0 693 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 KANK4Q5T7N3 995 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 NEDD1Q8NHV4 660 aa7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 RBM19Q9Y4C8 960 aaKnown RBP7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
HMGB1P33-201ENST00000563485 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 CD33P20138 364 aa7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 PSMA6P60900 246 aaKnown RBP7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 RASSF7Q02833 373 aa7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 TNP2Q05952 138 aa7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 LARP1Q6PKG0 1096 aaKnown RBP7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 C1orf229Q6ZS94 237 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P33-201ENST00000563485 SHISA8B8ZZ34 492 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 IRS1P35568 1242 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 SEC13P55735 322 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 PTK7Q13308 1070 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 CFAP70Q5T0N1 1121 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 C7orf43Q8WVR3 580 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 SCARF2Q96GP6 870 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 LRRC4BQ9NT99 713 aa7.21□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L15C9J2P7 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L10C9JJH3 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L13C9JLJ4 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L12C9JPN9 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L11C9JVI0 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L21D6R901 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L18D6R9N7 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L22D6RA61 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L17D6RBQ6 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L19D6RCP7 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L20D6RJB6 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 C21orf2O43822 256 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 PPP1R12BO60237 982 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 LGR5O75473 907 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 USP17L24Q0WX57 530 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 DPYDQ12882 1025 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 SAMD5Q5TGI4 173 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 LRRC69Q6ZNQ3 347 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 GALNT6Q8NCL4 622 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 RHPN1Q8TCX5 695 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms