RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 MCM10Q7L590 875 aa16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 PARP3Q9Y6F1 533 aa16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
NSMCE1-204ENST00000563273 A0A087WZG4 1122 aa16.19■□□□□ 0.18
NSMCE1-204ENST00000563273 YBX3P16989 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
NSMCE1-204ENST00000563273 FKBP8Q14318 412 aa16.19■□□□□ 0.18
NSMCE1-204ENST00000563273 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
NSMCE1-204ENST00000563273 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
NSMCE1-204ENST00000563273 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
NSMCE1-204ENST00000563273 TM4SF1P30408 202 aa16.18■□□□□ 0.18
NSMCE1-204ENST00000563273 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
NSMCE1-204ENST00000563273 PNISRQ8TF01 805 aaKnown RBP16.18■□□□□ 0.18
NSMCE1-204ENST00000563273 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
NSMCE1-204ENST00000563273 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
NSMCE1-204ENST00000563273 KCNQ3O43525 872 aa16.17■□□□□ 0.18
NSMCE1-204ENST00000563273 SNRPA1P09661 255 aaKnown RBP16.17■□□□□ 0.18
NSMCE1-204ENST00000563273 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
NSMCE1-204ENST00000563273 PRKRIP1Q9H875 184 aaPredicted RBP16.17■□□□□ 0.18
NSMCE1-204ENST00000563273 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
NSMCE1-204ENST00000563273 DCTN1Q14203 1278 aa16.16■□□□□ 0.18
NSMCE1-204ENST00000563273 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
NSMCE1-204ENST00000563273 POLRMTO00411 1230 aaKnown RBP16.15■□□□□ 0.18
NSMCE1-204ENST00000563273 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
NSMCE1-204ENST00000563273 DDR1Q08345 913 aa16.15■□□□□ 0.18
NSMCE1-204ENST00000563273 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
NSMCE1-204ENST00000563273 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
NSMCE1-204ENST00000563273 RGL2O15211 777 aa16.13■□□□□ 0.17
NSMCE1-204ENST00000563273 LMOD3Q0VAK6 560 aa16.13■□□□□ 0.17
NSMCE1-204ENST00000563273 BABAM1Q9NWV8 329 aa16.13■□□□□ 0.17
NSMCE1-204ENST00000563273 A1BGP04217 495 aa16.12■□□□□ 0.17
NSMCE1-204ENST00000563273 NFIXQ14938 502 aa16.12■□□□□ 0.17
NSMCE1-204ENST00000563273 NPM2Q86SE8 214 aaKnown RBP16.12■□□□□ 0.17
NSMCE1-204ENST00000563273 ZNF784Q8NCA9 323 aaPredicted RBP16.12■□□□□ 0.17
NSMCE1-204ENST00000563273 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
NSMCE1-204ENST00000563273 TMPOP42166 694 aaKnown RBP16.11■□□□□ 0.17
NSMCE1-204ENST00000563273 KCNA3P22001 575 aa16.1■□□□□ 0.17
NSMCE1-204ENST00000563273 RIPK4P57078 832 aa16.1■□□□□ 0.17
NSMCE1-204ENST00000563273 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
NSMCE1-204ENST00000563273 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
NSMCE1-204ENST00000563273 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
NSMCE1-204ENST00000563273 DPEP1P16444 411 aa16.09■□□□□ 0.17
NSMCE1-204ENST00000563273 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
NSMCE1-204ENST00000563273 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
NSMCE1-204ENST00000563273 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
NSMCE1-204ENST00000563273 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.17
NSMCE1-204ENST00000563273 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
NSMCE1-204ENST00000563273 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
NSMCE1-204ENST00000563273 SERPINB2P05120 415 aa16.08■□□□□ 0.16
NSMCE1-204ENST00000563273 THUMPD2Q9BTF0 503 aaKnown RBP16.08■□□□□ 0.16
NSMCE1-204ENST00000563273 MIS18AQ9NYP9 233 aa16.08■□□□□ 0.16
NSMCE1-204ENST00000563273 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
NSMCE1-204ENST00000563273 CHD4Q14839 1912 aa16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 ADAMTS8Q9UP79 889 aa16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 NRXN2Q9P2S2 1712 aa16.07■□□□□ 0.16
NSMCE1-204ENST00000563273 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 NBPF10Q6P3W6 841 aaKnown RBP16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 NBPF15Q8N660 670 aa16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
NSMCE1-204ENST00000563273 ADCY9O60503 1353 aa16.05■□□□□ 0.16
NSMCE1-204ENST00000563273 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
NSMCE1-204ENST00000563273 ZNF652Q9Y2D9 606 aa16.05■□□□□ 0.16
NSMCE1-204ENST00000563273 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
NSMCE1-204ENST00000563273 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
NSMCE1-204ENST00000563273 ZNF316A6NFI3 1004 aaPredicted RBP16.04■□□□□ 0.16
NSMCE1-204ENST00000563273 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-204ENST00000563273 SETDB2Q96T68 719 aa16.04■□□□□ 0.16
NSMCE1-204ENST00000563273 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
NSMCE1-204ENST00000563273 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
NSMCE1-204ENST00000563273 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
NSMCE1-204ENST00000563273 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 CHL1O00533 1208 aa16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 CHRNA5P30532 468 aa16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 WWC3Q9ULE0 1092 aa16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 TRIM35Q9UPQ4 493 aa16.02■□□□□ 0.16
NSMCE1-204ENST00000563273 PDE6BP35913 854 aa16.01■□□□□ 0.15
NSMCE1-204ENST00000563273 PRR5LQ6MZQ0 368 aa16.01■□□□□ 0.15
NSMCE1-204ENST00000563273 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
NSMCE1-204ENST00000563273 H0YIN7 160 aa16■□□□□ 0.15
NSMCE1-204ENST00000563273 CNBD1Q8NA66 436 aa16■□□□□ 0.15
NSMCE1-204ENST00000563273 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
NSMCE1-204ENST00000563273 ATP10DQ9P241 1426 aa16■□□□□ 0.15
NSMCE1-204ENST00000563273 BCORQ6W2J9 1755 aa16■□□□□ 0.15
NSMCE1-204ENST00000563273 N4BP2Q86UW6 1770 aaPredicted RBP16■□□□□ 0.15
NSMCE1-204ENST00000563273 BRCA1P38398 1863 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-204ENST00000563273 NEUROD2Q15784 382 aa15.99■□□□□ 0.15
NSMCE1-204ENST00000563273 TTLL6Q8N841 843 aa15.99■□□□□ 0.15
NSMCE1-204ENST00000563273 HOXB7P09629 217 aa15.98■□□□□ 0.15
NSMCE1-204ENST00000563273 ST5P78524 1137 aa15.98■□□□□ 0.15
NSMCE1-204ENST00000563273 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
NSMCE1-204ENST00000563273 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms