RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 KCNQ3O43525 872 aa20.89■□□□□ 0.93
USB1-208ENST00000563207 ZNF496Q96IT1 587 aaPredicted RBP20.89■□□□□ 0.93
USB1-208ENST00000563207 BCS1LQ9Y276 419 aa20.89■□□□□ 0.93
USB1-208ENST00000563207 ADCY9O60503 1353 aa20.88■□□□□ 0.93
USB1-208ENST00000563207 ANP32CO43423 234 aa20.88■□□□□ 0.93
USB1-208ENST00000563207 CANXP27824 592 aaKnown RBP20.88■□□□□ 0.93
USB1-208ENST00000563207 TM4SF1P30408 202 aa20.88■□□□□ 0.93
USB1-208ENST00000563207 TGFB2P61812 414 aa20.88■□□□□ 0.93
USB1-208ENST00000563207 BCL2L12Q9HB09 334 aa20.88■□□□□ 0.93
USB1-208ENST00000563207 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
USB1-208ENST00000563207 AFDNP55196 1824 aaKnown RBP20.86■□□□□ 0.93
USB1-208ENST00000563207 POLRMTO00411 1230 aaKnown RBP20.86■□□□□ 0.93
USB1-208ENST00000563207 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
USB1-208ENST00000563207 COL15A1P39059 1388 aa20.85■□□□□ 0.93
USB1-208ENST00000563207 CHRNA5P30532 468 aa20.85■□□□□ 0.93
USB1-208ENST00000563207 TEFQ10587 303 aa20.85■□□□□ 0.93
USB1-208ENST00000563207 ZNF790Q6PG37 636 aa20.85■□□□□ 0.93
USB1-208ENST00000563207 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 ZPR1O75312 459 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
USB1-208ENST00000563207 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
USB1-208ENST00000563207 NFIXQ14938 502 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 NARFQ9UHQ1 456 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 NUDCQ9Y266 331 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
USB1-208ENST00000563207 FCHSD2O94868 740 aa20.83■□□□□ 0.93
USB1-208ENST00000563207 DCTN1Q14203 1278 aa20.83■□□□□ 0.93
USB1-208ENST00000563207 TTC5Q8N0Z6 440 aa20.83■□□□□ 0.93
USB1-208ENST00000563207 HEG1Q9ULI3 1381 aa20.83■□□□□ 0.92
USB1-208ENST00000563207 ARHGAP27Q6ZUM4 889 aa20.82■□□□□ 0.92
USB1-208ENST00000563207 MCM10Q7L590 875 aa20.82■□□□□ 0.92
USB1-208ENST00000563207 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
USB1-208ENST00000563207 EIF5P55010 431 aaKnown RBP20.81■□□□□ 0.92
USB1-208ENST00000563207 GPBP1L1Q9HC44 474 aaPredicted RBP20.81■□□□□ 0.92
USB1-208ENST00000563207 A1BGP04217 495 aa20.8■□□□□ 0.92
USB1-208ENST00000563207 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
USB1-208ENST00000563207 ARFGEF1Q9Y6D6 1849 aa20.8■□□□□ 0.92
USB1-208ENST00000563207 NRXN2Q9P2S2 1712 aa20.79■□□□□ 0.92
USB1-208ENST00000563207 BTBD11A6QL63 1104 aa20.79■□□□□ 0.92
USB1-208ENST00000563207 BICDL1Q6ZP65 573 aa20.79■□□□□ 0.92
USB1-208ENST00000563207 ZNF330Q9Y3S2 320 aaPredicted RBP20.79■□□□□ 0.92
USB1-208ENST00000563207 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
USB1-208ENST00000563207 TBC1D2BQ9UPU7 963 aa20.78■□□□□ 0.92
USB1-208ENST00000563207 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
USB1-208ENST00000563207 STARD3NLO95772 234 aa20.77■□□□□ 0.92
USB1-208ENST00000563207 SERPINB2P05120 415 aa20.77■□□□□ 0.92
USB1-208ENST00000563207 CCDC24Q8N4L8 307 aa20.77■□□□□ 0.92
USB1-208ENST00000563207 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
USB1-208ENST00000563207 TBC1D9BQ66K14 1250 aa20.76■□□□□ 0.91
USB1-208ENST00000563207 FMNL2Q96PY5 1086 aa20.76■□□□□ 0.91
USB1-208ENST00000563207 DLG5Q8TDM6 1919 aa20.76■□□□□ 0.91
USB1-208ENST00000563207 CEP350Q5VT06 3117 aa20.76■□□□□ 0.91
USB1-208ENST00000563207 DALRD3Q5D0E6 543 aaKnown RBP20.75■□□□□ 0.91
USB1-208ENST00000563207 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
USB1-208ENST00000563207 SCN7AQ01118 1682 aa20.74■□□□□ 0.91
USB1-208ENST00000563207 ANKRD31Q8N7Z5 1873 aa20.74■□□□□ 0.91
USB1-208ENST00000563207 KIF3CO14782 793 aa20.73■□□□□ 0.91
USB1-208ENST00000563207 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
USB1-208ENST00000563207 C9orf131Q5VYM1 1079 aa20.72■□□□□ 0.91
USB1-208ENST00000563207 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
USB1-208ENST00000563207 PNNQ9H307 717 aaKnown RBP20.72■□□□□ 0.91
USB1-208ENST00000563207 DLEC1Q9Y238 1755 aa20.72■□□□□ 0.91
USB1-208ENST00000563207 SBF1O95248 1867 aa20.71■□□□□ 0.91
USB1-208ENST00000563207 IL6STP40189 918 aaPredicted RBP20.71■□□□□ 0.91
USB1-208ENST00000563207 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
USB1-208ENST00000563207 CAMTA2O94983 1202 aa20.7■□□□□ 0.9
USB1-208ENST00000563207 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
USB1-208ENST00000563207 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
USB1-208ENST00000563207 A0A087WZG4 1122 aa20.69■□□□□ 0.9
USB1-208ENST00000563207 PRELPP51888 382 aa20.69■□□□□ 0.9
USB1-208ENST00000563207 RASSF7Q02833 373 aa20.69■□□□□ 0.9
USB1-208ENST00000563207 C2CD5Q86YS7 1000 aa20.69■□□□□ 0.9
USB1-208ENST00000563207 NMRK2Q9NPI5 230 aa20.69■□□□□ 0.9
USB1-208ENST00000563207 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
USB1-208ENST00000563207 COL11A2P13942 1736 aaPredicted RBP20.68■□□□□ 0.9
USB1-208ENST00000563207 NBPF26B4DH59 902 aa20.68■□□□□ 0.9
USB1-208ENST00000563207 NBPF10Q6P3W6 841 aaKnown RBP20.68■□□□□ 0.9
USB1-208ENST00000563207 NBPF15Q8N660 670 aa20.68■□□□□ 0.9
USB1-208ENST00000563207 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
USB1-208ENST00000563207 NEFMP07197 916 aa20.66■□□□□ 0.9
USB1-208ENST00000563207 SNRPA1P09661 255 aaKnown RBP20.66■□□□□ 0.9
USB1-208ENST00000563207 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
USB1-208ENST00000563207 DZIP3Q86Y13 1208 aaKnown RBP20.66■□□□□ 0.9
USB1-208ENST00000563207 RNF181Q9P0P0 153 aa20.66■□□□□ 0.9
USB1-208ENST00000563207 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
USB1-208ENST00000563207 TAF7Q15545 349 aaPredicted RBP20.65■□□□□ 0.9
USB1-208ENST00000563207 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.9
USB1-208ENST00000563207 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.9
USB1-208ENST00000563207 MRS2Q9HD23 443 aa20.64■□□□□ 0.89
USB1-208ENST00000563207 ZNF219Q9P2Y4 722 aaPredicted RBP20.64■□□□□ 0.89
USB1-208ENST00000563207 H0YIN7 160 aa20.63■□□□□ 0.89
USB1-208ENST00000563207 CACNA1SQ13698 1873 aa20.62■□□□□ 0.89
USB1-208ENST00000563207 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
USB1-208ENST00000563207 TTLL6Q8N841 843 aa20.62■□□□□ 0.89
USB1-208ENST00000563207 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
USB1-208ENST00000563207 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
USB1-208ENST00000563207 ZNF622Q969S3 477 aaKnown RBP eCLIP20.61■□□□□ 0.89
USB1-208ENST00000563207 BRIP1Q9BX63 1249 aa20.61■□□□□ 0.89
USB1-208ENST00000563207 LAMB4A4D0S4 1761 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms