RNA–Protein interactions for RNA: ENST00000563147.5

TUBGCP4-204, Transcript of tubulin gamma complex associated protein 4, human

TSL 5

Gene TUBGCP4, Length 846 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBGCP4-204	ENST00000563147	HSP90AB2P	Q58FF8	381 aa		13.92	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	EMILIN3	Q9NT22	766 aa		13.92	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	KNSTRN	Q9Y448	316 aa		13.92	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	CD2AP	Q9Y5K6	639 aa		13.92	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	HMGB2	P26583	209 aa	Known RBP	13.91	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	PDIA6	Q15084	440 aa		13.91	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	DDX54	Q8TDD1	881 aa	Known RBP	13.91	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	CD44	P16070	742 aa	Known RBP	13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	PRIM1	P49642	420 aa	Known RBP	13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	KCNQ4	P56696	695 aa		13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	NBPF6	Q5VWK0	638 aa		13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	COL23A1	Q86Y22	540 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	SYTL4	Q96C24	671 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	NBPF4	Q96M43	638 aa		13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	RSPH6A	Q9H0K4	717 aa		13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	CCNL1	Q9UK58	526 aa	Predicted RBP	13.9	□□□□□ -0.18
TUBGCP4-204	ENST00000563147	PIP4P2	Q8N4L2	257 aa		13.89	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	ZNF526	Q8TF50	670 aa	Predicted RBP	13.89	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	TRPC6	Q9Y210	931 aa		13.89	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	DOT1L	Q8TEK3	1739 aa		13.89	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	FLAD1	Q8NFF5	587 aa		13.88	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	LTV1	Q96GA3	475 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	PKD1L3	Q7Z443	1732 aa		13.87	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	APLP1	P51693	650 aa		13.87	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	MEGF6	O75095	1541 aa		13.86	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	GPR37	O15354	613 aa		13.86	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	MSL1	Q68DK7	614 aa		13.86	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	MORC1	Q86VD1	984 aa		13.86	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	KIF3C	O14782	793 aa		13.85	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	ZEB1	P37275	1124 aa	Predicted RBP	13.85	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	TNNT2	P45379	298 aa	Predicted RBP	13.85	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	DSG2	Q14126	1118 aa		13.85	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	ZCRB1	Q8TBF4	217 aa	Known RBP	13.84	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	MS4A3	Q96HJ5	214 aa		13.84	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	EYA1	Q99502	592 aa		13.84	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
TUBGCP4-204	ENST00000563147	C5	P01031	1676 aa		13.83	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	EIF4A2	Q14240	407 aa	Known RBP	13.83	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	FAM117A	Q9C073	453 aa		13.83	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	ITGB4	P16144	1822 aa		13.83	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	PPM1G	O15355	546 aa	Predicted RBP	13.82	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	CC2D1B	Q5T0F9	858 aa	Known RBP	13.82	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	USHBP1	Q8N6Y0	703 aa		13.82	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	TAF1L	Q8IZX4	1826 aa		13.82	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	IGSF1	Q8N6C5	1336 aa		13.82	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	VIRMA	Q69YN4	1812 aa	Known RBP	13.81	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	CHRDL2	Q6WN34	429 aa		13.81	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	DNAJC5G	Q8N7S2	189 aa		13.81	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	PLEKHG2	Q9H7P9	1386 aa		13.81	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.8	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	TOMM70	O94826	608 aa		13.8	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	COL3A1	P02461	1466 aa	Predicted RBP	13.8	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	IL13	P35225	146 aa		13.79	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	MTHFS	P49914	203 aa		13.79	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	CIC	Q96RK0	1608 aa	Predicted RBP	13.79	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	TOGARAM1	Q9Y4F4	1720 aa		13.78	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	TIE1	P35590	1138 aa		13.78	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	FOXK1	P85037	733 aa		13.78	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	RAPGEF4	Q8WZA2	1011 aa		13.78	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	KDR	P35968	1356 aa		13.78	□□□□□ -0.2
TUBGCP4-204	ENST00000563147	TAT	P17735	454 aa	Predicted RBP	13.77	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	TMC2	Q8TDI7	906 aa		13.77	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PALLD	Q8WX93	1383 aa		13.77	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	UBR3	Q6ZT12	1888 aa		13.76	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	C4B	P0C0L5	1744 aa		13.76	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	DDRGK1	Q96HY6	314 aa		13.76	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PODXL2	Q9NZ53	605 aa		13.76	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	TTLL13P	A6NNM8	815 aa		13.75	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	CYP27B1	O15528	508 aa		13.75	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	MAP2K5	Q13163	448 aa		13.75	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	SMARCC1	Q92922	1105 aa	Predicted RBP	13.75	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	WWC3	Q9ULE0	1092 aa		13.75	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	WDR90	Q96KV7	1748 aa		13.75	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	CCDC102A	Q96A19	550 aa		13.74	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	SCN11A	Q9UI33	1791 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PCDH11X	Q9BZA7	1347 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PCDH11Y	Q9BZA8	1340 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	GRXCR2	A6NFK2	248 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	IRF6	O14896	467 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	SSFA2	P28290	1259 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PPP2R1A	P30153	589 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	DPY19L2	Q6NUT2	758 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	MICALL2	Q8IY33	904 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	RBM46	Q8TBY0	533 aa	Known RBP	13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	KLRG1	Q96E93	195 aa		13.73	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PHF14	O94880	888 aa		13.72	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	AMHR2	Q16671	573 aa		13.72	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.72	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	MPRIP	Q6WCQ1	1025 aa		13.72	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	AEBP1	Q8IUX7	1158 aa		13.72	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	JMY	Q8N9B5	988 aa		13.72	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	KIF13B	Q9NQT8	1826 aa		13.71	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	DIAPH1	O60610	1272 aa	Known RBP	13.71	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	DDX10	Q13206	875 aa	Known RBP	13.71	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	AMIGO3	Q86WK7	504 aa		13.71	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	PLPP6	Q8IY26	295 aa		13.71	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	SPG7	Q9UQ90	795 aa		13.71	□□□□□ -0.21
TUBGCP4-204	ENST00000563147	ADAMTS7	Q9UKP4	1686 aa		13.7	□□□□□ -0.22
TUBGCP4-204	ENST00000563147	TGFB2	P61812	414 aa		13.7	□□□□□ -0.22

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