RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CABP5Q9NP86 173 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
RPAP1-204ENST00000562303 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.32
RPAP1-204ENST00000562303 GOLGA8AA7E2F4 631 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
RPAP1-204ENST00000562303 CTNNA2P26232 953 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 GUCY1B3Q02153 619 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
RPAP1-204ENST00000562303 HOOK3Q86VS8 718 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 CFTRP13569 1480 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 GRPEL1Q9HAV7 217 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 DNA2P51530 1060 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPAP1-204ENST00000562303 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
RPAP1-204ENST00000562303 STAMBPO95630 424 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 HMGB1P09429 215 aaKnown RBP13.04□□□□□ -0.32
RPAP1-204ENST00000562303 DDX46Q7L014 1031 aaKnown RBP13.04□□□□□ -0.32
RPAP1-204ENST00000562303 LUZP1Q86V48 1076 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 A0A087WZG4 1122 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 FOXO3O43524 673 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 LDHCP07864 332 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 TNNT1P13805 278 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 CA8P35219 290 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 CETN1Q12798 172 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
RPAP1-204ENST00000562303 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
RPAP1-204ENST00000562303 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 SAMM50Q9Y512 469 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 UBXN4Q92575 508 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
RPAP1-204ENST00000562303 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
RPAP1-204ENST00000562303 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
RPAP1-204ENST00000562303 PSMD1Q99460 953 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 KIF21BO75037 1637 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 MYO1BO43795 1136 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 USP8P40818 1118 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
RPAP1-204ENST00000562303 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
RPAP1-204ENST00000562303 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
RPAP1-204ENST00000562303 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 KIF5CO60282 957 aa13.03□□□□□ -0.32
RPAP1-204ENST00000562303 GOLGA6L10A0A0M3HER8 536 aa13.02□□□□□ -0.32
RPAP1-204ENST00000562303 BAG3O95817 575 aa13.02□□□□□ -0.32
RPAP1-204ENST00000562303 CALML4Q96GE6 196 aa13.02□□□□□ -0.32
RPAP1-204ENST00000562303 AKNAQ7Z591 1439 aa13.02□□□□□ -0.32
RPAP1-204ENST00000562303 RFC4P35249 363 aa13.02□□□□□ -0.32
RPAP1-204ENST00000562303 IFFO1Q0D2I5 559 aa13.02□□□□□ -0.32
RPAP1-204ENST00000562303 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
RPAP1-204ENST00000562303 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
RPAP1-204ENST00000562303 GBP3Q9H0R5 595 aa13.02□□□□□ -0.33
RPAP1-204ENST00000562303 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
RPAP1-204ENST00000562303 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 USO1O60763 962 aaKnown RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 KAT14Q9H8E8 782 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 SYCE3A1L190 88 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 CASQ1P31415 396 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 KIF5BP33176 963 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 NME9Q86XW9 330 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 TSPY2A6NKD2 308 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 F6X3S4 739 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 PDE4BQ07343 736 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 GRM1Q13255 1194 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 STXBP4Q6ZWJ1 553 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 SCAND2PQ9GZW5 306 aaPredicted RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 MTIF2P46199 727 aaKnown RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 ST5P78524 1137 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 TTF1Q15361 905 aaPredicted RBP13.01□□□□□ -0.33
RPAP1-204ENST00000562303 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
RPAP1-204ENST00000562303 UQCRHLA0A096LP55 91 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 UQCRHP07919 91 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
RPAP1-204ENST00000562303 IDEP14735 1019 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
RPAP1-204ENST00000562303 DBF4Q9UBU7 674 aaPredicted RBP13□□□□□ -0.33
RPAP1-204ENST00000562303 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 AMPD3Q01432 767 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 CCT2P78371 535 aaKnown RBP13□□□□□ -0.33
RPAP1-204ENST00000562303 UBE4AQ14139 1066 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 CPLX3Q8WVH0 158 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 PRC1O43663 620 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms