RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 DDR1Q08345 913 aa12.57□□□□□ -0.4
NSMCE1-203ENST00000562039 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
NSMCE1-203ENST00000562039 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
NSMCE1-203ENST00000562039 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-203ENST00000562039 UTRNP46939 3433 aa12.57□□□□□ -0.4
NSMCE1-203ENST00000562039 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
NSMCE1-203ENST00000562039 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 SIPA1L3O60292 1781 aaPredicted RBP12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 ZPR1O75312 459 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 COL15A1P39059 1388 aa12.56□□□□□ -0.4
NSMCE1-203ENST00000562039 STARD3NLO95772 234 aa12.55□□□□□ -0.4
NSMCE1-203ENST00000562039 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
NSMCE1-203ENST00000562039 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
NSMCE1-203ENST00000562039 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
NSMCE1-203ENST00000562039 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
NSMCE1-203ENST00000562039 DLG5Q8TDM6 1919 aa12.54□□□□□ -0.4
NSMCE1-203ENST00000562039 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
NSMCE1-203ENST00000562039 DPEP1P16444 411 aa12.54□□□□□ -0.4
NSMCE1-203ENST00000562039 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
NSMCE1-203ENST00000562039 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
NSMCE1-203ENST00000562039 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
NSMCE1-203ENST00000562039 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
NSMCE1-203ENST00000562039 NFIXQ14938 502 aa12.53□□□□□ -0.4
NSMCE1-203ENST00000562039 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
NSMCE1-203ENST00000562039 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
NSMCE1-203ENST00000562039 GOLGB1Q14789 3259 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 POLRMTO00411 1230 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 CHRNA5P30532 468 aa12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 RIPK4P57078 832 aa12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 PRKRIP1Q9H875 184 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 PXDNLA1KZ92 1463 aa12.52□□□□□ -0.41
NSMCE1-203ENST00000562039 CHD4Q14839 1912 aa12.51□□□□□ -0.41
NSMCE1-203ENST00000562039 HTATSF1O43719 755 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-203ENST00000562039 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
NSMCE1-203ENST00000562039 TM4SF1P30408 202 aa12.51□□□□□ -0.41
NSMCE1-203ENST00000562039 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-203ENST00000562039 C10orf71Q711Q0 1435 aa12.51□□□□□ -0.41
NSMCE1-203ENST00000562039 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 TBC1D9BQ66K14 1250 aa12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 PNNQ9H307 717 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
NSMCE1-203ENST00000562039 SERPINB2P05120 415 aa12.49□□□□□ -0.41
NSMCE1-203ENST00000562039 IL6STP40189 918 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-203ENST00000562039 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-203ENST00000562039 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-203ENST00000562039 ZNF526Q8TF50 670 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-203ENST00000562039 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-203ENST00000562039 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 A0A087WZG4 1122 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
NSMCE1-203ENST00000562039 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 KCNA3P22001 575 aa12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 EIF4A1P60842 406 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 TGFB2P61812 414 aa12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
NSMCE1-203ENST00000562039 NPHP1O15259 732 aa12.46□□□□□ -0.41
NSMCE1-203ENST00000562039 MYL6BP14649 208 aa12.46□□□□□ -0.41
NSMCE1-203ENST00000562039 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-203ENST00000562039 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-203ENST00000562039 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-203ENST00000562039 KIF13BQ9NQT8 1826 aa12.46□□□□□ -0.42
NSMCE1-203ENST00000562039 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-203ENST00000562039 ANXA1P04083 346 aa12.45□□□□□ -0.42
NSMCE1-203ENST00000562039 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
NSMCE1-203ENST00000562039 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
NSMCE1-203ENST00000562039 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
NSMCE1-203ENST00000562039 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
NSMCE1-203ENST00000562039 HLFQ16534 295 aa12.44□□□□□ -0.42
NSMCE1-203ENST00000562039 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-203ENST00000562039 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
NSMCE1-203ENST00000562039 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
NSMCE1-203ENST00000562039 SCN7AQ01118 1682 aa12.43□□□□□ -0.42
NSMCE1-203ENST00000562039 APAF1O14727 1248 aa12.43□□□□□ -0.42
NSMCE1-203ENST00000562039 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
NSMCE1-203ENST00000562039 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
NSMCE1-203ENST00000562039 SETDB2Q96T68 719 aa12.43□□□□□ -0.42
NSMCE1-203ENST00000562039 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
NSMCE1-203ENST00000562039 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
NSMCE1-203ENST00000562039 ZNF622Q969S3 477 aaKnown RBP eCLIP12.42□□□□□ -0.42
NSMCE1-203ENST00000562039 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms