RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
GINS3-204ENST00000561952 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
GINS3-204ENST00000561952 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
GINS3-204ENST00000561952 RPS6KA4O75676 772 aa11.08□□□□□ -0.64
GINS3-204ENST00000561952 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
GINS3-204ENST00000561952 CFAP53Q96M91 514 aa11.08□□□□□ -0.64
GINS3-204ENST00000561952 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
GINS3-204ENST00000561952 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
GINS3-204ENST00000561952 KIF13BQ9NQT8 1826 aa11.07□□□□□ -0.64
GINS3-204ENST00000561952 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
GINS3-204ENST00000561952 GYS1P13807 737 aa11.07□□□□□ -0.64
GINS3-204ENST00000561952 PRKAR2BP31323 418 aa11.07□□□□□ -0.64
GINS3-204ENST00000561952 LHX8Q68G74 356 aa11.07□□□□□ -0.64
GINS3-204ENST00000561952 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
GINS3-204ENST00000561952 PPP2R1AP30153 589 aa11.06□□□□□ -0.64
GINS3-204ENST00000561952 TTC5Q8N0Z6 440 aa11.06□□□□□ -0.64
GINS3-204ENST00000561952 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
GINS3-204ENST00000561952 PARP3Q9Y6F1 533 aa11.06□□□□□ -0.64
GINS3-204ENST00000561952 PXDNLA1KZ92 1463 aa11.06□□□□□ -0.64
GINS3-204ENST00000561952 GNAT3A8MTJ3 354 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 U2AF1L5P0DN76 240 aaPredicted RBP11.05□□□□□ -0.64
GINS3-204ENST00000561952 U2AF1Q01081 240 aaKnown RBP eCLIP11.05□□□□□ -0.64
GINS3-204ENST00000561952 TEFQ10587 303 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 FKBP8Q14318 412 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
GINS3-204ENST00000561952 NLGN1Q8N2Q7 840 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
GINS3-204ENST00000561952 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
GINS3-204ENST00000561952 C10orf71Q711Q0 1435 aa11.04□□□□□ -0.64
GINS3-204ENST00000561952 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
GINS3-204ENST00000561952 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
GINS3-204ENST00000561952 ZNF526Q8TF50 670 aaPredicted RBP11.04□□□□□ -0.64
GINS3-204ENST00000561952 PHACTR3Q96KR7 559 aa11.04□□□□□ -0.64
GINS3-204ENST00000561952 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
GINS3-204ENST00000561952 NUDCQ9Y266 331 aa11.04□□□□□ -0.64
GINS3-204ENST00000561952 ZNF330Q9Y3S2 320 aaPredicted RBP11.04□□□□□ -0.64
GINS3-204ENST00000561952 AFDNP55196 1824 aaKnown RBP11.04□□□□□ -0.64
GINS3-204ENST00000561952 COL15A1P39059 1388 aa11.03□□□□□ -0.64
GINS3-204ENST00000561952 ZPR1O75312 459 aa11.03□□□□□ -0.64
GINS3-204ENST00000561952 CYP19A1P11511 503 aaPredicted RBP11.03□□□□□ -0.64
GINS3-204ENST00000561952 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
GINS3-204ENST00000561952 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
GINS3-204ENST00000561952 BCS1LQ9Y276 419 aa11.03□□□□□ -0.64
GINS3-204ENST00000561952 BRCA1P38398 1863 aaKnown RBP11.03□□□□□ -0.64
GINS3-204ENST00000561952 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
GINS3-204ENST00000561952 ATP10DQ9P241 1426 aa11.02□□□□□ -0.64
GINS3-204ENST00000561952 DLG5Q8TDM6 1919 aa11.02□□□□□ -0.65
GINS3-204ENST00000561952 DPEP1P16444 411 aa11.02□□□□□ -0.65
GINS3-204ENST00000561952 DDR1Q08345 913 aa11.02□□□□□ -0.65
GINS3-204ENST00000561952 KCNQ3O43525 872 aa11.01□□□□□ -0.65
GINS3-204ENST00000561952 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
GINS3-204ENST00000561952 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
GINS3-204ENST00000561952 DCTN1Q14203 1278 aa11.01□□□□□ -0.65
GINS3-204ENST00000561952 MCM10Q7L590 875 aa11.01□□□□□ -0.65
GINS3-204ENST00000561952 ZNF496Q96IT1 587 aaPredicted RBP11.01□□□□□ -0.65
GINS3-204ENST00000561952 HEG1Q9ULI3 1381 aa11.01□□□□□ -0.65
GINS3-204ENST00000561952 BTBD11A6QL63 1104 aa11□□□□□ -0.65
GINS3-204ENST00000561952 FCHSD2O94868 740 aa11□□□□□ -0.65
GINS3-204ENST00000561952 ZNF790Q6PG37 636 aa11□□□□□ -0.65
GINS3-204ENST00000561952 BICDL1Q6ZP65 573 aa11□□□□□ -0.65
GINS3-204ENST00000561952 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
GINS3-204ENST00000561952 SCN7AQ01118 1682 aa11□□□□□ -0.65
GINS3-204ENST00000561952 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
GINS3-204ENST00000561952 STARD3NLO95772 234 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 CHRNA5P30532 468 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
GINS3-204ENST00000561952 TGFB2P61812 414 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 ARFGEF1Q9Y6D6 1849 aa10.99□□□□□ -0.65
GINS3-204ENST00000561952 C1QTNF8P60827 252 aa10.98□□□□□ -0.65
GINS3-204ENST00000561952 NFIXQ14938 502 aa10.98□□□□□ -0.65
GINS3-204ENST00000561952 ARHGAP27Q6ZUM4 889 aa10.98□□□□□ -0.65
GINS3-204ENST00000561952 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
GINS3-204ENST00000561952 NARFQ9UHQ1 456 aa10.98□□□□□ -0.65
GINS3-204ENST00000561952 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
GINS3-204ENST00000561952 CACNA1SQ13698 1873 aa10.98□□□□□ -0.65
GINS3-204ENST00000561952 PRAMEF22A3QJZ6 481 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 A1BGP04217 495 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 CHADLQ6NUI6 762 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 TBC1D2BQ9UPU7 963 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 ADCY9O60503 1353 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 BCORQ6W2J9 1755 aa10.97□□□□□ -0.65
GINS3-204ENST00000561952 CARMIL3Q8ND23 1372 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 NEFMP07197 916 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 KCNA3P22001 575 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 TM4SF1P30408 202 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 NPM2Q86SE8 214 aaKnown RBP10.96□□□□□ -0.65
GINS3-204ENST00000561952 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 MIS18AQ9NYP9 233 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 PIM2Q9P1W9 311 aa10.96□□□□□ -0.65
GINS3-204ENST00000561952 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
GINS3-204ENST00000561952 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
GINS3-204ENST00000561952 SERPINB2P05120 415 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms