RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 AMPD1P23109 780 aa9.11□□□□□ -0.95
PTPN9-202ENST00000561731 MTFR1Q15390 333 aa9.11□□□□□ -0.95
PTPN9-202ENST00000561731 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
PTPN9-202ENST00000561731 CDK2AP1O14519 115 aa9.1□□□□□ -0.95
PTPN9-202ENST00000561731 ATXN7O15265 892 aaPredicted RBP9.1□□□□□ -0.95
PTPN9-202ENST00000561731 ARAFP10398 606 aa9.1□□□□□ -0.95
PTPN9-202ENST00000561731 SKIP12755 728 aa9.1□□□□□ -0.95
PTPN9-202ENST00000561731 ARSJQ5FYB0 599 aaPredicted RBP9.1□□□□□ -0.95
PTPN9-202ENST00000561731 ALYREFQ86V81 257 aaKnown RBP9.1□□□□□ -0.95
PTPN9-202ENST00000561731 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
PTPN9-202ENST00000561731 A0A1W2PNR3 127 aa9.09□□□□□ -0.95
PTPN9-202ENST00000561731 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-202ENST00000561731 ZDHHC3Q9NYG2 299 aa9.09□□□□□ -0.95
PTPN9-202ENST00000561731 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
PTPN9-202ENST00000561731 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-202ENST00000561731 NOD1Q9Y239 953 aa9.09□□□□□ -0.95
PTPN9-202ENST00000561731 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
PTPN9-202ENST00000561731 PIK3R2O00459 728 aa9.08□□□□□ -0.96
PTPN9-202ENST00000561731 BACH1O14867 736 aa9.08□□□□□ -0.96
PTPN9-202ENST00000561731 ITGB2P05107 769 aa9.08□□□□□ -0.96
PTPN9-202ENST00000561731 ZNF295-AS1Q8N0V1 137 aa9.08□□□□□ -0.96
PTPN9-202ENST00000561731 NFATC2IPQ8NCF5 419 aa9.08□□□□□ -0.96
PTPN9-202ENST00000561731 DCDC2BA2VCK2 349 aa9.07□□□□□ -0.96
PTPN9-202ENST00000561731 EPXP11678 715 aa9.07□□□□□ -0.96
PTPN9-202ENST00000561731 GTF2IP78347 998 aa9.07□□□□□ -0.96
PTPN9-202ENST00000561731 PSME1Q06323 249 aa9.07□□□□□ -0.96
PTPN9-202ENST00000561731 GJA3Q9Y6H8 435 aa9.07□□□□□ -0.96
PTPN9-202ENST00000561731 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
PTPN9-202ENST00000561731 NEURL1BA8MQ27 555 aa9.06□□□□□ -0.96
PTPN9-202ENST00000561731 PROCP04070 461 aa9.06□□□□□ -0.96
PTPN9-202ENST00000561731 MAPTP10636 758 aaKnown RBP9.06□□□□□ -0.96
PTPN9-202ENST00000561731 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
PTPN9-202ENST00000561731 ALG2Q9H553 416 aa9.06□□□□□ -0.96
PTPN9-202ENST00000561731 KHNYNO15037 678 aaKnown RBP9.05□□□□□ -0.96
PTPN9-202ENST00000561731 ADH6P28332 368 aa9.05□□□□□ -0.96
PTPN9-202ENST00000561731 TNP2Q05952 138 aa9.05□□□□□ -0.96
PTPN9-202ENST00000561731 NCOA4Q13772 614 aa9.05□□□□□ -0.96
PTPN9-202ENST00000561731 BTBD6Q96KE9 485 aa9.05□□□□□ -0.96
PTPN9-202ENST00000561731 ZIC5Q96T25 663 aa9.05□□□□□ -0.96
PTPN9-202ENST00000561731 AVENQ9NQS1 362 aaPredicted RBP9.05□□□□□ -0.96
PTPN9-202ENST00000561731 KRBA1A5PL33 1030 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 GNB5O14775 395 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 RAD21O60216 631 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 FAM157BP0CG42 384 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 HOXB4P17483 251 aaPredicted RBP9.04□□□□□ -0.96
PTPN9-202ENST00000561731 CD33P20138 364 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 COL8A1P27658 744 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 GRIN2CQ14957 1233 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
PTPN9-202ENST00000561731 LINC00114Q6XXX2 140 aa9.03□□□□□ -0.96
PTPN9-202ENST00000561731 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPN9-202ENST00000561731 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
PTPN9-202ENST00000561731 SCHIP1Q9P0W5 487 aaPredicted RBP9.03□□□□□ -0.96
PTPN9-202ENST00000561731 PARP3Q9Y6F1 533 aa9.03□□□□□ -0.96
PTPN9-202ENST00000561731 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
PTPN9-202ENST00000561731 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
PTPN9-202ENST00000561731 POM121Q96HA1 1249 aa9.02□□□□□ -0.97
PTPN9-202ENST00000561731 ADAM23O75077 832 aa9.01□□□□□ -0.97
PTPN9-202ENST00000561731 DGKGP49619 791 aa9.01□□□□□ -0.97
PTPN9-202ENST00000561731 CHSY3Q70JA7 882 aa9.01□□□□□ -0.97
PTPN9-202ENST00000561731 DEPDC4Q8N2C3 294 aa9.01□□□□□ -0.97
PTPN9-202ENST00000561731 SUV39H2Q9H5I1 410 aa9.01□□□□□ -0.97
PTPN9-202ENST00000561731 NOP53Q9NZM5 478 aaKnown RBP9.01□□□□□ -0.97
PTPN9-202ENST00000561731 HCN2Q9UL51 889 aa9.01□□□□□ -0.97
PTPN9-202ENST00000561731 TXLNAP40222 546 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 LAMC2Q13753 1193 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 TEAD4Q15561 434 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 ZNF468Q5VIY5 522 aaPredicted RBP9□□□□□ -0.97
PTPN9-202ENST00000561731 TRIM50Q86XT4 487 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 ZDHHC1Q8WTX9 485 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 MARK1Q9P0L2 795 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
PTPN9-202ENST00000561731 PRKCSHP14314 528 aaPredicted RBP8.99□□□□□ -0.97
PTPN9-202ENST00000561731 FLIIQ13045 1269 aa8.99□□□□□ -0.97
PTPN9-202ENST00000561731 FCHSD1Q86WN1 690 aa8.99□□□□□ -0.97
PTPN9-202ENST00000561731 SLC9A9Q8IVB4 645 aa8.99□□□□□ -0.97
PTPN9-202ENST00000561731 KLF15Q9UIH9 416 aa8.99□□□□□ -0.97
PTPN9-202ENST00000561731 ZNF232Q9UNY5 417 aa8.99□□□□□ -0.97
PTPN9-202ENST00000561731 EFSO43281 561 aa8.98□□□□□ -0.97
PTPN9-202ENST00000561731 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
PTPN9-202ENST00000561731 NOS2P35228 1153 aa8.98□□□□□ -0.97
PTPN9-202ENST00000561731 EPHA4P54764 986 aa8.98□□□□□ -0.97
PTPN9-202ENST00000561731 BAG6P46379 1132 aa8.97□□□□□ -0.97
PTPN9-202ENST00000561731 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
PTPN9-202ENST00000561731 PCBP4P57723 403 aaKnown RBP8.97□□□□□ -0.97
PTPN9-202ENST00000561731 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
PTPN9-202ENST00000561731 NEUROD4Q9HD90 331 aa8.97□□□□□ -0.97
PTPN9-202ENST00000561731 GPC6Q9Y625 555 aaPredicted RBP8.97□□□□□ -0.97
PTPN9-202ENST00000561731 POM121CA8CG34 1229 aa8.96□□□□□ -0.98
PTPN9-202ENST00000561731 EML1O00423 815 aa8.96□□□□□ -0.98
PTPN9-202ENST00000561731 LRRC69Q6ZNQ3 347 aa8.96□□□□□ -0.98
PTPN9-202ENST00000561731 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
PTPN9-202ENST00000561731 TPCN2Q8NHX9 752 aa8.96□□□□□ -0.98
PTPN9-202ENST00000561731 STRN4Q9NRL3 753 aa8.96□□□□□ -0.98
PTPN9-202ENST00000561731 SERTM1A2A2V5 107 aa8.95□□□□□ -0.98
PTPN9-202ENST00000561731 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
PTPN9-202ENST00000561731 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
PTPN9-202ENST00000561731 K7ELQ4 463 aaPredicted RBP8.95□□□□□ -0.98
PTPN9-202ENST00000561731 TBCELQ5QJ74 424 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms