RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 STARD3NLO95772 234 aa23.88■■□□□ 1.41
FANCA-206ENST00000561660 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
FANCA-206ENST00000561660 CANXP27824 592 aaKnown RBP23.87■■□□□ 1.41
FANCA-206ENST00000561660 USPL1Q5W0Q7 1092 aa23.87■■□□□ 1.41
FANCA-206ENST00000561660 COL15A1P39059 1388 aa23.87■■□□□ 1.41
FANCA-206ENST00000561660 PRAMEF22A3QJZ6 481 aa23.86■■□□□ 1.41
FANCA-206ENST00000561660 NEFMP07197 916 aa23.86■■□□□ 1.41
FANCA-206ENST00000561660 EIF5P55010 431 aaKnown RBP23.86■■□□□ 1.41
FANCA-206ENST00000561660 DDR1Q08345 913 aa23.86■■□□□ 1.41
FANCA-206ENST00000561660 TEX13AQ9BXU3 409 aaPredicted RBP23.86■■□□□ 1.41
FANCA-206ENST00000561660 MIS18AQ9NYP9 233 aa23.86■■□□□ 1.41
FANCA-206ENST00000561660 TAF7Q15545 349 aaPredicted RBP23.85■■□□□ 1.41
FANCA-206ENST00000561660 THUMPD2Q9BTF0 503 aaKnown RBP23.85■■□□□ 1.41
FANCA-206ENST00000561660 PNNQ9H307 717 aaKnown RBP23.85■■□□□ 1.41
FANCA-206ENST00000561660 BCL2L12Q9HB09 334 aa23.85■■□□□ 1.41
FANCA-206ENST00000561660 NARFQ9UHQ1 456 aa23.85■■□□□ 1.41
FANCA-206ENST00000561660 ZPR1O75312 459 aa23.84■■□□□ 1.41
FANCA-206ENST00000561660 A1BGP04217 495 aa23.84■■□□□ 1.41
FANCA-206ENST00000561660 TM4SF1P30408 202 aa23.84■■□□□ 1.41
FANCA-206ENST00000561660 USP16Q9Y5T5 823 aa23.84■■□□□ 1.41
FANCA-206ENST00000561660 MAPK8IP3Q9UPT6 1336 aa23.84■■□□□ 1.41
FANCA-206ENST00000561660 PARP3Q9Y6F1 533 aa23.83■■□□□ 1.41
FANCA-206ENST00000561660 C10orf71Q711Q0 1435 aa23.83■■□□□ 1.4
FANCA-206ENST00000561660 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
FANCA-206ENST00000561660 POLRMTO00411 1230 aaKnown RBP23.81■■□□□ 1.4
FANCA-206ENST00000561660 DLG5Q8TDM6 1919 aa23.8■■□□□ 1.4
FANCA-206ENST00000561660 PXDNLA1KZ92 1463 aa23.8■■□□□ 1.4
FANCA-206ENST00000561660 SNRPA1P09661 255 aaKnown RBP23.79■■□□□ 1.4
FANCA-206ENST00000561660 IL6STP40189 918 aaPredicted RBP23.79■■□□□ 1.4
FANCA-206ENST00000561660 NFIXQ14938 502 aa23.79■■□□□ 1.4
FANCA-206ENST00000561660 CCDC146Q8IYE0 955 aa23.79■■□□□ 1.4
FANCA-206ENST00000561660 ADAMTS8Q9UP79 889 aa23.79■■□□□ 1.4
FANCA-206ENST00000561660 A0A0G2JLW4 131 aa23.78■■□□□ 1.4
FANCA-206ENST00000561660 GRIN3BO60391 1043 aa23.78■■□□□ 1.4
FANCA-206ENST00000561660 TMPOP42166 694 aaKnown RBP23.78■■□□□ 1.4
FANCA-206ENST00000561660 PIP4K2AP48426 406 aaPredicted RBP23.78■■□□□ 1.4
FANCA-206ENST00000561660 RIPK4P57078 832 aa23.78■■□□□ 1.4
FANCA-206ENST00000561660 TGFB2P61812 414 aa23.78■■□□□ 1.4
FANCA-206ENST00000561660 KIF13BQ9NQT8 1826 aa23.77■■□□□ 1.4
FANCA-206ENST00000561660 A0A087WZG4 1122 aa23.77■■□□□ 1.4
FANCA-206ENST00000561660 TBC1D2BQ9UPU7 963 aa23.77■■□□□ 1.4
FANCA-206ENST00000561660 KIAA1551Q9HCM1 1747 aa23.76■■□□□ 1.39
FANCA-206ENST00000561660 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
FANCA-206ENST00000561660 RRP7AQ9Y3A4 280 aaKnown RBP23.76■■□□□ 1.39
FANCA-206ENST00000561660 ZNF330Q9Y3S2 320 aaPredicted RBP23.76■■□□□ 1.39
FANCA-206ENST00000561660 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
FANCA-206ENST00000561660 NBPF26B4DH59 902 aa23.75■■□□□ 1.39
FANCA-206ENST00000561660 DPEP1P16444 411 aa23.75■■□□□ 1.39
FANCA-206ENST00000561660 KCNA3P22001 575 aa23.75■■□□□ 1.39
FANCA-206ENST00000561660 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
FANCA-206ENST00000561660 NBPF10Q6P3W6 841 aaKnown RBP23.75■■□□□ 1.39
FANCA-206ENST00000561660 NBPF15Q8N660 670 aa23.75■■□□□ 1.39
FANCA-206ENST00000561660 EIF4A1P60842 406 aaKnown RBP23.74■■□□□ 1.39
FANCA-206ENST00000561660 CAMTA2O94983 1202 aa23.73■■□□□ 1.39
FANCA-206ENST00000561660 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
FANCA-206ENST00000561660 GIGYF1O75420 1035 aaPredicted RBP23.72■■□□□ 1.39
FANCA-206ENST00000561660 TBC1D9BQ66K14 1250 aa23.72■■□□□ 1.39
FANCA-206ENST00000561660 ZNF784Q8NCA9 323 aaPredicted RBP23.72■■□□□ 1.39
FANCA-206ENST00000561660 CHD4Q14839 1912 aa23.72■■□□□ 1.39
FANCA-206ENST00000561660 KDM3BQ7LBC6 1761 aa23.71■■□□□ 1.39
FANCA-206ENST00000561660 SERPINB2P05120 415 aa23.71■■□□□ 1.39
FANCA-206ENST00000561660 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
FANCA-206ENST00000561660 BICDL1Q6ZP65 573 aa23.71■■□□□ 1.39
FANCA-206ENST00000561660 TRIM35Q9UPQ4 493 aa23.71■■□□□ 1.39
FANCA-206ENST00000561660 N4BP2Q86UW6 1770 aaPredicted RBP23.7■■□□□ 1.39
FANCA-206ENST00000561660 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
FANCA-206ENST00000561660 DZIP3Q86Y13 1208 aaKnown RBP23.69■■□□□ 1.38
FANCA-206ENST00000561660 CHRNA5P30532 468 aa23.68■■□□□ 1.38
FANCA-206ENST00000561660 LMOD3Q0VAK6 560 aa23.67■■□□□ 1.38
FANCA-206ENST00000561660 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
FANCA-206ENST00000561660 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
FANCA-206ENST00000561660 NRXN2Q9P2S2 1712 aa23.67■■□□□ 1.38
FANCA-206ENST00000561660 SCN7AQ01118 1682 aa23.67■■□□□ 1.38
FANCA-206ENST00000561660 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
FANCA-206ENST00000561660 NPM2Q86SE8 214 aaKnown RBP23.65■■□□□ 1.38
FANCA-206ENST00000561660 AFDNP55196 1824 aaKnown RBP23.65■■□□□ 1.38
FANCA-206ENST00000561660 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
FANCA-206ENST00000561660 PIM2Q9P1W9 311 aa23.63■■□□□ 1.37
FANCA-206ENST00000561660 CHL1O00533 1208 aa23.62■■□□□ 1.37
FANCA-206ENST00000561660 PRR5LQ6MZQ0 368 aa23.62■■□□□ 1.37
FANCA-206ENST00000561660 CCDC24Q8N4L8 307 aa23.62■■□□□ 1.37
FANCA-206ENST00000561660 CLEC4GQ6UXB4 293 aa23.61■■□□□ 1.37
FANCA-206ENST00000561660 SETDB2Q96T68 719 aa23.61■■□□□ 1.37
FANCA-206ENST00000561660 BRCA1P38398 1863 aaKnown RBP23.61■■□□□ 1.37
FANCA-206ENST00000561660 LAMB4A4D0S4 1761 aa23.6■■□□□ 1.37
FANCA-206ENST00000561660 BCORQ6W2J9 1755 aa23.6■■□□□ 1.37
FANCA-206ENST00000561660 APAF1O14727 1248 aa23.6■■□□□ 1.37
FANCA-206ENST00000561660 HLFQ16534 295 aa23.6■■□□□ 1.37
FANCA-206ENST00000561660 NGEFQ8N5V2 710 aa23.6■■□□□ 1.37
FANCA-206ENST00000561660 DALRD3Q5D0E6 543 aaKnown RBP23.59■■□□□ 1.37
FANCA-206ENST00000561660 ADCY9O60503 1353 aa23.58■■□□□ 1.37
FANCA-206ENST00000561660 PDIA6Q15084 440 aa23.58■■□□□ 1.37
FANCA-206ENST00000561660 KRT24Q2M2I5 525 aa23.58■■□□□ 1.37
FANCA-206ENST00000561660 TTLL7Q6ZT98 887 aa23.58■■□□□ 1.37
FANCA-206ENST00000561660 LRP10Q7Z4F1 713 aa23.58■■□□□ 1.37
FANCA-206ENST00000561660 RGL2O15211 777 aa23.57■■□□□ 1.36
FANCA-206ENST00000561660 MYL6BP14649 208 aa23.57■■□□□ 1.36
FANCA-206ENST00000561660 ARHGAP27Q6ZUM4 889 aa23.57■■□□□ 1.36
FANCA-206ENST00000561660 C2CD5Q86YS7 1000 aa23.57■■□□□ 1.36
FANCA-206ENST00000561660 BRIP1Q9BX63 1249 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms