RNA–Protein interactions for RNA: ENST00000561233.1

LINS1-213, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-213ENST00000561233 SSFA2P28290 1259 aa9.41□□□□□ -0.9
LINS1-213ENST00000561233 AMIGO3Q86WK7 504 aa9.41□□□□□ -0.9
LINS1-213ENST00000561233 SGIP1Q9BQI5 828 aa9.41□□□□□ -0.9
LINS1-213ENST00000561233 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
LINS1-213ENST00000561233 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
LINS1-213ENST00000561233 ADAMTS7Q9UKP4 1686 aa9.41□□□□□ -0.9
LINS1-213ENST00000561233 CNTNAP4Q9C0A0 1308 aa9.4□□□□□ -0.9
LINS1-213ENST00000561233 IL17REQ8NFR9 667 aa9.4□□□□□ -0.9
LINS1-213ENST00000561233 PNNQ9H307 717 aaKnown RBP9.4□□□□□ -0.9
LINS1-213ENST00000561233 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
LINS1-213ENST00000561233 GALR2O43603 387 aaPredicted RBP9.39□□□□□ -0.91
LINS1-213ENST00000561233 CRKLP46109 303 aaKnown RBP9.39□□□□□ -0.91
LINS1-213ENST00000561233 TRAPPC3LQ5T215 181 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 MCM10Q7L590 875 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 DNAJC10Q8IXB1 793 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 PRKRIP1Q9H875 184 aaPredicted RBP9.39□□□□□ -0.91
LINS1-213ENST00000561233 VIRMAQ69YN4 1812 aaKnown RBP9.39□□□□□ -0.91
LINS1-213ENST00000561233 KCPQ6ZWJ8 1503 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
LINS1-213ENST00000561233 TJP1Q07157 1748 aa9.39□□□□□ -0.91
LINS1-213ENST00000561233 CEMIPQ8WUJ3 1361 aa9.38□□□□□ -0.91
LINS1-213ENST00000561233 BTBD11A6QL63 1104 aa9.38□□□□□ -0.91
LINS1-213ENST00000561233 DCTN1Q14203 1278 aa9.38□□□□□ -0.91
LINS1-213ENST00000561233 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINS1-213ENST00000561233 RC3H1Q5TC82 1133 aaKnown RBP9.38□□□□□ -0.91
LINS1-213ENST00000561233 POTEGQ6S5H5 508 aa9.38□□□□□ -0.91
LINS1-213ENST00000561233 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
LINS1-213ENST00000561233 RPS6KA4O75676 772 aa9.37□□□□□ -0.91
LINS1-213ENST00000561233 RFC4P35249 363 aa9.37□□□□□ -0.91
LINS1-213ENST00000561233 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
LINS1-213ENST00000561233 ZNF496Q96IT1 587 aaPredicted RBP9.37□□□□□ -0.91
LINS1-213ENST00000561233 CCDC87Q9NVE4 849 aa9.37□□□□□ -0.91
LINS1-213ENST00000561233 CICQ96RK0 1608 aaPredicted RBP9.37□□□□□ -0.91
LINS1-213ENST00000561233 HTATSF1O43719 755 aaKnown RBP9.36□□□□□ -0.91
LINS1-213ENST00000561233 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 CCDC146Q8IYE0 955 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 PELP1Q8IZL8 1130 aaKnown RBP9.36□□□□□ -0.91
LINS1-213ENST00000561233 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
LINS1-213ENST00000561233 FMNL2Q96PY5 1086 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 PLEKHF1Q96S99 279 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 UBR2Q8IWV8 1755 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 HEG1Q9ULI3 1381 aa9.36□□□□□ -0.91
LINS1-213ENST00000561233 SIPA1L3O60292 1781 aaPredicted RBP9.35□□□□□ -0.91
LINS1-213ENST00000561233 STARD3NLO95772 234 aa9.35□□□□□ -0.91
LINS1-213ENST00000561233 CYP19A1P11511 503 aaPredicted RBP9.35□□□□□ -0.91
LINS1-213ENST00000561233 CANXP27824 592 aaKnown RBP9.35□□□□□ -0.91
LINS1-213ENST00000561233 COL24A1Q17RW2 1714 aa9.35□□□□□ -0.91
LINS1-213ENST00000561233 INTS5Q6P9B9 1019 aaKnown RBP9.35□□□□□ -0.91
LINS1-213ENST00000561233 ZBTB1Q9Y2K1 713 aa9.35□□□□□ -0.91
LINS1-213ENST00000561233 ZNF330Q9Y3S2 320 aaPredicted RBP9.35□□□□□ -0.91
LINS1-213ENST00000561233 COL15A1P39059 1388 aa9.35□□□□□ -0.91
LINS1-213ENST00000561233 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
LINS1-213ENST00000561233 C4AP0C0L4 1744 aa9.34□□□□□ -0.91
LINS1-213ENST00000561233 KCNQ3O43525 872 aa9.34□□□□□ -0.91
LINS1-213ENST00000561233 MMP10P09238 476 aa9.34□□□□□ -0.91
LINS1-213ENST00000561233 NLGN2Q8NFZ4 835 aa9.34□□□□□ -0.91
LINS1-213ENST00000561233 THUMPD2Q9BTF0 503 aaKnown RBP9.34□□□□□ -0.91
LINS1-213ENST00000561233 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
LINS1-213ENST00000561233 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
LINS1-213ENST00000561233 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 ANP32CO43423 234 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 ZPR1O75312 459 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 GYS1P13807 737 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 RIPK4P57078 832 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 TAF7Q15545 349 aaPredicted RBP9.33□□□□□ -0.92
LINS1-213ENST00000561233 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 GPR162Q16538 588 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
LINS1-213ENST00000561233 NLGN1Q8N2Q7 840 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
LINS1-213ENST00000561233 MIS18AQ9NYP9 233 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
LINS1-213ENST00000561233 USP42Q9H9J4 1324 aaKnown RBP9.32□□□□□ -0.92
LINS1-213ENST00000561233 MYH14Q7Z406 1995 aaKnown RBP9.32□□□□□ -0.92
LINS1-213ENST00000561233 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
LINS1-213ENST00000561233 RUNDC1Q96C34 613 aa9.32□□□□□ -0.92
LINS1-213ENST00000561233 PCDH10Q9P2E7 1040 aa9.32□□□□□ -0.92
LINS1-213ENST00000561233 ADAMTS8Q9UP79 889 aa9.32□□□□□ -0.92
LINS1-213ENST00000561233 CD2APQ9Y5K6 639 aa9.32□□□□□ -0.92
LINS1-213ENST00000561233 DLG5Q8TDM6 1919 aa9.31□□□□□ -0.92
LINS1-213ENST00000561233 PRAMEF22A3QJZ6 481 aa9.31□□□□□ -0.92
LINS1-213ENST00000561233 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
LINS1-213ENST00000561233 TMPOP42166 694 aaKnown RBP9.31□□□□□ -0.92
LINS1-213ENST00000561233 FKBP8Q14318 412 aa9.31□□□□□ -0.92
LINS1-213ENST00000561233 USPL1Q5W0Q7 1092 aa9.31□□□□□ -0.92
LINS1-213ENST00000561233 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
LINS1-213ENST00000561233 TSPYL4Q9UJ04 414 aa9.31□□□□□ -0.92
LINS1-213ENST00000561233 A0A087WZG4 1122 aa9.3□□□□□ -0.92
LINS1-213ENST00000561233 A1BGP04217 495 aa9.3□□□□□ -0.92
LINS1-213ENST00000561233 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
LINS1-213ENST00000561233 CREBZFQ9NS37 354 aa9.3□□□□□ -0.92
LINS1-213ENST00000561233 NARFQ9UHQ1 456 aa9.3□□□□□ -0.92
LINS1-213ENST00000561233 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
LINS1-213ENST00000561233 YY1P25490 414 aa9.29□□□□□ -0.92
LINS1-213ENST00000561233 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
LINS1-213ENST00000561233 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
LINS1-213ENST00000561233 MRS2Q9HD23 443 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms