RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 POLR3GLQ9BT43 218 aa10.09□□□□□ -0.79
GABPB1-211ENST00000561010 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
GABPB1-211ENST00000561010 RTL1A6NKG5 1358 aa10.09□□□□□ -0.79
GABPB1-211ENST00000561010 MTFR1LQ9H019 292 aa10.08□□□□□ -0.8
GABPB1-211ENST00000561010 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
GABPB1-211ENST00000561010 PNPLA7Q6ZV29 1317 aa10.07□□□□□ -0.8
GABPB1-211ENST00000561010 PPM1GO15355 546 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-211ENST00000561010 HOXB1P14653 301 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-211ENST00000561010 SYT17Q9BSW7 474 aa10.07□□□□□ -0.8
GABPB1-211ENST00000561010 C4BP0C0L5 1744 aa10.07□□□□□ -0.8
GABPB1-211ENST00000561010 SMG6Q86US8 1419 aaKnown RBP10.07□□□□□ -0.8
GABPB1-211ENST00000561010 INSRP06213 1382 aa10.06□□□□□ -0.8
GABPB1-211ENST00000561010 FLT4P35916 1363 aa10.06□□□□□ -0.8
GABPB1-211ENST00000561010 SMIM5Q71RC9 77 aa10.05□□□□□ -0.8
GABPB1-211ENST00000561010 RAPGEF4Q8WZA2 1011 aa10.05□□□□□ -0.8
GABPB1-211ENST00000561010 ARXQ96QS3 562 aa10.05□□□□□ -0.8
GABPB1-211ENST00000561010 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
GABPB1-211ENST00000561010 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
GABPB1-211ENST00000561010 UTRNP46939 3433 aa10.05□□□□□ -0.8
GABPB1-211ENST00000561010 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
GABPB1-211ENST00000561010 CYP27B1O15528 508 aa10.04□□□□□ -0.8
GABPB1-211ENST00000561010 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
GABPB1-211ENST00000561010 PDE4AP27815 886 aa10.04□□□□□ -0.8
GABPB1-211ENST00000561010 TNNT2P45379 298 aaPredicted RBP10.04□□□□□ -0.8
GABPB1-211ENST00000561010 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
GABPB1-211ENST00000561010 MSL1Q68DK7 614 aa10.04□□□□□ -0.8
GABPB1-211ENST00000561010 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
GABPB1-211ENST00000561010 MPRIPQ6WCQ1 1025 aa10.03□□□□□ -0.8
GABPB1-211ENST00000561010 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-211ENST00000561010 COL5A3P25940 1745 aaPredicted RBP10.02□□□□□ -0.8
GABPB1-211ENST00000561010 NCAPD2Q15021 1401 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 SCN11AQ9UI33 1791 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 AMIGO3Q86WK7 504 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 COL23A1Q86Y22 540 aaPredicted RBP10.02□□□□□ -0.81
GABPB1-211ENST00000561010 NLGN2Q8NFZ4 835 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 LARP6Q9BRS8 491 aaKnown RBP10.02□□□□□ -0.81
GABPB1-211ENST00000561010 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 PCDH11XQ9BZA7 1347 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 PCDH11YQ9BZA8 1340 aa10.02□□□□□ -0.81
GABPB1-211ENST00000561010 PALLDQ8WX93 1383 aa10.01□□□□□ -0.81
GABPB1-211ENST00000561010 HSPA5P11021 654 aaKnown RBP10.01□□□□□ -0.81
GABPB1-211ENST00000561010 TMC2Q8TDI7 906 aa10.01□□□□□ -0.81
GABPB1-211ENST00000561010 EYA1Q99502 592 aa10.01□□□□□ -0.81
GABPB1-211ENST00000561010 C4AP0C0L4 1744 aa10.01□□□□□ -0.81
GABPB1-211ENST00000561010 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
GABPB1-211ENST00000561010 POLKQ9UBT6 870 aa10□□□□□ -0.81
GABPB1-211ENST00000561010 CGNL1Q0VF96 1302 aa10□□□□□ -0.81
GABPB1-211ENST00000561010 KIF24Q5T7B8 1368 aa10□□□□□ -0.81
GABPB1-211ENST00000561010 POLD1P28340 1107 aa9.99□□□□□ -0.81
GABPB1-211ENST00000561010 GPR162Q16538 588 aa9.99□□□□□ -0.81
GABPB1-211ENST00000561010 ZNF784Q8NCA9 323 aaPredicted RBP9.99□□□□□ -0.81
GABPB1-211ENST00000561010 PIGBQ92521 554 aa9.99□□□□□ -0.81
GABPB1-211ENST00000561010 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
GABPB1-211ENST00000561010 MAP3K5Q99683 1374 aa9.99□□□□□ -0.81
GABPB1-211ENST00000561010 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 PHF14O94880 888 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
GABPB1-211ENST00000561010 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 PANK3Q9H999 370 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 WWC3Q9ULE0 1092 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 WASHC2AQ641Q2 1341 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 KIAA1551Q9HCM1 1747 aa9.98□□□□□ -0.81
GABPB1-211ENST00000561010 TJP1Q07157 1748 aa9.97□□□□□ -0.81
GABPB1-211ENST00000561010 YBX3P16989 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
GABPB1-211ENST00000561010 MFSD10Q14728 455 aa9.97□□□□□ -0.81
GABPB1-211ENST00000561010 LINC00116Q8NCU8 138 aa9.97□□□□□ -0.81
GABPB1-211ENST00000561010 CCER1Q8TC90 406 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-211ENST00000561010 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
GABPB1-211ENST00000561010 BRCA1P38398 1863 aaKnown RBP9.97□□□□□ -0.81
GABPB1-211ENST00000561010 EIF4G2P78344 907 aaKnown RBP eCLIP9.96□□□□□ -0.82
GABPB1-211ENST00000561010 ITPK1Q13572 414 aa9.96□□□□□ -0.82
GABPB1-211ENST00000561010 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
GABPB1-211ENST00000561010 CCDC88AQ3V6T2 1871 aa9.96□□□□□ -0.82
GABPB1-211ENST00000561010 PHKG2P15735 406 aa9.95□□□□□ -0.82
GABPB1-211ENST00000561010 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
GABPB1-211ENST00000561010 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
GABPB1-211ENST00000561010 AK7Q96M32 723 aa9.95□□□□□ -0.82
GABPB1-211ENST00000561010 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
GABPB1-211ENST00000561010 CLSPNQ9HAW4 1339 aa9.95□□□□□ -0.82
GABPB1-211ENST00000561010 ZNF831Q5JPB2 1677 aa9.95□□□□□ -0.82
GABPB1-211ENST00000561010 KDM6AO15550 1401 aaPredicted RBP9.94□□□□□ -0.82
GABPB1-211ENST00000561010 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
GABPB1-211ENST00000561010 C2orf72A6NCS6 295 aa9.94□□□□□ -0.82
GABPB1-211ENST00000561010 SIK1P57059 783 aa9.94□□□□□ -0.82
GABPB1-211ENST00000561010 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
GABPB1-211ENST00000561010 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
GABPB1-211ENST00000561010 TMOD3Q9NYL9 352 aa9.94□□□□□ -0.82
GABPB1-211ENST00000561010 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
GABPB1-211ENST00000561010 IGSF1Q8N6C5 1336 aa9.93□□□□□ -0.82
GABPB1-211ENST00000561010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.93□□□□□ -0.82
GABPB1-211ENST00000561010 E2F4Q16254 413 aa9.93□□□□□ -0.82
GABPB1-211ENST00000561010 IFNL2Q8IZJ0 200 aa9.93□□□□□ -0.82
GABPB1-211ENST00000561010 SMARCC1Q92922 1105 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-211ENST00000561010 ATG3Q9NT62 314 aa9.93□□□□□ -0.82
GABPB1-211ENST00000561010 CICQ96RK0 1608 aaPredicted RBP9.93□□□□□ -0.82
GABPB1-211ENST00000561010 CACNA1SQ13698 1873 aa9.92□□□□□ -0.82
GABPB1-211ENST00000561010 GNPATO15228 680 aa9.92□□□□□ -0.82
GABPB1-211ENST00000561010 ATP6V1AP38606 617 aa9.92□□□□□ -0.82
GABPB1-211ENST00000561010 FOXK1P85037 733 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms