RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 COL15A1P39059 1388 aa26.52■■□□□ 1.84
IPO4-215ENST00000560935 CHD4Q14839 1912 aa26.52■■□□□ 1.84
IPO4-215ENST00000560935 ZPR1O75312 459 aa26.51■■□□□ 1.83
IPO4-215ENST00000560935 NFE2L2Q16236 605 aa26.51■■□□□ 1.83
IPO4-215ENST00000560935 PARP3Q9Y6F1 533 aa26.51■■□□□ 1.83
IPO4-215ENST00000560935 KCNQ3O43525 872 aa26.49■■□□□ 1.83
IPO4-215ENST00000560935 CANXP27824 592 aaKnown RBP26.49■■□□□ 1.83
IPO4-215ENST00000560935 KIF13BQ9NQT8 1826 aa26.49■■□□□ 1.83
IPO4-215ENST00000560935 FKBP8Q14318 412 aa26.48■■□□□ 1.83
IPO4-215ENST00000560935 TAF7Q15545 349 aaPredicted RBP26.47■■□□□ 1.83
IPO4-215ENST00000560935 USPL1Q5W0Q7 1092 aa26.47■■□□□ 1.83
IPO4-215ENST00000560935 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
IPO4-215ENST00000560935 NARFQ9UHQ1 456 aa26.47■■□□□ 1.83
IPO4-215ENST00000560935 GRIN3BO60391 1043 aa26.46■■□□□ 1.83
IPO4-215ENST00000560935 C10orf71Q711Q0 1435 aa26.46■■□□□ 1.83
IPO4-215ENST00000560935 A0A087WZG4 1122 aa26.45■■□□□ 1.82
IPO4-215ENST00000560935 YBX3P16989 372 aaKnown RBP eCLIP26.45■■□□□ 1.82
IPO4-215ENST00000560935 EIF5P55010 431 aaKnown RBP26.43■■□□□ 1.82
IPO4-215ENST00000560935 WDR43Q15061 677 aaKnown RBP eCLIP26.43■■□□□ 1.82
IPO4-215ENST00000560935 PNISRQ8TF01 805 aaKnown RBP26.43■■□□□ 1.82
IPO4-215ENST00000560935 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
IPO4-215ENST00000560935 TGFB2P61812 414 aa26.42■■□□□ 1.82
IPO4-215ENST00000560935 NPM2Q86SE8 214 aaKnown RBP26.42■■□□□ 1.82
IPO4-215ENST00000560935 KDM3BQ7LBC6 1761 aa26.41■■□□□ 1.82
IPO4-215ENST00000560935 UTRNP46939 3433 aa26.41■■□□□ 1.82
IPO4-215ENST00000560935 IL6STP40189 918 aaPredicted RBP26.41■■□□□ 1.82
IPO4-215ENST00000560935 DDR1Q08345 913 aa26.41■■□□□ 1.82
IPO4-215ENST00000560935 ZNF330Q9Y3S2 320 aaPredicted RBP26.41■■□□□ 1.82
IPO4-215ENST00000560935 PXDNLA1KZ92 1463 aa26.41■■□□□ 1.82
IPO4-215ENST00000560935 KIAA1551Q9HCM1 1747 aa26.4■■□□□ 1.82
IPO4-215ENST00000560935 A1BGP04217 495 aa26.4■■□□□ 1.82
IPO4-215ENST00000560935 TM4SF1P30408 202 aa26.4■■□□□ 1.82
IPO4-215ENST00000560935 N4BP2Q86UW6 1770 aaPredicted RBP26.4■■□□□ 1.82
IPO4-215ENST00000560935 MIS18AQ9NYP9 233 aa26.39■■□□□ 1.82
IPO4-215ENST00000560935 USP16Q9Y5T5 823 aa26.39■■□□□ 1.82
IPO4-215ENST00000560935 SCN7AQ01118 1682 aa26.38■■□□□ 1.81
IPO4-215ENST00000560935 POLRMTO00411 1230 aaKnown RBP26.38■■□□□ 1.81
IPO4-215ENST00000560935 RIPK4P57078 832 aa26.38■■□□□ 1.81
IPO4-215ENST00000560935 THUMPD2Q9BTF0 503 aaKnown RBP26.38■■□□□ 1.81
IPO4-215ENST00000560935 WWC3Q9ULE0 1092 aa26.38■■□□□ 1.81
IPO4-215ENST00000560935 PRAMEF22A3QJZ6 481 aa26.37■■□□□ 1.81
IPO4-215ENST00000560935 LMOD3Q0VAK6 560 aa26.37■■□□□ 1.81
IPO4-215ENST00000560935 BCL2L12Q9HB09 334 aa26.37■■□□□ 1.81
IPO4-215ENST00000560935 LAMB4A4D0S4 1761 aa26.36■■□□□ 1.81
IPO4-215ENST00000560935 TMPOP42166 694 aaKnown RBP26.36■■□□□ 1.81
IPO4-215ENST00000560935 NFIXQ14938 502 aa26.36■■□□□ 1.81
IPO4-215ENST00000560935 CCDC146Q8IYE0 955 aa26.35■■□□□ 1.81
IPO4-215ENST00000560935 RUNDC1Q96C34 613 aa26.35■■□□□ 1.81
IPO4-215ENST00000560935 AFDNP55196 1824 aaKnown RBP26.35■■□□□ 1.81
IPO4-215ENST00000560935 GOLGB1Q14789 3259 aaKnown RBP26.34■■□□□ 1.81
IPO4-215ENST00000560935 A0A0G2JLW4 131 aa26.34■■□□□ 1.81
IPO4-215ENST00000560935 ZNF316A6NFI3 1004 aaPredicted RBP26.34■■□□□ 1.81
IPO4-215ENST00000560935 TBC1D2BQ9UPU7 963 aa26.34■■□□□ 1.81
IPO4-215ENST00000560935 DPEP1P16444 411 aa26.33■■□□□ 1.81
IPO4-215ENST00000560935 NRXN2Q9P2S2 1712 aa26.33■■□□□ 1.81
IPO4-215ENST00000560935 ADAMTS8Q9UP79 889 aa26.32■■□□□ 1.8
IPO4-215ENST00000560935 BCORQ6W2J9 1755 aa26.32■■□□□ 1.8
IPO4-215ENST00000560935 PIP4K2AP48426 406 aaPredicted RBP26.31■■□□□ 1.8
IPO4-215ENST00000560935 EIF4A1P60842 406 aaKnown RBP26.31■■□□□ 1.8
IPO4-215ENST00000560935 DZIP3Q86Y13 1208 aaKnown RBP26.31■■□□□ 1.8
IPO4-215ENST00000560935 RRP7AQ9Y3A4 280 aaKnown RBP26.31■■□□□ 1.8
IPO4-215ENST00000560935 BRCA1P38398 1863 aaKnown RBP26.31■■□□□ 1.8
IPO4-215ENST00000560935 SERPINB2P05120 415 aa26.3■■□□□ 1.8
IPO4-215ENST00000560935 BICDL1Q6ZP65 573 aa26.3■■□□□ 1.8
IPO4-215ENST00000560935 ZNF784Q8NCA9 323 aaPredicted RBP26.3■■□□□ 1.8
IPO4-215ENST00000560935 CAMTA2O94983 1202 aa26.29■■□□□ 1.8
IPO4-215ENST00000560935 NEUROD2Q15784 382 aa26.29■■□□□ 1.8
IPO4-215ENST00000560935 TSPYL4Q9UJ04 414 aa26.29■■□□□ 1.8
IPO4-215ENST00000560935 BCS1LQ9Y276 419 aa26.29■■□□□ 1.8
IPO4-215ENST00000560935 GIGYF1O75420 1035 aaPredicted RBP26.28■■□□□ 1.8
IPO4-215ENST00000560935 TBC1D9BQ66K14 1250 aa26.28■■□□□ 1.8
IPO4-215ENST00000560935 NBPF26B4DH59 902 aa26.27■■□□□ 1.8
IPO4-215ENST00000560935 NBPF10Q6P3W6 841 aaKnown RBP26.27■■□□□ 1.8
IPO4-215ENST00000560935 NBPF15Q8N660 670 aa26.27■■□□□ 1.8
IPO4-215ENST00000560935 BABAM1Q9NWV8 329 aa26.27■■□□□ 1.8
IPO4-215ENST00000560935 CARMIL3Q8ND23 1372 aa26.26■■□□□ 1.79
IPO4-215ENST00000560935 PIM2Q9P1W9 311 aa26.26■■□□□ 1.79
IPO4-215ENST00000560935 KCNA3P22001 575 aa26.25■■□□□ 1.79
IPO4-215ENST00000560935 ZNF652Q9Y2D9 606 aa26.25■■□□□ 1.79
IPO4-215ENST00000560935 CHRNA5P30532 468 aa26.24■■□□□ 1.79
IPO4-215ENST00000560935 SETDB2Q96T68 719 aa26.24■■□□□ 1.79
IPO4-215ENST00000560935 ARFGEF1Q9Y6D6 1849 aa26.23■■□□□ 1.79
IPO4-215ENST00000560935 CLEC4GQ6UXB4 293 aa26.23■■□□□ 1.79
IPO4-215ENST00000560935 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
IPO4-215ENST00000560935 DALRD3Q5D0E6 543 aaKnown RBP26.21■■□□□ 1.79
IPO4-215ENST00000560935 DLEC1Q9Y238 1755 aa26.2■■□□□ 1.79
IPO4-215ENST00000560935 RGL2O15211 777 aa26.2■■□□□ 1.78
IPO4-215ENST00000560935 NPHP1O15259 732 aa26.19■■□□□ 1.78
IPO4-215ENST00000560935 PRR5LQ6MZQ0 368 aa26.19■■□□□ 1.78
IPO4-215ENST00000560935 ERBB4Q15303 1308 aa26.18■■□□□ 1.78
IPO4-215ENST00000560935 ANP32CO43423 234 aa26.18■■□□□ 1.78
IPO4-215ENST00000560935 CNBD1Q8NA66 436 aa26.18■■□□□ 1.78
IPO4-215ENST00000560935 ANKRD31Q8N7Z5 1873 aa26.17■■□□□ 1.78
IPO4-215ENST00000560935 ARHGAP27Q6ZUM4 889 aa26.17■■□□□ 1.78
IPO4-215ENST00000560935 C2CD5Q86YS7 1000 aa26.17■■□□□ 1.78
IPO4-215ENST00000560935 NGEFQ8N5V2 710 aa26.17■■□□□ 1.78
IPO4-215ENST00000560935 LAS1LQ9Y4W2 734 aaKnown RBP26.17■■□□□ 1.78
IPO4-215ENST00000560935 H0YIN7 160 aa26.16■■□□□ 1.78
IPO4-215ENST00000560935 MYL6BP14649 208 aa26.16■■□□□ 1.78
IPO4-215ENST00000560935 PDE6BP35913 854 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms