RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 C4BP0C0L5 1744 aa9.08□□□□□ -0.96
USP8-213ENST00000560885 KIF3CO14782 793 aa9.07□□□□□ -0.96
USP8-213ENST00000560885 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
USP8-213ENST00000560885 KHSRPQ92945 711 aaKnown RBP eCLIP9.07□□□□□ -0.961e-6■■□□□ 11.9
USP8-213ENST00000560885 ATP10DQ9P241 1426 aa9.06□□□□□ -0.96
USP8-213ENST00000560885 TOGARAM1Q9Y4F4 1720 aa9.06□□□□□ -0.96
USP8-213ENST00000560885 KIF20BQ96Q89 1820 aa9.06□□□□□ -0.96
USP8-213ENST00000560885 SMG6Q86US8 1419 aaKnown RBP9.05□□□□□ -0.96
USP8-213ENST00000560885 PKD1L3Q7Z443 1732 aa9.05□□□□□ -0.96
USP8-213ENST00000560885 ADCY9O60503 1353 aa9.05□□□□□ -0.96
USP8-213ENST00000560885 NBPF6Q5VWK0 638 aa9.05□□□□□ -0.96
USP8-213ENST00000560885 FBXO22Q8NEZ5 403 aa9.05□□□□□ -0.96
USP8-213ENST00000560885 RAPGEF4Q8WZA2 1011 aa9.05□□□□□ -0.96
USP8-213ENST00000560885 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
USP8-213ENST00000560885 NBPF4Q96M43 638 aa9.05□□□□□ -0.96
USP8-213ENST00000560885 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
USP8-213ENST00000560885 MAP2P11137 1827 aaKnown RBP9.04□□□□□ -0.96
USP8-213ENST00000560885 NUDT7P0C024 238 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 TATP17735 454 aaPredicted RBP9.04□□□□□ -0.96
USP8-213ENST00000560885 FBLN1P23142 703 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 MSL1Q68DK7 614 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 TESK2Q96S53 571 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 NSD3Q9BZ95 1437 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 PCDH11XQ9BZA7 1347 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 PCDH11YQ9BZA8 1340 aa9.04□□□□□ -0.96
USP8-213ENST00000560885 KIF24Q5T7B8 1368 aa9.03□□□□□ -0.96
USP8-213ENST00000560885 PALLDQ8WX93 1383 aa9.03□□□□□ -0.96
USP8-213ENST00000560885 HSPA6P17066 643 aa9.03□□□□□ -0.96
USP8-213ENST00000560885 KIF13BQ9NQT8 1826 aa9.03□□□□□ -0.96
USP8-213ENST00000560885 INSRP06213 1382 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 TK2O00142 265 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 FYB1O15117 783 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 RRS1Q15050 365 aaKnown RBP9.02□□□□□ -0.97
USP8-213ENST00000560885 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 POTEEQ6S8J3 1075 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 MPRIPQ6WCQ1 1025 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 USHBP1Q8N6Y0 703 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 SMARCC1Q92922 1105 aaPredicted RBP9.02□□□□□ -0.97
USP8-213ENST00000560885 LHX6Q9UPM6 363 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 ANKRD26Q9UPS8 1709 aa9.02□□□□□ -0.97
USP8-213ENST00000560885 CICQ96RK0 1608 aaPredicted RBP9.02□□□□□ -0.97
USP8-213ENST00000560885 FLT4P35916 1363 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 ST20-MTHFSA0A0A6YYL1 179 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 AK7Q96M32 723 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 IGSF1Q8N6C5 1336 aa9.01□□□□□ -0.97
USP8-213ENST00000560885 KIAA1551Q9HCM1 1747 aa9□□□□□ -0.97
USP8-213ENST00000560885 N4BP2Q86UW6 1770 aaPredicted RBP9□□□□□ -0.97
USP8-213ENST00000560885 C2orf72A6NCS6 295 aa9□□□□□ -0.97
USP8-213ENST00000560885 CYP27B1O15528 508 aa9□□□□□ -0.97
USP8-213ENST00000560885 SSFA2P28290 1259 aa9□□□□□ -0.97
USP8-213ENST00000560885 GGNBP2Q9H3C7 697 aa9□□□□□ -0.97
USP8-213ENST00000560885 ZNF831Q5JPB2 1677 aa9□□□□□ -0.97
USP8-213ENST00000560885 PCNTO95613 3336 aa8.99□□□□□ -0.97
USP8-213ENST00000560885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
USP8-213ENST00000560885 RGS20O76081 388 aa8.99□□□□□ -0.97
USP8-213ENST00000560885 NKX1-1Q15270 411 aaPredicted RBP8.99□□□□□ -0.97
USP8-213ENST00000560885 HSP90AB2PQ58FF8 381 aa8.99□□□□□ -0.97
USP8-213ENST00000560885 ZNF526Q8TF50 670 aaPredicted RBP8.99□□□□□ -0.97
USP8-213ENST00000560885 BRCA1P38398 1863 aaKnown RBP8.99□□□□□ -0.97
USP8-213ENST00000560885 NCAPD2Q15021 1401 aa8.98□□□□□ -0.97
USP8-213ENST00000560885 AMIGO3Q86WK7 504 aa8.98□□□□□ -0.97
USP8-213ENST00000560885 PIGBQ92521 554 aa8.98□□□□□ -0.97
USP8-213ENST00000560885 SPG7Q9UQ90 795 aa8.98□□□□□ -0.97
USP8-213ENST00000560885 COL5A3P25940 1745 aaPredicted RBP8.97□□□□□ -0.97
USP8-213ENST00000560885 ARFGEF1Q9Y6D6 1849 aa8.97□□□□□ -0.97
USP8-213ENST00000560885 LOC102724428A0A0B4J2F2 783 aa8.97□□□□□ -0.97
USP8-213ENST00000560885 PHF14O94880 888 aa8.97□□□□□ -0.97
USP8-213ENST00000560885 SIK1P57059 783 aa8.97□□□□□ -0.97
USP8-213ENST00000560885 TMF1P82094 1093 aa8.97□□□□□ -0.97
USP8-213ENST00000560885 APLP1P51693 650 aa8.96□□□□□ -0.98
USP8-213ENST00000560885 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
USP8-213ENST00000560885 LINC00116Q8NCU8 138 aa8.96□□□□□ -0.98
USP8-213ENST00000560885 TMOD3Q9NYL9 352 aa8.96□□□□□ -0.98
USP8-213ENST00000560885 WDR90Q96KV7 1748 aa8.96□□□□□ -0.98
USP8-213ENST00000560885 C4AP0C0L4 1744 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 GNPATO15228 680 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 HRO43593 1189 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 TOMM70O94826 608 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 TGFB2P61812 414 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 SMIM5Q71RC9 77 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 MFRPQ9BY79 579 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 PLEKHG2Q9H7P9 1386 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 PXDNLA1KZ92 1463 aa8.95□□□□□ -0.98
USP8-213ENST00000560885 MMP10P09238 476 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 ATP6V1AP38606 617 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 ITPK1Q13572 414 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 IFNL2Q8IZJ0 200 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 NLGN1Q8N2Q7 840 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 ASAP1Q9ULH1 1129 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 EMILIN1Q9Y6C2 1016 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 WASHC2AQ641Q2 1341 aa8.94□□□□□ -0.98
USP8-213ENST00000560885 TRAPPC3LQ5T215 181 aa8.93□□□□□ -0.98
USP8-213ENST00000560885 DNAJC5GQ8N7S2 189 aa8.93□□□□□ -0.98
USP8-213ENST00000560885 RTCBQ9Y3I0 505 aaKnown RBP8.93□□□□□ -0.98
USP8-213ENST00000560885 C10orf71Q711Q0 1435 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms