RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 PHKG2P15735 406 aa10.44□□□□□ -0.74
CPNE6-218ENST00000560845 MTHFSDQ2M296 383 aaKnown RBP10.44□□□□□ -0.74
CPNE6-218ENST00000560845 ATG3Q9NT62 314 aa10.44□□□□□ -0.74
CPNE6-218ENST00000560845 C10orf71Q711Q0 1435 aa10.43□□□□□ -0.74
CPNE6-218ENST00000560845 DLG5Q8TDM6 1919 aa10.43□□□□□ -0.74
CPNE6-218ENST00000560845 PLEKHG2Q9H7P9 1386 aa10.43□□□□□ -0.74
CPNE6-218ENST00000560845 IFNL2Q8IZJ0 200 aa10.43□□□□□ -0.74
CPNE6-218ENST00000560845 THUMPD2Q9BTF0 503 aaKnown RBP10.43□□□□□ -0.74
CPNE6-218ENST00000560845 APLP1P51693 650 aa10.42□□□□□ -0.74
CPNE6-218ENST00000560845 TGFB2P61812 414 aa10.42□□□□□ -0.74
CPNE6-218ENST00000560845 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
CPNE6-218ENST00000560845 IFT57Q9NWB7 429 aa10.42□□□□□ -0.74
CPNE6-218ENST00000560845 BCS1LQ9Y276 419 aa10.42□□□□□ -0.74
CPNE6-218ENST00000560845 RTCBQ9Y3I0 505 aaKnown RBP10.42□□□□□ -0.74
CPNE6-218ENST00000560845 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 A0A0G2JLW4 131 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 HTATSF1O43719 755 aaKnown RBP10.41□□□□□ -0.74
CPNE6-218ENST00000560845 ADRA2BP18089 450 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
CPNE6-218ENST00000560845 GNAI1P63096 354 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 DCTN1Q14203 1278 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 AMOTQ4VCS5 1084 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 PLEKHO1Q53GL0 409 aaPredicted RBP10.41□□□□□ -0.74
CPNE6-218ENST00000560845 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
CPNE6-218ENST00000560845 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
CPNE6-218ENST00000560845 KIF13BQ9NQT8 1826 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 CNTNAP4Q9C0A0 1308 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 GNAT3A8MTJ3 354 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 TOMM70O94826 608 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
CPNE6-218ENST00000560845 MCM10Q7L590 875 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 SLC4A9Q96Q91 983 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 CCDC87Q9NVE4 849 aa10.4□□□□□ -0.74
CPNE6-218ENST00000560845 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
CPNE6-218ENST00000560845 GYS1P13807 737 aa10.39□□□□□ -0.75
CPNE6-218ENST00000560845 DPEP1P16444 411 aa10.39□□□□□ -0.75
CPNE6-218ENST00000560845 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
CPNE6-218ENST00000560845 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
CPNE6-218ENST00000560845 ARHGEF1Q92888 912 aaKnown RBP10.39□□□□□ -0.75
CPNE6-218ENST00000560845 CFAP44Q96MT7 982 aa10.39□□□□□ -0.75
CPNE6-218ENST00000560845 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
CPNE6-218ENST00000560845 NMRK2Q9NPI5 230 aa10.39□□□□□ -0.75
CPNE6-218ENST00000560845 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
CPNE6-218ENST00000560845 LAS1LQ9Y4W2 734 aaKnown RBP10.39□□□□□ -0.75
CPNE6-218ENST00000560845 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 ERVV-2B6SEH9 535 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 HSP90AB1P08238 724 aaKnown RBP10.38□□□□□ -0.75
CPNE6-218ENST00000560845 ZNF853P0CG23 659 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 RFC4P35249 363 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
CPNE6-218ENST00000560845 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 DNAJC5GQ8N7S2 189 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
CPNE6-218ENST00000560845 ZNF831Q5JPB2 1677 aa10.38□□□□□ -0.75
CPNE6-218ENST00000560845 N4BP2Q86UW6 1770 aaPredicted RBP10.37□□□□□ -0.75
CPNE6-218ENST00000560845 RPS6KA4O75676 772 aa10.37□□□□□ -0.75
CPNE6-218ENST00000560845 AKAP4Q5JQC9 854 aa10.37□□□□□ -0.75
CPNE6-218ENST00000560845 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.37□□□□□ -0.75
CPNE6-218ENST00000560845 CEMIPQ8WUJ3 1361 aa10.37□□□□□ -0.75
CPNE6-218ENST00000560845 COL5A3P25940 1745 aaPredicted RBP10.36□□□□□ -0.75
CPNE6-218ENST00000560845 KCNA3P22001 575 aa10.36□□□□□ -0.75
CPNE6-218ENST00000560845 C9orf131Q5VYM1 1079 aa10.36□□□□□ -0.75
CPNE6-218ENST00000560845 RBM46Q8TBY0 533 aaKnown RBP10.36□□□□□ -0.75
CPNE6-218ENST00000560845 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
CPNE6-218ENST00000560845 CHL1O00533 1208 aa10.35□□□□□ -0.75
CPNE6-218ENST00000560845 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
CPNE6-218ENST00000560845 CABP4P57796 275 aa10.35□□□□□ -0.75
CPNE6-218ENST00000560845 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
CPNE6-218ENST00000560845 IL17REQ8NFR9 667 aa10.35□□□□□ -0.75
CPNE6-218ENST00000560845 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
CPNE6-218ENST00000560845 USP42Q9H9J4 1324 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 PTCD1O75127 700 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 CRKLP46109 303 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 DDR1Q08345 913 aa10.34□□□□□ -0.75
CPNE6-218ENST00000560845 DALRD3Q5D0E6 543 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 PIM2Q9P1W9 311 aa10.34□□□□□ -0.75
CPNE6-218ENST00000560845 SRP68Q9UHB9 627 aaKnown RBP10.34□□□□□ -0.75
CPNE6-218ENST00000560845 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 KCPQ6ZWJ8 1503 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 RNMTO43148 476 aaKnown RBP10.33□□□□□ -0.76
CPNE6-218ENST00000560845 PLIN1O60240 522 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 BCAR3O75815 825 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 HTRA3P83110 453 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 TEFQ10587 303 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 FSTL1Q12841 308 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 ZNF428Q96B54 188 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 SMC4Q9NTJ3 1288 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 BABAM1Q9NWV8 329 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 MRC1P22897 1456 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 WDR90Q96KV7 1748 aa10.33□□□□□ -0.76
CPNE6-218ENST00000560845 CHRNA5P30532 468 aa10.32□□□□□ -0.76
CPNE6-218ENST00000560845 TAF7Q15545 349 aaPredicted RBP10.32□□□□□ -0.76
CPNE6-218ENST00000560845 TWISTNBQ3B726 338 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms