RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
PSMA4-221ENST00000560842 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
PSMA4-221ENST00000560842 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
PSMA4-221ENST00000560842 C1orf216Q8TAB5 229 aa9.38□□□□□ -0.91
PSMA4-221ENST00000560842 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
PSMA4-221ENST00000560842 AVENQ9NQS1 362 aaPredicted RBP9.38□□□□□ -0.91
PSMA4-221ENST00000560842 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
PSMA4-221ENST00000560842 ADH6P28332 368 aa9.37□□□□□ -0.91
PSMA4-221ENST00000560842 GATA4P43694 442 aa9.37□□□□□ -0.91
PSMA4-221ENST00000560842 USP4Q13107 963 aa9.37□□□□□ -0.91
PSMA4-221ENST00000560842 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
PSMA4-221ENST00000560842 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
PSMA4-221ENST00000560842 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
PSMA4-221ENST00000560842 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
PSMA4-221ENST00000560842 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
PSMA4-221ENST00000560842 TLR1Q15399 786 aa9.36□□□□□ -0.91
PSMA4-221ENST00000560842 FCHSD1Q86WN1 690 aa9.36□□□□□ -0.91
PSMA4-221ENST00000560842 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
PSMA4-221ENST00000560842 ATP4AP20648 1035 aa9.35□□□□□ -0.91
PSMA4-221ENST00000560842 TNP2Q05952 138 aa9.35□□□□□ -0.91
PSMA4-221ENST00000560842 IRF5Q13568 498 aa9.35□□□□□ -0.91
PSMA4-221ENST00000560842 TSGA10IPQ3SY00 556 aa9.35□□□□□ -0.91
PSMA4-221ENST00000560842 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
PSMA4-221ENST00000560842 MAPTP10636 758 aaKnown RBP9.34□□□□□ -0.91
PSMA4-221ENST00000560842 UBTFP17480 764 aaKnown RBP9.34□□□□□ -0.91
PSMA4-221ENST00000560842 PHTF2Q8N3S3 785 aa9.34□□□□□ -0.91
PSMA4-221ENST00000560842 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
PSMA4-221ENST00000560842 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
PSMA4-221ENST00000560842 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
PSMA4-221ENST00000560842 A6NJR5 290 aa9.33□□□□□ -0.92
PSMA4-221ENST00000560842 SPATA31C1P0DKV0 1188 aa9.33□□□□□ -0.92
PSMA4-221ENST00000560842 RSPO4Q2I0M5 234 aaPredicted RBP9.32□□□□□ -0.92
PSMA4-221ENST00000560842 FNBP4Q8N3X1 1017 aaPredicted RBP9.32□□□□□ -0.92
PSMA4-221ENST00000560842 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
PSMA4-221ENST00000560842 DOLKQ9UPQ8 538 aa9.32□□□□□ -0.92
PSMA4-221ENST00000560842 A0A1W2PNR3 127 aa9.31□□□□□ -0.92
PSMA4-221ENST00000560842 CD33P20138 364 aa9.31□□□□□ -0.92
PSMA4-221ENST00000560842 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
PSMA4-221ENST00000560842 DCDC2BA2VCK2 349 aa9.3□□□□□ -0.92
PSMA4-221ENST00000560842 RAD21O60216 631 aa9.3□□□□□ -0.92
PSMA4-221ENST00000560842 INHAP05111 366 aa9.3□□□□□ -0.92
PSMA4-221ENST00000560842 SCNN1DP51172 638 aa9.3□□□□□ -0.92
PSMA4-221ENST00000560842 NKAPLQ5M9Q1 402 aa9.3□□□□□ -0.92
PSMA4-221ENST00000560842 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
PSMA4-221ENST00000560842 KHNYNO15037 678 aaKnown RBP9.29□□□□□ -0.92
PSMA4-221ENST00000560842 PCBP4P57723 403 aaKnown RBP9.29□□□□□ -0.92
PSMA4-221ENST00000560842 ZNF468Q5VIY5 522 aaPredicted RBP9.29□□□□□ -0.92
PSMA4-221ENST00000560842 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
PSMA4-221ENST00000560842 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
PSMA4-221ENST00000560842 SMTNP53814 917 aa9.28□□□□□ -0.92
PSMA4-221ENST00000560842 GDF10P55107 478 aa9.28□□□□□ -0.92
PSMA4-221ENST00000560842 WASHC4Q2M389 1173 aa9.28□□□□□ -0.92
PSMA4-221ENST00000560842 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
PSMA4-221ENST00000560842 ARSJQ5FYB0 599 aaPredicted RBP9.28□□□□□ -0.92
PSMA4-221ENST00000560842 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
PSMA4-221ENST00000560842 KRTAP1-3Q8IUG1 177 aa9.28□□□□□ -0.92
PSMA4-221ENST00000560842 FAM157BP0CG42 384 aa9.27□□□□□ -0.93
PSMA4-221ENST00000560842 ABL2P42684 1182 aa9.27□□□□□ -0.93
PSMA4-221ENST00000560842 SLFNL1Q499Z3 407 aa9.27□□□□□ -0.93
PSMA4-221ENST00000560842 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.93
PSMA4-221ENST00000560842 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
PSMA4-221ENST00000560842 SPDYE3A6NKU9 549 aa9.26□□□□□ -0.93
PSMA4-221ENST00000560842 EIF4G2P78344 907 aaKnown RBP eCLIP9.26□□□□□ -0.93
PSMA4-221ENST00000560842 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
PSMA4-221ENST00000560842 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
PSMA4-221ENST00000560842 ERICH6Q7L0X2 663 aa9.26□□□□□ -0.93
PSMA4-221ENST00000560842 ZIC5Q96T25 663 aa9.26□□□□□ -0.93
PSMA4-221ENST00000560842 TPSG1Q9NRR2 321 aa9.26□□□□□ -0.93
PSMA4-221ENST00000560842 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
PSMA4-221ENST00000560842 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
PSMA4-221ENST00000560842 ELOA3BQ3SY89 546 aa9.25□□□□□ -0.93
PSMA4-221ENST00000560842 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
PSMA4-221ENST00000560842 ELOA3Q8NG57 546 aa9.25□□□□□ -0.93
PSMA4-221ENST00000560842 ZMYND15Q9H091 742 aa9.25□□□□□ -0.93
PSMA4-221ENST00000560842 ZDHHC3Q9NYG2 299 aa9.25□□□□□ -0.93
PSMA4-221ENST00000560842 SCO2A0A1W2PP80 73 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
PSMA4-221ENST00000560842 ALAS2P22557 587 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 LAMC2Q13753 1193 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 PRRT3Q5FWE3 981 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 SAMD5Q5TGI4 173 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 MDFIQ99750 246 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 MARK1Q9P0L2 795 aa9.24□□□□□ -0.93
PSMA4-221ENST00000560842 CDK2AP1O14519 115 aa9.23□□□□□ -0.93
PSMA4-221ENST00000560842 SLC4A9Q96Q91 983 aa9.23□□□□□ -0.93
PSMA4-221ENST00000560842 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
PSMA4-221ENST00000560842 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
PSMA4-221ENST00000560842 EFSO43281 561 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 DYRK3O43781 588 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 APBA3O96018 575 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 MTFR1Q15390 333 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 ARTNQ5T4W7 220 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 WWC1Q8IX03 1113 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 ZFP64Q9NPA5 681 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
PSMA4-221ENST00000560842 SOX11P35716 441 aa9.21□□□□□ -0.94
PSMA4-221ENST00000560842 VAC14Q08AM6 782 aa9.21□□□□□ -0.94
PSMA4-221ENST00000560842 COL9A3Q14050 684 aaPredicted RBP9.2□□□□□ -0.94
PSMA4-221ENST00000560842 MAP7D1Q3KQU3 841 aa9.2□□□□□ -0.94
PSMA4-221ENST00000560842 SYT9Q86SS6 491 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms