RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731		Q3C1V9	767 aa		10.41	□□□□□ -0.74
MARK3-222	ENST00000560731	CC2D1B	Q5T0F9	858 aa	Known RBP	10.41	□□□□□ -0.74
MARK3-222	ENST00000560731	NLRP13	Q86W25	1043 aa		10.41	□□□□□ -0.74
MARK3-222	ENST00000560731	PNISR	Q8TF01	805 aa	Known RBP	10.41	□□□□□ -0.74
MARK3-222	ENST00000560731	PDZRN3	Q9UPQ7	1066 aa		10.41	□□□□□ -0.74
MARK3-222	ENST00000560731	ANKRD36B	Q8N2N9	1353 aa		10.4	□□□□□ -0.74
MARK3-222	ENST00000560731	KDM4A	O75164	1064 aa		10.4	□□□□□ -0.74
MARK3-222	ENST00000560731	CNGB1	Q14028	1251 aa	Predicted RBP	10.4	□□□□□ -0.74
MARK3-222	ENST00000560731	SPRYD7	Q5W111	196 aa		10.4	□□□□□ -0.74
MARK3-222	ENST00000560731	BRICD5	Q6PL45	260 aa		10.4	□□□□□ -0.74
MARK3-222	ENST00000560731	ZMYND15	Q9H091	742 aa		10.4	□□□□□ -0.74
MARK3-222	ENST00000560731	ZNF598	Q86UK7	904 aa	Known RBP	10.39	□□□□□ -0.75
MARK3-222	ENST00000560731	NUTM1	Q86Y26	1132 aa		10.39	□□□□□ -0.75
MARK3-222	ENST00000560731	TERF2IP	Q9NYB0	399 aa		10.39	□□□□□ -0.75
MARK3-222	ENST00000560731	CABP1	Q9NZU7	370 aa		10.39	□□□□□ -0.75
MARK3-222	ENST00000560731	PPP2R1A	P30153	589 aa		10.38	□□□□□ -0.75
MARK3-222	ENST00000560731	EMID1	Q96A84	441 aa	Predicted RBP	10.38	□□□□□ -0.75
MARK3-222	ENST00000560731	NUDT16	Q96DE0	195 aa	Known RBP	10.38	□□□□□ -0.75
MARK3-222	ENST00000560731	LIMD1	Q9UGP4	676 aa		10.38	□□□□□ -0.75
MARK3-222	ENST00000560731	PTCH1	Q13635	1447 aa		10.38	□□□□□ -0.75
MARK3-222	ENST00000560731	NPHP4	O75161	1426 aa	Predicted RBP	10.37	□□□□□ -0.75
MARK3-222	ENST00000560731	MSS51	Q4VC12	460 aa		10.37	□□□□□ -0.75
MARK3-222	ENST00000560731	LIAT1	Q6ZQX7	453 aa		10.37	□□□□□ -0.75
MARK3-222	ENST00000560731	RIC3	Q7Z5B4	369 aa		10.37	□□□□□ -0.75
MARK3-222	ENST00000560731	FAM160A2	Q8N612	972 aa	Predicted RBP	10.37	□□□□□ -0.75
MARK3-222	ENST00000560731	CGNL1	Q0VF96	1302 aa		10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	NSD3	Q9BZ95	1437 aa		10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	SPTLC1	O15269	473 aa		10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	KCNA6	P17658	529 aa		10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	FAM9B	Q8IZU0	186 aa		10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	CD163L1	Q9NR16	1453 aa		10.36	□□□□□ -0.75
MARK3-222	ENST00000560731	RPIA	P49247	311 aa		10.35	□□□□□ -0.75
MARK3-222	ENST00000560731	TUSC1	Q2TAM9	212 aa		10.35	□□□□□ -0.75
MARK3-222	ENST00000560731	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.35	□□□□□ -0.75
MARK3-222	ENST00000560731	TRAF7	Q6Q0C0	670 aa		10.35	□□□□□ -0.75
MARK3-222	ENST00000560731		A0A1W2PP64	1363 aa		10.35	□□□□□ -0.75
MARK3-222	ENST00000560731	NSD2	O96028	1365 aa		10.35	□□□□□ -0.75
MARK3-222	ENST00000560731	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.35	□□□□□ -0.75
MARK3-222	ENST00000560731	CPSF1	Q10570	1443 aa	Known RBP	10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	XRN1	Q8IZH2	1706 aa	Known RBP	10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	MOXD2P	A6NHM9	499 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	PRR20E	P86478	221 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	PRR20C	P86479	221 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	PRR20D	P86480	221 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	PRR20B	P86481	221 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	PRR20A	P86496	221 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	MCM6	Q14566	821 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	ZNF697	Q5TEC3	545 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	MORC1	Q86VD1	984 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	INSR	P06213	1382 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	ADGRB2	O60241	1585 aa		10.34	□□□□□ -0.75
MARK3-222	ENST00000560731	PRR36	Q9H6K5	1346 aa		10.33	□□□□□ -0.76
MARK3-222	ENST00000560731	USP32	Q8NFA0	1604 aa		10.33	□□□□□ -0.76
MARK3-222	ENST00000560731	FYB1	O15117	783 aa		10.33	□□□□□ -0.76
MARK3-222	ENST00000560731	GJA5	P36382	358 aa		10.33	□□□□□ -0.76
MARK3-222	ENST00000560731	ATP7B	P35670	1465 aa		10.33	□□□□□ -0.76
MARK3-222	ENST00000560731	CHD2	O14647	1828 aa	Known RBP	10.33	□□□□□ -0.76
MARK3-222	ENST00000560731	RFC5	P40937	340 aa		10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	PLA2G2C	Q5R387	149 aa		10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	PPP2R2D	Q66LE6	453 aa		10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	RNF19B	Q6ZMZ0	732 aa		10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	TRIM67	Q6ZTA4	783 aa		10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	PPIP5K1	Q6PFW1	1433 aa		10.32	□□□□□ -0.76
MARK3-222	ENST00000560731	HOXA2	O43364	376 aa		10.31	□□□□□ -0.76
MARK3-222	ENST00000560731	CD2BP2	O95400	341 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-222	ENST00000560731	NDUFV2	P19404	249 aa		10.31	□□□□□ -0.76
MARK3-222	ENST00000560731	USB1	Q9BQ65	265 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-222	ENST00000560731	FCF1	Q9Y324	198 aa	Known RBP	10.31	□□□□□ -0.76
MARK3-222	ENST00000560731	POLR3A	O14802	1390 aa	Predicted RBP	10.29	□□□□□ -0.76
MARK3-222	ENST00000560731	MMP16	P51512	607 aa		10.29	□□□□□ -0.76
MARK3-222	ENST00000560731	EDC4	Q6P2E9	1401 aa	Known RBP	10.29	□□□□□ -0.76
MARK3-222	ENST00000560731	ANKAR	Q7Z5J8	1434 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	HSPA2	P54652	639 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	CSPP1	Q1MSJ5	1256 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	BANK1	Q8NDB2	785 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	GGNBP2	Q9H3C7	697 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	PRDM9	Q9NQV7	894 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	ACE	P12821	1306 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	ZBED9	Q6R2W3	1325 aa		10.28	□□□□□ -0.76
MARK3-222	ENST00000560731	CDC42BPG	Q6DT37	1551 aa		10.27	□□□□□ -0.76
MARK3-222	ENST00000560731	ZBTB24	O43167	697 aa	Predicted RBP	10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	GDF9	O60383	454 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	LILRB3	O75022	631 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	DGAT1	O75907	488 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	MTHFS	P49914	203 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	QPCT	Q16769	361 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	TMEM259	Q4ZIN3	620 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	PROSER2	Q86WR7	435 aa	Predicted RBP	10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	ADAMTS8	Q9UP79	889 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	PCDHB15	Q9Y5E8	787 aa		10.27	□□□□□ -0.77
MARK3-222	ENST00000560731	LMTK3	Q96Q04	1460 aa		10.26	□□□□□ -0.77
MARK3-222	ENST00000560731	SPDYE5	A6NIY4	337 aa		10.26	□□□□□ -0.77
MARK3-222	ENST00000560731	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
MARK3-222	ENST00000560731	TTC21B	Q7Z4L5	1316 aa		10.26	□□□□□ -0.77
MARK3-222	ENST00000560731	NWD1	Q149M9	1564 aa		10.26	□□□□□ -0.77
MARK3-222	ENST00000560731	SSH2	Q76I76	1423 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	ADGRL3	Q9HAR2	1447 aa		10.25	□□□□□ -0.77
MARK3-222	ENST00000560731	NCOA3	Q9Y6Q9	1424 aa		10.25	□□□□□ -0.77

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