RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 KDM3BQ7LBC6 1761 aa9.48□□□□□ -0.89
IDH3A-220ENST00000560667 KIF16BQ96L93 1317 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 NBPF26B4DH59 902 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 FKBP5Q13451 457 aaPredicted RBP9.47□□□□□ -0.89
IDH3A-220ENST00000560667 NBPF14Q5TI25 921 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 NBPF10Q6P3W6 841 aaKnown RBP9.47□□□□□ -0.89
IDH3A-220ENST00000560667 BARGINQ6ZT62 677 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 ARHGAP45Q92619 1136 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 TMOD3Q9NYL9 352 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 THRAP3Q9Y2W1 955 aaKnown RBP9.47□□□□□ -0.89
IDH3A-220ENST00000560667 ABCC4O15439 1325 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 TTC5Q8N0Z6 440 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
IDH3A-220ENST00000560667 STK31Q9BXU1 1019 aa9.47□□□□□ -0.89
IDH3A-220ENST00000560667 PARP4Q9UKK3 1724 aaKnown RBP9.46□□□□□ -0.89
IDH3A-220ENST00000560667 SMIM5Q71RC9 77 aa9.46□□□□□ -0.89
IDH3A-220ENST00000560667 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.89
IDH3A-220ENST00000560667 ATRNO75882 1429 aa9.46□□□□□ -0.9
IDH3A-220ENST00000560667 SNRPA1P09661 255 aaKnown RBP9.46□□□□□ -0.9
IDH3A-220ENST00000560667 DNAJC10Q8IXB1 793 aa9.46□□□□□ -0.9
IDH3A-220ENST00000560667 SIRT2Q8IXJ6 389 aa9.46□□□□□ -0.9
IDH3A-220ENST00000560667 FMNL2Q96PY5 1086 aa9.46□□□□□ -0.9
IDH3A-220ENST00000560667 MEIS3Q99687 375 aa9.46□□□□□ -0.9
IDH3A-220ENST00000560667 KDM2BQ8NHM5 1336 aa9.45□□□□□ -0.9
IDH3A-220ENST00000560667 COPS6Q7L5N1 327 aa9.45□□□□□ -0.9
IDH3A-220ENST00000560667 INTS3Q68E01 1043 aaKnown RBP9.44□□□□□ -0.9
IDH3A-220ENST00000560667 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
IDH3A-220ENST00000560667 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
IDH3A-220ENST00000560667 DBF4Q9UBU7 674 aaPredicted RBP9.44□□□□□ -0.9
IDH3A-220ENST00000560667 GOLGB1Q14789 3259 aaKnown RBP9.44□□□□□ -0.9
IDH3A-220ENST00000560667 MRC1P22897 1456 aa9.44□□□□□ -0.9
IDH3A-220ENST00000560667 SEPT12Q8IYM1 358 aa9.44□□□□□ -0.9
IDH3A-220ENST00000560667 XAGE3Q8WTP9 111 aa9.44□□□□□ -0.9
IDH3A-220ENST00000560667 DDX19BQ9UMR2 479 aa9.44□□□□□ -0.9
IDH3A-220ENST00000560667 GLI3P10071 1580 aa9.44□□□□□ -0.9
IDH3A-220ENST00000560667 ADCY9O60503 1353 aa9.44□□□□□ -0.9
IDH3A-220ENST00000560667 BCL9O00512 1426 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 CWF19L2Q2TBE0 894 aaKnown RBP9.43□□□□□ -0.9
IDH3A-220ENST00000560667 TTLL7Q6ZT98 887 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 DDX21Q9NR30 783 aaKnown RBP eCLIP9.43□□□□□ -0.9
IDH3A-220ENST00000560667 MAP3K2Q9Y2U5 619 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 C5P01031 1676 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 NWD2Q9ULI1 1742 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 PTPRCP08575 1304 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 ONECUT3O60422 494 aaPredicted RBP9.43□□□□□ -0.9
IDH3A-220ENST00000560667 HOXB7P09629 217 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 NBPF7P0C2Y1 421 aaPredicted RBP9.43□□□□□ -0.9
IDH3A-220ENST00000560667 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
IDH3A-220ENST00000560667 USP44Q9H0E7 712 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 BCL11AQ9H165 835 aa9.43□□□□□ -0.9
IDH3A-220ENST00000560667 ITGB4P16144 1822 aa9.42□□□□□ -0.9
IDH3A-220ENST00000560667 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
IDH3A-220ENST00000560667 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
IDH3A-220ENST00000560667 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
IDH3A-220ENST00000560667 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
IDH3A-220ENST00000560667 ITPK1Q13572 414 aa9.41□□□□□ -0.9
IDH3A-220ENST00000560667 CCDC125Q86Z20 511 aa9.41□□□□□ -0.9
IDH3A-220ENST00000560667 PLEKHG2Q9H7P9 1386 aa9.41□□□□□ -0.9
IDH3A-220ENST00000560667 ATP5J2-PTCD1G3V325 749 aa9.41□□□□□ -0.9
IDH3A-220ENST00000560667 IGKV5-2P06315 115 aa9.41□□□□□ -0.9
IDH3A-220ENST00000560667 MS4A1P11836 297 aa9.41□□□□□ -0.9
IDH3A-220ENST00000560667 KSR2Q6VAB6 950 aa9.4□□□□□ -0.9
IDH3A-220ENST00000560667 DNAAF4Q8WXU2 420 aa9.4□□□□□ -0.9
IDH3A-220ENST00000560667 ARXQ96QS3 562 aa9.4□□□□□ -0.9
IDH3A-220ENST00000560667 HYPKQ9NX55 129 aa9.4□□□□□ -0.9
IDH3A-220ENST00000560667 CYP19A1P11511 503 aaPredicted RBP9.4□□□□□ -0.91
IDH3A-220ENST00000560667 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.91
IDH3A-220ENST00000560667 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.91
IDH3A-220ENST00000560667 ZBTB3Q9H5J0 574 aa9.4□□□□□ -0.91
IDH3A-220ENST00000560667 WNK3Q9BYP7 1800 aa9.39□□□□□ -0.91
IDH3A-220ENST00000560667 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
IDH3A-220ENST00000560667 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
IDH3A-220ENST00000560667 RGS3P49796 1198 aa9.39□□□□□ -0.91
IDH3A-220ENST00000560667 RIC3Q7Z5B4 369 aa9.39□□□□□ -0.91
IDH3A-220ENST00000560667 ZBTB1Q9Y2K1 713 aa9.39□□□□□ -0.91
IDH3A-220ENST00000560667 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 MYD88Q99836 296 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 DOT1LQ8TEK3 1739 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 LOC102724428A0A0B4J2F2 783 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
IDH3A-220ENST00000560667 SIK1P57059 783 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 HLFQ16534 295 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 INTS5Q6P9B9 1019 aaKnown RBP9.38□□□□□ -0.91
IDH3A-220ENST00000560667 CENPQQ7L2Z9 268 aaPredicted RBP9.38□□□□□ -0.91
IDH3A-220ENST00000560667 KAZALD1Q96I82 304 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 TBC1D2BQ9UPU7 963 aa9.38□□□□□ -0.91
IDH3A-220ENST00000560667 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
IDH3A-220ENST00000560667 APBB1O00213 710 aa9.37□□□□□ -0.91
IDH3A-220ENST00000560667 CEP85Q6P2H3 762 aa9.37□□□□□ -0.91
IDH3A-220ENST00000560667 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
IDH3A-220ENST00000560667 SYNE4Q8N205 404 aa9.37□□□□□ -0.91
IDH3A-220ENST00000560667 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms