RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 CCDC184Q52MB2 194 aa22.02■■□□□ 1.12
SNX22-204ENST00000560607 ARHGEF1Q92888 912 aaKnown RBP22.02■■□□□ 1.12
SNX22-204ENST00000560607 KDM6AO15550 1401 aaPredicted RBP22.01■■□□□ 1.11
SNX22-204ENST00000560607 RFC4P35249 363 aa22.01■■□□□ 1.11
SNX22-204ENST00000560607 VEGFBP49765 207 aa22.01■■□□□ 1.11
SNX22-204ENST00000560607 CHADLQ6NUI6 762 aa22.01■■□□□ 1.11
SNX22-204ENST00000560607 ADRA2BP18089 450 aa22■■□□□ 1.11
SNX22-204ENST00000560607 ITGB4P16144 1822 aa22■■□□□ 1.11
SNX22-204ENST00000560607 HSPA8P11142 646 aaKnown RBP21.99■■□□□ 1.11
SNX22-204ENST00000560607 EIF4A2Q14240 407 aaKnown RBP21.99■■□□□ 1.11
SNX22-204ENST00000560607 DPY19L2Q6NUT2 758 aa21.99■■□□□ 1.11
SNX22-204ENST00000560607 ASAP1Q9ULH1 1129 aa21.99■■□□□ 1.11
SNX22-204ENST00000560607 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
SNX22-204ENST00000560607 U2SURPO15042 1029 aaKnown RBP21.97■■□□□ 1.11
SNX22-204ENST00000560607 WDR43Q15061 677 aaKnown RBP eCLIP21.97■■□□□ 1.11
SNX22-204ENST00000560607 TMOD3Q9NYL9 352 aa21.97■■□□□ 1.11
SNX22-204ENST00000560607 IL13P35225 146 aa21.95■■□□□ 1.1
SNX22-204ENST00000560607 NKX1-1Q15270 411 aaPredicted RBP21.94■■□□□ 1.1
SNX22-204ENST00000560607 U2AF1L5P0DN76 240 aaPredicted RBP21.92■■□□□ 1.1
SNX22-204ENST00000560607 U2AF1Q01081 240 aaKnown RBP eCLIP21.92■■□□□ 1.1
SNX22-204ENST00000560607 RC3H1Q5TC82 1133 aaKnown RBP21.92■■□□□ 1.1
SNX22-204ENST00000560607 CFAP44Q96MT7 982 aa21.92■■□□□ 1.1
SNX22-204ENST00000560607 TMEM88BA6NKF7 163 aa21.91■■□□□ 1.1
SNX22-204ENST00000560607 RPS6KA4O75676 772 aa21.91■■□□□ 1.1
SNX22-204ENST00000560607 POTEIP0CG38 1075 aa21.91■■□□□ 1.1
SNX22-204ENST00000560607 POTEJP0CG39 1038 aa21.91■■□□□ 1.1
SNX22-204ENST00000560607 FAM9BQ8IZU0 186 aa21.91■■□□□ 1.1
SNX22-204ENST00000560607 ATG3Q9NT62 314 aa21.91■■□□□ 1.1
SNX22-204ENST00000560607 MAP2K1Q02750 393 aaPredicted RBP21.9■■□□□ 1.1
SNX22-204ENST00000560607 DDR1Q08345 913 aa21.9■■□□□ 1.1
SNX22-204ENST00000560607 PASKQ96RG2 1323 aa21.89■■□□□ 1.1
SNX22-204ENST00000560607 PNISRQ8TF01 805 aaKnown RBP21.89■■□□□ 1.09
SNX22-204ENST00000560607 EYA1Q99502 592 aa21.89■■□□□ 1.09
SNX22-204ENST00000560607 HMOX1P09601 288 aa21.88■■□□□ 1.09
SNX22-204ENST00000560607 FKBP8Q14318 412 aa21.88■■□□□ 1.09
SNX22-204ENST00000560607 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
SNX22-204ENST00000560607 CNTNAP4Q9C0A0 1308 aa21.87■■□□□ 1.09
SNX22-204ENST00000560607 TIAM2Q8IVF5 1701 aa21.87■■□□□ 1.09
SNX22-204ENST00000560607 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
SNX22-204ENST00000560607 DLG5Q8TDM6 1919 aa21.86■■□□□ 1.09
SNX22-204ENST00000560607 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
SNX22-204ENST00000560607 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
SNX22-204ENST00000560607 NFKBIEO00221 500 aa21.85■■□□□ 1.09
SNX22-204ENST00000560607 SLC4A9Q96Q91 983 aa21.85■■□□□ 1.09
SNX22-204ENST00000560607 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
SNX22-204ENST00000560607 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
SNX22-204ENST00000560607 KDRP35968 1356 aa21.85■■□□□ 1.09
SNX22-204ENST00000560607 DEFB115Q30KQ5 88 aa21.84■■□□□ 1.09
SNX22-204ENST00000560607 ERFEQ4G0M1 354 aa21.84■■□□□ 1.09
SNX22-204ENST00000560607 TTLL6Q8N841 843 aa21.84■■□□□ 1.09
SNX22-204ENST00000560607 NCAPD2Q15021 1401 aa21.83■■□□□ 1.09
SNX22-204ENST00000560607 POLRMTO00411 1230 aaKnown RBP21.83■■□□□ 1.09
SNX22-204ENST00000560607 LDHDQ86WU2 507 aa21.83■■□□□ 1.09
SNX22-204ENST00000560607 AEBP1Q8IUX7 1158 aa21.83■■□□□ 1.09
SNX22-204ENST00000560607 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
SNX22-204ENST00000560607 WDR33Q9C0J8 1336 aaKnown RBP21.82■■□□□ 1.08
SNX22-204ENST00000560607 RASSF10A6NK89 507 aa21.82■■□□□ 1.08
SNX22-204ENST00000560607 NEFMP07197 916 aa21.82■■□□□ 1.08
SNX22-204ENST00000560607 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
SNX22-204ENST00000560607 BEGAINQ9BUH8 593 aa21.81■■□□□ 1.08
SNX22-204ENST00000560607 CCDC88AQ3V6T2 1871 aa21.81■■□□□ 1.08
SNX22-204ENST00000560607 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
SNX22-204ENST00000560607 ITGBL1O95965 494 aaPredicted RBP21.8■■□□□ 1.08
SNX22-204ENST00000560607 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
SNX22-204ENST00000560607 CCDC146Q8IYE0 955 aa21.8■■□□□ 1.08
SNX22-204ENST00000560607 RSPH6AQ9H0K4 717 aa21.8■■□□□ 1.08
SNX22-204ENST00000560607 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
SNX22-204ENST00000560607 TM4SF1P30408 202 aa21.79■■□□□ 1.08
SNX22-204ENST00000560607 PDE4DIPQ5VU43 2346 aa21.79■■□□□ 1.08
SNX22-204ENST00000560607 IQCA1LA6NCM1 817 aa21.78■■□□□ 1.08
SNX22-204ENST00000560607 IFNL2Q8IZJ0 200 aa21.78■■□□□ 1.08
SNX22-204ENST00000560607 TNRC18O15417 2968 aaPredicted RBP21.77■■□□□ 1.08
SNX22-204ENST00000560607 PHKG2P15735 406 aa21.76■■□□□ 1.07
SNX22-204ENST00000560607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.76■■□□□ 1.07
SNX22-204ENST00000560607 RUNDC1Q96C34 613 aa21.75■■□□□ 1.07
SNX22-204ENST00000560607 MCOLN1Q9GZU1 580 aa21.75■■□□□ 1.07
SNX22-204ENST00000560607 TAF1DQ9H5J8 278 aaPredicted RBP21.75■■□□□ 1.07
SNX22-204ENST00000560607 CRKLP46109 303 aaKnown RBP21.74■■□□□ 1.07
SNX22-204ENST00000560607 C2CD5Q86YS7 1000 aa21.74■■□□□ 1.07
SNX22-204ENST00000560607 ABT1Q9ULW3 272 aaKnown RBP21.74■■□□□ 1.07
SNX22-204ENST00000560607 ZNF831Q5JPB2 1677 aa21.74■■□□□ 1.07
SNX22-204ENST00000560607 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
SNX22-204ENST00000560607 H0YIN7 160 aa21.73■■□□□ 1.07
SNX22-204ENST00000560607 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
SNX22-204ENST00000560607 CLEC11AQ9Y240 323 aa21.73■■□□□ 1.07
SNX22-204ENST00000560607 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
SNX22-204ENST00000560607 ZPR1O75312 459 aa21.72■■□□□ 1.07
SNX22-204ENST00000560607 PLEKHF1Q96S99 279 aa21.72■■□□□ 1.07
SNX22-204ENST00000560607 PLEKHO1Q53GL0 409 aaPredicted RBP21.71■■□□□ 1.07
SNX22-204ENST00000560607 SCN11AQ9UI33 1791 aa21.7■■□□□ 1.06
SNX22-204ENST00000560607 PHACTR3Q96KR7 559 aa21.7■■□□□ 1.06
SNX22-204ENST00000560607 ZNF219Q9P2Y4 722 aaPredicted RBP21.7■■□□□ 1.06
SNX22-204ENST00000560607 TSKSQ9UJT2 592 aa21.7■■□□□ 1.06
SNX22-204ENST00000560607 ERVV-2B6SEH9 535 aa21.69■■□□□ 1.06
SNX22-204ENST00000560607 C21orf2O43822 256 aa21.69■■□□□ 1.06
SNX22-204ENST00000560607 AMOTQ4VCS5 1084 aa21.69■■□□□ 1.06
SNX22-204ENST00000560607 PRPF38BQ5VTL8 546 aaKnown RBP21.69■■□□□ 1.06
SNX22-204ENST00000560607 USPL1Q5W0Q7 1092 aa21.69■■□□□ 1.06
SNX22-204ENST00000560607 L3MBTL3Q96JM7 780 aaPredicted RBP21.69■■□□□ 1.06
SNX22-204ENST00000560607 APAF1O14727 1248 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms