RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
CCDC33-209ENST00000560565 CALD1Q05682 793 aaKnown RBP10.59□□□□□ -0.71
CCDC33-209ENST00000560565 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.59□□□□□ -0.71
CCDC33-209ENST00000560565 DZIP1LQ8IYY4 767 aaKnown RBP10.59□□□□□ -0.71
CCDC33-209ENST00000560565 ZCRB1Q8TBF4 217 aaKnown RBP10.59□□□□□ -0.71
CCDC33-209ENST00000560565 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
CCDC33-209ENST00000560565 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
CCDC33-209ENST00000560565 PLSCR1O15162 318 aa10.58□□□□□ -0.72
CCDC33-209ENST00000560565 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
CCDC33-209ENST00000560565 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
CCDC33-209ENST00000560565 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
CCDC33-209ENST00000560565 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
CCDC33-209ENST00000560565 PTF1AQ7RTS3 328 aa10.58□□□□□ -0.72
CCDC33-209ENST00000560565 SMC5Q8IY18 1101 aa10.58□□□□□ -0.72
CCDC33-209ENST00000560565 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
CCDC33-209ENST00000560565 PPP1R1BQ9UD71 204 aaPredicted RBP10.58□□□□□ -0.72
CCDC33-209ENST00000560565 KCNQ2O43526 872 aa10.57□□□□□ -0.72
CCDC33-209ENST00000560565 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
CCDC33-209ENST00000560565 PDCL3Q9H2J4 239 aa10.57□□□□□ -0.72
CCDC33-209ENST00000560565 MEGF6O75095 1541 aa10.57□□□□□ -0.72
CCDC33-209ENST00000560565 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
CCDC33-209ENST00000560565 MCM5P33992 734 aa10.56□□□□□ -0.72
CCDC33-209ENST00000560565 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
CCDC33-209ENST00000560565 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
CCDC33-209ENST00000560565 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
CCDC33-209ENST00000560565 EYA1Q99502 592 aa10.56□□□□□ -0.72
CCDC33-209ENST00000560565 RRAGDQ9NQL2 400 aaPredicted RBP10.56□□□□□ -0.72
CCDC33-209ENST00000560565 HMOX1P09601 288 aa10.55□□□□□ -0.72
CCDC33-209ENST00000560565 MSNP26038 577 aaKnown RBP10.55□□□□□ -0.72
CCDC33-209ENST00000560565 RIPK4P57078 832 aa10.55□□□□□ -0.72
CCDC33-209ENST00000560565 CLEC17AQ6ZS10 378 aa10.55□□□□□ -0.72
CCDC33-209ENST00000560565 GCC1Q96CN9 775 aa10.55□□□□□ -0.72
CCDC33-209ENST00000560565 HTATSF1O43719 755 aaKnown RBP10.54□□□□□ -0.72
CCDC33-209ENST00000560565 NUCB2P80303 420 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 ALDH1L2Q3SY69 923 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 PKD1L3Q7Z443 1732 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 PANK1Q8TE04 598 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 SYTL4Q96C24 671 aaPredicted RBP10.54□□□□□ -0.72
CCDC33-209ENST00000560565 PKNOX2Q96KN3 472 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 TRIM35Q9UPQ4 493 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
CCDC33-209ENST00000560565 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 SCN11AQ9UI33 1791 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 PCDH11YQ9BZA8 1340 aa10.54□□□□□ -0.72
CCDC33-209ENST00000560565 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 RREB1Q92766 1687 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 PRIM1P49642 420 aaKnown RBP10.53□□□□□ -0.72
CCDC33-209ENST00000560565 NEUROD2Q15784 382 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 BMP2KLQ5H9B9 411 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 PROM2Q8N271 834 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 DNAJC5GQ8N7S2 189 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 BTAF1O14981 1849 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
CCDC33-209ENST00000560565 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 TXNRD1Q16881 649 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 SPON1Q9HCB6 807 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
CCDC33-209ENST00000560565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCDC33-209ENST00000560565 WWC3Q9ULE0 1092 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
CCDC33-209ENST00000560565 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
CCDC33-209ENST00000560565 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.73
CCDC33-209ENST00000560565 CYP27B1O15528 508 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 MFAP1P55081 439 aaKnown RBP10.51□□□□□ -0.73
CCDC33-209ENST00000560565 BRPF1P55201 1214 aaPredicted RBP10.51□□□□□ -0.73
CCDC33-209ENST00000560565 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 ATF7IPQ6VMQ6 1270 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 PPP1R9BQ96SB3 815 aa10.51□□□□□ -0.73
CCDC33-209ENST00000560565 SEC24BO95487 1268 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 DDIT3P35638 169 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 GNAI1P63096 354 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 IFT57Q9NWB7 429 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
CCDC33-209ENST00000560565 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
CCDC33-209ENST00000560565 K7ELQ4 463 aaPredicted RBP10.49□□□□□ -0.73
CCDC33-209ENST00000560565 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
CCDC33-209ENST00000560565 NUCB1Q02818 461 aa10.49□□□□□ -0.73
CCDC33-209ENST00000560565 RABEP1Q15276 862 aa10.49□□□□□ -0.73
CCDC33-209ENST00000560565 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
CCDC33-209ENST00000560565 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
CCDC33-209ENST00000560565 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
CCDC33-209ENST00000560565 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
CCDC33-209ENST00000560565 NKX1-1Q15270 411 aaPredicted RBP10.48□□□□□ -0.73
CCDC33-209ENST00000560565 MPRIPQ6WCQ1 1025 aa10.48□□□□□ -0.73
CCDC33-209ENST00000560565 RTF1Q92541 710 aaKnown RBP10.48□□□□□ -0.73
CCDC33-209ENST00000560565 BABAM1Q9NWV8 329 aa10.48□□□□□ -0.73
CCDC33-209ENST00000560565 STK32BQ9NY57 414 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms