RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 CFAP70Q5T0N1 1121 aa7.53□□□□□ -1.2
TMOD3-207ENST00000560549 TRERF1Q96PN7 1200 aa7.53□□□□□ -1.2
TMOD3-207ENST00000560549 GTF2E1P29083 439 aaPredicted RBP7.52□□□□□ -1.21
TMOD3-207ENST00000560549 TBCELQ5QJ74 424 aa7.52□□□□□ -1.21
TMOD3-207ENST00000560549 CCDC102BQ68D86 513 aa7.52□□□□□ -1.21
TMOD3-207ENST00000560549 TNS4Q8IZW8 715 aa7.52□□□□□ -1.21
TMOD3-207ENST00000560549 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
TMOD3-207ENST00000560549 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
TMOD3-207ENST00000560549 RUBCNLQ9H714 662 aa7.52□□□□□ -1.21
TMOD3-207ENST00000560549 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
TMOD3-207ENST00000560549 CDK2AP1O14519 115 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 FOXK2Q01167 660 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
TMOD3-207ENST00000560549 KANK4Q5T7N3 995 aaPredicted RBP7.51□□□□□ -1.21
TMOD3-207ENST00000560549 SH3PXD2AQ5TCZ1 1133 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 C1orf216Q8TAB5 229 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 KLRG1Q96E93 195 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 LRRC4BQ9NT99 713 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 DNAAF2Q9NVR5 837 aaKnown RBP7.51□□□□□ -1.21
TMOD3-207ENST00000560549 SCHIP1Q9P0W5 487 aaPredicted RBP7.51□□□□□ -1.21
TMOD3-207ENST00000560549 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
TMOD3-207ENST00000560549 SFI1A8K8P3 1242 aa7.5□□□□□ -1.21
TMOD3-207ENST00000560549 SIX5Q8N196 739 aa7.5□□□□□ -1.21
TMOD3-207ENST00000560549 ACDQ96AP0 544 aa7.5□□□□□ -1.21
TMOD3-207ENST00000560549 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
TMOD3-207ENST00000560549 MX2P20592 715 aa7.49□□□□□ -1.21
TMOD3-207ENST00000560549 TRIM50Q86XT4 487 aa7.49□□□□□ -1.21
TMOD3-207ENST00000560549 NIFKQ9BYG3 293 aaKnown RBP7.49□□□□□ -1.21
TMOD3-207ENST00000560549 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
TMOD3-207ENST00000560549 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
TMOD3-207ENST00000560549 TXLNAP40222 546 aa7.49□□□□□ -1.21
TMOD3-207ENST00000560549 SLC9A9Q8IVB4 645 aa7.49□□□□□ -1.21
TMOD3-207ENST00000560549 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
TMOD3-207ENST00000560549 RNF225M0QZC1 329 aaPredicted RBP7.48□□□□□ -1.21
TMOD3-207ENST00000560549 LGR5O75473 907 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 CSB-PGBD3P0DP91 1061 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 BCRP11274 1271 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 ATP1A2P50993 1020 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 PTK7Q13308 1070 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 PGBD3Q8N328 593 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 TSPAN10Q9H1Z9 355 aaPredicted RBP7.48□□□□□ -1.21
TMOD3-207ENST00000560549 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 ATXN7L1Q9ULK2 861 aaPredicted RBP7.48□□□□□ -1.21
TMOD3-207ENST00000560549 PHF24Q9UPV7 400 aa7.48□□□□□ -1.21
TMOD3-207ENST00000560549 BACH1O14867 736 aa7.47□□□□□ -1.21
TMOD3-207ENST00000560549 RASA1P20936 1047 aa7.47□□□□□ -1.21
TMOD3-207ENST00000560549 MAP2K3P46734 347 aa7.47□□□□□ -1.21
TMOD3-207ENST00000560549 EFHC2Q5JST6 749 aa7.47□□□□□ -1.21
TMOD3-207ENST00000560549 NLRP8Q86W28 1048 aa7.47□□□□□ -1.21
TMOD3-207ENST00000560549 NSFL1CQ9UNZ2 370 aaKnown RBP7.47□□□□□ -1.21
TMOD3-207ENST00000560549 USP17L15C9J2P7 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L12C9JPN9 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L21D6R901 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 C21orf2O43822 256 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 MAP3K10Q02779 954 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 RASSF7Q02833 373 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 UNC13AQ9UPW8 1703 aa7.46□□□□□ -1.22
TMOD3-207ENST00000560549 OIP5O43482 229 aa7.45□□□□□ -1.22
TMOD3-207ENST00000560549 BNIP3LO60238 219 aa7.45□□□□□ -1.22
TMOD3-207ENST00000560549 C7orf43Q8WVR3 580 aa7.45□□□□□ -1.22
TMOD3-207ENST00000560549 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
TMOD3-207ENST00000560549 DPYDQ12882 1025 aa7.44□□□□□ -1.22
TMOD3-207ENST00000560549 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
TMOD3-207ENST00000560549 FIGNL1Q6PIW4 674 aa7.44□□□□□ -1.22
TMOD3-207ENST00000560549 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
TMOD3-207ENST00000560549 L3MBTL2Q969R5 705 aa7.44□□□□□ -1.22
TMOD3-207ENST00000560549 SCARF2Q96GP6 870 aaPredicted RBP7.44□□□□□ -1.22
TMOD3-207ENST00000560549 OXCT2Q9BYC2 517 aaPredicted RBP7.44□□□□□ -1.22
TMOD3-207ENST00000560549 ENAMQ9NRM1 1142 aa7.44□□□□□ -1.22
TMOD3-207ENST00000560549 FAM196BA6NMK8 535 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 M0R2N6 131 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 EML1O00423 815 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 C2CD2LO14523 706 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 RFX1P22670 979 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 NOS2P35228 1153 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 TEAD4Q15561 434 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 TMEM151AQ8N4L1 468 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 ABHD17AQ96GS6 310 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
TMOD3-207ENST00000560549 PCDHGC4Q9Y5F7 938 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 FGFR3P22607 806 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 MARSP56192 900 aaKnown RBP7.43□□□□□ -1.22
TMOD3-207ENST00000560549 SRPK2P78362 688 aaKnown RBP7.43□□□□□ -1.22
TMOD3-207ENST00000560549 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 KANK3Q6NY19 840 aa7.43□□□□□ -1.22
TMOD3-207ENST00000560549 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
TMOD3-207ENST00000560549 VRTNQ9H8Y1 702 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms