RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 SCNN1DP51172 638 aa7.47□□□□□ -1.21
SPG11-222ENST00000560435 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPG11-222ENST00000560435 SLFNL1Q499Z3 407 aa7.47□□□□□ -1.21
SPG11-222ENST00000560435 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
SPG11-222ENST00000560435 KLF15Q9UIH9 416 aa7.47□□□□□ -1.21
SPG11-222ENST00000560435 CHIC2Q9UKJ5 165 aa7.47□□□□□ -1.21
SPG11-222ENST00000560435 INHAP05111 366 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 MAPTP10636 758 aaKnown RBP7.46□□□□□ -1.22
SPG11-222ENST00000560435 GDF10P55107 478 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 TNP2Q05952 138 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 OXLD1Q5BKU9 147 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 PSMG3-AS1Q96PY0 264 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 HCN2Q9UL51 889 aa7.46□□□□□ -1.22
SPG11-222ENST00000560435 DCDC2BA2VCK2 349 aa7.45□□□□□ -1.22
SPG11-222ENST00000560435 CD33P20138 364 aa7.45□□□□□ -1.22
SPG11-222ENST00000560435 SEMA6BQ9H3T3 888 aa7.45□□□□□ -1.22
SPG11-222ENST00000560435 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 FAM157BP0CG42 384 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 SMTNP53814 917 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 DOC2BQ14184 412 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 TRIM11Q96F44 468 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 TBC1D2BQ9UPU7 963 aa7.44□□□□□ -1.22
SPG11-222ENST00000560435 KHNYNO15037 678 aaKnown RBP7.43□□□□□ -1.22
SPG11-222ENST00000560435 SPATA31C1P0DKV0 1188 aa7.43□□□□□ -1.22
SPG11-222ENST00000560435 ZNF468Q5VIY5 522 aaPredicted RBP7.43□□□□□ -1.22
SPG11-222ENST00000560435 ZDHHC3Q9NYG2 299 aa7.43□□□□□ -1.22
SPG11-222ENST00000560435 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
SPG11-222ENST00000560435 GATA4P43694 442 aa7.42□□□□□ -1.22
SPG11-222ENST00000560435 ARSJQ5FYB0 599 aaPredicted RBP7.42□□□□□ -1.22
SPG11-222ENST00000560435 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
SPG11-222ENST00000560435 BCANQ96GW7 911 aa7.42□□□□□ -1.22
SPG11-222ENST00000560435 PLVAPQ9BX97 442 aa7.42□□□□□ -1.22
SPG11-222ENST00000560435 IRF5Q13568 498 aa7.41□□□□□ -1.22
SPG11-222ENST00000560435 MTFR1Q15390 333 aa7.41□□□□□ -1.22
SPG11-222ENST00000560435 MAP7D1Q3KQU3 841 aa7.41□□□□□ -1.22
SPG11-222ENST00000560435 ZMYM1Q5SVZ6 1142 aa7.41□□□□□ -1.22
SPG11-222ENST00000560435 ZIC5Q96T25 663 aa7.41□□□□□ -1.22
SPG11-222ENST00000560435 PRM3Q9NNZ6 103 aa7.41□□□□□ -1.22
SPG11-222ENST00000560435 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
SPG11-222ENST00000560435 CDK2AP1O14519 115 aa7.4□□□□□ -1.22
SPG11-222ENST00000560435 PCBP4P57723 403 aaKnown RBP7.4□□□□□ -1.22
SPG11-222ENST00000560435 LAMC2Q13753 1193 aa7.4□□□□□ -1.22
SPG11-222ENST00000560435 SLC4A9Q96Q91 983 aa7.4□□□□□ -1.22
SPG11-222ENST00000560435 PRR12Q9ULL5 1215 aa7.4□□□□□ -1.22
SPG11-222ENST00000560435 TMEM229AB2RXF0 380 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 EFSO43281 561 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 PLPP7Q8NBV4 271 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 KRTAP9-2Q9BYQ4 174 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 MARK1Q9P0L2 795 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 SERTAD1Q9UHV2 236 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 GJA3Q9Y6H8 435 aa7.39□□□□□ -1.23
SPG11-222ENST00000560435 ELOA3CA0A087WX78 387 aaPredicted RBP7.38□□□□□ -1.23
SPG11-222ENST00000560435 A6NJY4 79 aa7.38□□□□□ -1.23
SPG11-222ENST00000560435 SPDYE3A6NKU9 549 aa7.38□□□□□ -1.23
SPG11-222ENST00000560435 ELOA3DA6NLF2 546 aaPredicted RBP7.38□□□□□ -1.23
SPG11-222ENST00000560435 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.38□□□□□ -1.23
SPG11-222ENST00000560435 RSPO4Q2I0M5 234 aaPredicted RBP7.38□□□□□ -1.23
SPG11-222ENST00000560435 ELOA3BQ3SY89 546 aa7.38□□□□□ -1.23
SPG11-222ENST00000560435 ELOA3Q8NG57 546 aa7.38□□□□□ -1.23
SPG11-222ENST00000560435 MDFIQ99750 246 aa7.38□□□□□ -1.23
SPG11-222ENST00000560435 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
SPG11-222ENST00000560435 STRN4Q9NRL3 753 aa7.37□□□□□ -1.23
SPG11-222ENST00000560435 CABP1Q9NZU7 370 aa7.37□□□□□ -1.23
SPG11-222ENST00000560435 USP3Q9Y6I4 520 aa7.37□□□□□ -1.23
SPG11-222ENST00000560435 ALAS2P22557 587 aa7.36□□□□□ -1.23
SPG11-222ENST00000560435 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
SPG11-222ENST00000560435 PRRT3Q5FWE3 981 aa7.36□□□□□ -1.23
SPG11-222ENST00000560435 NKAPLQ5M9Q1 402 aa7.36□□□□□ -1.23
SPG11-222ENST00000560435 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
SPG11-222ENST00000560435 BICDL1Q6ZP65 573 aa7.35□□□□□ -1.23
SPG11-222ENST00000560435 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.23
SPG11-222ENST00000560435 SIN3BO75182 1162 aa7.34□□□□□ -1.23
SPG11-222ENST00000560435 APBA3O96018 575 aa7.34□□□□□ -1.23
SPG11-222ENST00000560435 SYT9Q86SS6 491 aa7.34□□□□□ -1.23
SPG11-222ENST00000560435 PRDM6Q9NQX0 595 aa7.34□□□□□ -1.23
SPG11-222ENST00000560435 TPSG1Q9NRR2 321 aa7.34□□□□□ -1.23
SPG11-222ENST00000560435 WASHC4Q2M389 1173 aa7.33□□□□□ -1.24
SPG11-222ENST00000560435 FOXD4L6Q3SYB3 417 aaPredicted RBP7.33□□□□□ -1.24
SPG11-222ENST00000560435 FOXD4L3Q6VB84 417 aaPredicted RBP7.33□□□□□ -1.24
SPG11-222ENST00000560435 PCDHGA11Q9Y5H2 935 aa7.33□□□□□ -1.24
SPG11-222ENST00000560435 SCO2A0A1W2PP80 73 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 BACH1O14867 736 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 DYRK3O43781 588 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 SOX11P35716 441 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 TXLNAP40222 546 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 ZDHHC1Q8WTX9 485 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 SCHIP1Q9P0W5 487 aaPredicted RBP7.32□□□□□ -1.24
SPG11-222ENST00000560435 GPC6Q9Y625 555 aaPredicted RBP7.32□□□□□ -1.24
SPG11-222ENST00000560435 PARP3Q9Y6F1 533 aa7.32□□□□□ -1.24
SPG11-222ENST00000560435 M0R082 166 aa7.31□□□□□ -1.24
SPG11-222ENST00000560435 SEMA3FQ13275 785 aa7.31□□□□□ -1.24
SPG11-222ENST00000560435 COL9A3Q14050 684 aaPredicted RBP7.31□□□□□ -1.24
SPG11-222ENST00000560435 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
SPG11-222ENST00000560435 TNFRSF25Q93038 417 aa7.31□□□□□ -1.24
SPG11-222ENST00000560435 NACC1Q96RE7 527 aa7.31□□□□□ -1.24
SPG11-222ENST00000560435 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms