RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 RPS6KA4O75676 772 aa19.63■□□□□ 0.73
IDH3A-219ENST00000560414 FCHSD2O94868 740 aa19.63■□□□□ 0.73
IDH3A-219ENST00000560414 CRKLP46109 303 aaKnown RBP19.63■□□□□ 0.73
IDH3A-219ENST00000560414 ARHGEF1Q92888 912 aaKnown RBP19.63■□□□□ 0.73
IDH3A-219ENST00000560414 COL5A3P25940 1745 aaPredicted RBP19.62■□□□□ 0.73
IDH3A-219ENST00000560414 UTRNP46939 3433 aa19.62■□□□□ 0.73
IDH3A-219ENST00000560414 FXR2P51116 673 aaKnown RBP eCLIP19.62■□□□□ 0.73
IDH3A-219ENST00000560414 DNAJC10Q8IXB1 793 aa19.62■□□□□ 0.73
IDH3A-219ENST00000560414 MYH14Q7Z406 1995 aaKnown RBP19.62■□□□□ 0.73
IDH3A-219ENST00000560414 TEFQ10587 303 aa19.61■□□□□ 0.73
IDH3A-219ENST00000560414 TJP1Q07157 1748 aa19.6■□□□□ 0.73
IDH3A-219ENST00000560414 PRKAR2AP13861 404 aaKnown RBP19.6■□□□□ 0.73
IDH3A-219ENST00000560414 CIZ1Q9ULV3 898 aaPredicted RBP19.6■□□□□ 0.73
IDH3A-219ENST00000560414 RFC4P35249 363 aa19.59■□□□□ 0.73
IDH3A-219ENST00000560414 NUBP1P53384 320 aa19.59■□□□□ 0.73
IDH3A-219ENST00000560414 INTS5Q6P9B9 1019 aaKnown RBP19.59■□□□□ 0.73
IDH3A-219ENST00000560414 KCPQ6ZWJ8 1503 aa19.59■□□□□ 0.73
IDH3A-219ENST00000560414 YY1P25490 414 aa19.58■□□□□ 0.72
IDH3A-219ENST00000560414 GPR162Q16538 588 aa19.58■□□□□ 0.72
IDH3A-219ENST00000560414 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.72
IDH3A-219ENST00000560414 GOLGB1Q14789 3259 aaKnown RBP19.57■□□□□ 0.72
IDH3A-219ENST00000560414 CYP19A1P11511 503 aaPredicted RBP19.57■□□□□ 0.72
IDH3A-219ENST00000560414 RALBP1Q15311 655 aa19.57■□□□□ 0.72
IDH3A-219ENST00000560414 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
IDH3A-219ENST00000560414 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
IDH3A-219ENST00000560414 MMP10P09238 476 aa19.56■□□□□ 0.72
IDH3A-219ENST00000560414 GYS1P13807 737 aa19.56■□□□□ 0.72
IDH3A-219ENST00000560414 ZNF790Q6PG37 636 aa19.56■□□□□ 0.72
IDH3A-219ENST00000560414 MCM10Q7L590 875 aa19.56■□□□□ 0.72
IDH3A-219ENST00000560414 CCDC87Q9NVE4 849 aa19.56■□□□□ 0.72
IDH3A-219ENST00000560414 SRP68Q9UHB9 627 aaKnown RBP19.56■□□□□ 0.72
IDH3A-219ENST00000560414 CD2APQ9Y5K6 639 aa19.56■□□□□ 0.72
IDH3A-219ENST00000560414 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
IDH3A-219ENST00000560414 VSIG10Q8N0Z9 540 aa19.55■□□□□ 0.72
IDH3A-219ENST00000560414 NLGN1Q8N2Q7 840 aa19.55■□□□□ 0.72
IDH3A-219ENST00000560414 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
IDH3A-219ENST00000560414 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
IDH3A-219ENST00000560414 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
IDH3A-219ENST00000560414 KCNQ3O43525 872 aa19.54■□□□□ 0.72
IDH3A-219ENST00000560414 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
IDH3A-219ENST00000560414 ECM2O94769 699 aaPredicted RBP19.53■□□□□ 0.72
IDH3A-219ENST00000560414 PIP4P2Q8N4L2 257 aa19.53■□□□□ 0.72
IDH3A-219ENST00000560414 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
IDH3A-219ENST00000560414 ZBTB1Q9Y2K1 713 aa19.53■□□□□ 0.72
IDH3A-219ENST00000560414 FARP1Q9Y4F1 1045 aaPredicted RBP19.52■□□□□ 0.72
IDH3A-219ENST00000560414 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
IDH3A-219ENST00000560414 UBR2Q8IWV8 1755 aa19.52■□□□□ 0.71
IDH3A-219ENST00000560414 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
IDH3A-219ENST00000560414 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
IDH3A-219ENST00000560414 NEFMP07197 916 aa19.51■□□□□ 0.71
IDH3A-219ENST00000560414 YBX3P16989 372 aaKnown RBP eCLIP19.51■□□□□ 0.71
IDH3A-219ENST00000560414 HEG1Q9ULI3 1381 aa19.51■□□□□ 0.71
IDH3A-219ENST00000560414 USP42Q9H9J4 1324 aaKnown RBP19.51■□□□□ 0.71
IDH3A-219ENST00000560414 HTATSF1O43719 755 aaKnown RBP19.5■□□□□ 0.71
IDH3A-219ENST00000560414 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
IDH3A-219ENST00000560414 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
IDH3A-219ENST00000560414 GSE1Q14687 1217 aa19.5■□□□□ 0.71
IDH3A-219ENST00000560414 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
IDH3A-219ENST00000560414 WWC3Q9ULE0 1092 aa19.5■□□□□ 0.71
IDH3A-219ENST00000560414 MYBBP1AQ9BQG0 1328 aaKnown RBP19.5■□□□□ 0.71
IDH3A-219ENST00000560414 STARD3NLO95772 234 aa19.49■□□□□ 0.71
IDH3A-219ENST00000560414 USPL1Q5W0Q7 1092 aa19.49■□□□□ 0.71
IDH3A-219ENST00000560414 ZPR1O75312 459 aa19.48■□□□□ 0.71
IDH3A-219ENST00000560414 DCAF8Q5TAQ9 597 aa19.48■□□□□ 0.71
IDH3A-219ENST00000560414 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
IDH3A-219ENST00000560414 COL15A1P39059 1388 aa19.47■□□□□ 0.71
IDH3A-219ENST00000560414 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
IDH3A-219ENST00000560414 FAM212AQ96EL1 285 aa19.47■□□□□ 0.71
IDH3A-219ENST00000560414 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
IDH3A-219ENST00000560414 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
IDH3A-219ENST00000560414 DDR1Q08345 913 aa19.46■□□□□ 0.71
IDH3A-219ENST00000560414 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
IDH3A-219ENST00000560414 PNNQ9H307 717 aaKnown RBP19.46■□□□□ 0.71
IDH3A-219ENST00000560414 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
IDH3A-219ENST00000560414 A1BGP04217 495 aa19.45■□□□□ 0.7
IDH3A-219ENST00000560414 EIF5P55010 431 aaKnown RBP19.45■□□□□ 0.7
IDH3A-219ENST00000560414 TAF7Q15545 349 aaPredicted RBP19.45■□□□□ 0.7
IDH3A-219ENST00000560414 THUMPD2Q9BTF0 503 aaKnown RBP19.45■□□□□ 0.7
IDH3A-219ENST00000560414 NARFQ9UHQ1 456 aa19.45■□□□□ 0.7
IDH3A-219ENST00000560414 GRIN3BO60391 1043 aa19.44■□□□□ 0.7
IDH3A-219ENST00000560414 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
IDH3A-219ENST00000560414 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
IDH3A-219ENST00000560414 ZNF330Q9Y3S2 320 aaPredicted RBP19.44■□□□□ 0.7
IDH3A-219ENST00000560414 USP16Q9Y5T5 823 aa19.44■□□□□ 0.7
IDH3A-219ENST00000560414 TM4SF1P30408 202 aa19.43■□□□□ 0.7
IDH3A-219ENST00000560414 BCL2L12Q9HB09 334 aa19.43■□□□□ 0.7
IDH3A-219ENST00000560414 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
IDH3A-219ENST00000560414 C10orf71Q711Q0 1435 aa19.42■□□□□ 0.7
IDH3A-219ENST00000560414 A0A0G2JLW4 131 aa19.42■□□□□ 0.7
IDH3A-219ENST00000560414 POLRMTO00411 1230 aaKnown RBP19.42■□□□□ 0.7
IDH3A-219ENST00000560414 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
IDH3A-219ENST00000560414 CHD4Q14839 1912 aa19.41■□□□□ 0.7
IDH3A-219ENST00000560414 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
IDH3A-219ENST00000560414 NFIXQ14938 502 aa19.41■□□□□ 0.7
IDH3A-219ENST00000560414 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
IDH3A-219ENST00000560414 TBC1D2BQ9UPU7 963 aa19.41■□□□□ 0.7
IDH3A-219ENST00000560414 PXDNLA1KZ92 1463 aa19.41■□□□□ 0.7
IDH3A-219ENST00000560414 A0A087WZG4 1122 aa19.4■□□□□ 0.7
IDH3A-219ENST00000560414 DPEP1P16444 411 aa19.4■□□□□ 0.7
IDH3A-219ENST00000560414 IL6STP40189 918 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms