RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	IBTK	Q9P2D0	1353 aa	Predicted RBP	7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369		K7ELQ4	463 aa	Predicted RBP	7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	CWF19L2	Q2TBE0	894 aa	Known RBP	7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	TCHH	Q07283	1943 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	C1orf167	Q5SNV9	1468 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	UBTFL1	P0CB47	393 aa	Predicted RBP	7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	TEF	Q10587	303 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	AKAP4	Q5JQC9	854 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	BEND3	Q5T5X7	828 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	ZGPAT	Q8N5A5	531 aa	Known RBP	7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	KCNH5	Q8NCM2	988 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	JARID2	Q92833	1246 aa	Predicted RBP	7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	RILPL2	Q969X0	211 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	LRRCC1	Q9C099	1032 aa		7.11	□□□□□ -1.27
LRRC49-223	ENST00000560369	SCN11A	Q9UI33	1791 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	XRCC6	P12956	609 aa	Known RBP eCLIP	7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	AIMP1	Q12904	312 aa	Known RBP	7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	PA2G4	Q9UQ80	394 aa	Known RBP	7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	COL18A1	P39060	1754 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	XIRP1	Q702N8	1843 aa	Known RBP	7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	CAMTA1	Q9Y6Y1	1673 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	TRIM6-TRIM34	B2RNG4	842 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	TRAK2	O60296	914 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	HMMR	O75330	724 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	SURF6	O75683	361 aa	Known RBP	7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	GNAI3	P08754	354 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	MX1	P20591	662 aa		7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	NOL8	Q76FK4	1167 aa	Known RBP	7.1	□□□□□ -1.27
LRRC49-223	ENST00000560369	SRGAP3	O43295	1099 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	GIGYF1	O75420	1035 aa	Predicted RBP	7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	SSH3	Q8TE77	659 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	DNAAF4	Q8WXU2	420 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	SRCIN1	Q9C0H9	1055 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	OSBPL3	Q9H4L5	887 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	MAP3K2	Q9Y2U5	619 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	MEGF6	O75095	1541 aa		7.09	□□□□□ -1.27
LRRC49-223	ENST00000560369	HSP90AA1	P07900	732 aa	Known RBP	7.09	□□□□□ -1.28
LRRC49-223	ENST00000560369	RAB3GAP1	Q15042	981 aa		7.09	□□□□□ -1.28
LRRC49-223	ENST00000560369	NLRP2	Q9NX02	1062 aa		7.09	□□□□□ -1.28
LRRC49-223	ENST00000560369	ERBB3	P21860	1342 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	TMEM94	Q12767	1356 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	KDM6A	O15550	1401 aa	Predicted RBP	7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	NCAPD2	Q15021	1401 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	ERC2	O15083	957 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	MYL6B	P14649	208 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	CHML	P26374	656 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	POLA2	Q14181	598 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	PDIA6	Q15084	440 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	C1orf141	Q5JVX7	400 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	L1TD1	Q5T7N2	865 aa	Known RBP	7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	NFATC2IP	Q8NCF5	419 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	KLHDC4	Q8TBB5	520 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	KAZALD1	Q96I82	304 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	ESYT1	Q9BSJ8	1104 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	KAT6B	Q8WYB5	2073 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	MST1R	Q04912	1400 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	GOLGA6L3	A6NEY3	463 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	LARP6	Q9BRS8	491 aa	Known RBP	7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	C19orf44	Q9H6X5	657 aa		7.08	□□□□□ -1.28
LRRC49-223	ENST00000560369	PXDNL	A1KZ92	1463 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	COL9A3	Q14050	684 aa	Predicted RBP	7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	GAS2L3	Q86XJ1	694 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	PI4K2B	Q8TCG2	481 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	RHPN1	Q8TCX5	695 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	BABAM1	Q9NWV8	329 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	ADAMTS7	Q9UKP4	1686 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	HEG1	Q9ULI3	1381 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	ZDHHC9	Q9Y397	364 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	AFDN	P55196	1824 aa	Known RBP	7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	UPF3B	Q9BZI7	483 aa	Known RBP	7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	ANO2	Q9NQ90	1003 aa		7.07	□□□□□ -1.28
LRRC49-223	ENST00000560369	KIF1A	Q12756	1690 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	CYP27B1	O15528	508 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	NEK4	P51957	841 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	RABEP1	Q15276	862 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	EPHA10	Q5JZY3	1008 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	SUCLG2	Q96I99	432 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	STAP2	Q9UGK3	403 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	USP16	Q9Y5T5	823 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	IGKV5-2	P06315	115 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	CPA1	P15085	419 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	AMOT	Q4VCS5	1084 aa		7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	DDX54	Q8TDD1	881 aa	Known RBP	7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	ZNF496	Q96IT1	587 aa	Predicted RBP	7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	TLR7	Q9NYK1	1049 aa	Known RBP	7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	DBF4	Q9UBU7	674 aa	Predicted RBP	7.06	□□□□□ -1.28
LRRC49-223	ENST00000560369	FSD2	A1L4K1	749 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	PHKG2	P15735	406 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	ATF3	P18847	181 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	KSR2	Q6VAB6	950 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	SIL1	Q9H173	461 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	SPG7	Q9UQ90	795 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	BAG4	O95429	457 aa	Known RBP	7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	CHGB	P05060	677 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	CSB-PGBD3	P0DP91	1061 aa		7.05	□□□□□ -1.28
LRRC49-223	ENST00000560369	ZNF790	Q6PG37	636 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms